Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0604
         (728 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8XMD6 Cluster: Putative uncharacterized protein CPE075...    35   1.8  
UniRef50_Q5BKT4 Cluster: Alpha-1,2-glucosyltransferase ALG10-A; ...    34   3.1  
UniRef50_A0L8Z7 Cluster: Putative uncharacterized protein; n=1; ...    34   4.1  
UniRef50_A0M4I1 Cluster: Putative uncharacterized protein; n=1; ...    33   9.5  

>UniRef50_Q8XMD6 Cluster: Putative uncharacterized protein CPE0753;
           n=1; Clostridium perfringens|Rep: Putative
           uncharacterized protein CPE0753 - Clostridium
           perfringens
          Length = 314

 Score = 35.1 bits (77), Expect = 1.8
 Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
 Frame = +1

Query: 361 IIHKSVLITKHNDYIICSYYGRLKILNASFSVSS---FTLRNLLFVNISKFEGDVSRISH 531
           I   + + TK+N YI  +Y  +L  +N+SF  S+   F  RN+L VN  +    +  I+ 
Sbjct: 155 ICEPNSIYTKYNAYIYVNYDLKLLEINSSFKKSNIREFEFRNILMVNEYEILEKIRNINE 214

Query: 532 IMVHHFLTTTL*LKIFNY 585
           I     L +++   + NY
Sbjct: 215 ISEESKLESSVYFLLMNY 232


>UniRef50_Q5BKT4 Cluster: Alpha-1,2-glucosyltransferase ALG10-A;
           n=21; Euteleostomi|Rep: Alpha-1,2-glucosyltransferase
           ALG10-A - Homo sapiens (Human)
          Length = 473

 Score = 34.3 bits (75), Expect = 3.1
 Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
 Frame = +1

Query: 340 GLNLV-F*IIHKSVLITKHNDYIICSYYGRLKILNASFSVSSFTLRNLLFVNISKFEGDV 516
           GL LV   +I  ++ I   +++++CS  G L+ +N  FSV +F L  LLF  +       
Sbjct: 67  GLYLVSIGVIKPAIWIFGWSEHVVCSI-GMLRFVNLLFSVGNFYLLYLLFCKVQPRNKAA 125

Query: 517 SRISHIMVHHFLTTTL*LKIFNY 585
           S I  ++    L     L  FN+
Sbjct: 126 SSIQRVLSTLTLAVFPTLYFFNF 148


>UniRef50_A0L8Z7 Cluster: Putative uncharacterized protein; n=1;
           Magnetococcus sp. MC-1|Rep: Putative uncharacterized
           protein - Magnetococcus sp. (strain MC-1)
          Length = 121

 Score = 33.9 bits (74), Expect = 4.1
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = -2

Query: 64  LHGRNRTGWWYLPVRLQP 11
           LH RN+TGWW LP+ L P
Sbjct: 67  LHDRNKTGWWLLPMLLIP 84


>UniRef50_A0M4I1 Cluster: Putative uncharacterized protein; n=1;
           Gramella forsetii KT0803|Rep: Putative uncharacterized
           protein - Gramella forsetii (strain KT0803)
          Length = 164

 Score = 32.7 bits (71), Expect = 9.5
 Identities = 17/38 (44%), Positives = 25/38 (65%)
 Frame = +2

Query: 221 ALIFDPPFFKYRIWQTMQLKKKFLSCHTSTSNEVVLAS 334
           AL+F+PP  K+  W TM LK+KF+    + S +VVL +
Sbjct: 77  ALLFNPPLSKHP-WSTMHLKEKFV--RGNASKQVVLGA 111


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 701,675,237
Number of Sequences: 1657284
Number of extensions: 13467009
Number of successful extensions: 29114
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 27865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29109
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 58853922985
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)