Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0604
         (728 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC090948-1|AAH90948.1|  473|Homo sapiens ALG10 protein protein.        34   0.45 
BC070347-1|AAH70347.1|  473|Homo sapiens ALG10 protein protein.        34   0.45 
AJ312278-1|CAC41349.1|  473|Homo sapiens alpha2-glucosyltransfer...    34   0.45 
AY845858-1|AAW31756.1|  473|Homo sapiens KCR1 protein.                 33   1.4  

>BC090948-1|AAH90948.1|  473|Homo sapiens ALG10 protein protein.
          Length = 473

 Score = 34.3 bits (75), Expect = 0.45
 Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
 Frame = +1

Query: 340 GLNLV-F*IIHKSVLITKHNDYIICSYYGRLKILNASFSVSSFTLRNLLFVNISKFEGDV 516
           GL LV   +I  ++ I   +++++CS  G L+ +N  FSV +F L  LLF  +       
Sbjct: 67  GLYLVSIGVIKPAIWIFGWSEHVVCSI-GMLRFVNLLFSVGNFYLLYLLFCKVQPRNKAA 125

Query: 517 SRISHIMVHHFLTTTL*LKIFNY 585
           S I  ++    L     L  FN+
Sbjct: 126 SSIQRVLSTLTLAVFPTLYFFNF 148


>BC070347-1|AAH70347.1|  473|Homo sapiens ALG10 protein protein.
          Length = 473

 Score = 34.3 bits (75), Expect = 0.45
 Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
 Frame = +1

Query: 340 GLNLV-F*IIHKSVLITKHNDYIICSYYGRLKILNASFSVSSFTLRNLLFVNISKFEGDV 516
           GL LV   +I  ++ I   +++++CS  G L+ +N  FSV +F L  LLF  +       
Sbjct: 67  GLYLVSIGVIKPAIWIFGWSEHVVCSI-GMLRFVNLLFSVGNFYLLYLLFCKVQPRNKAA 125

Query: 517 SRISHIMVHHFLTTTL*LKIFNY 585
           S I  ++    L     L  FN+
Sbjct: 126 SSIQRVLSTLTLAVFPTLYFFNF 148


>AJ312278-1|CAC41349.1|  473|Homo sapiens alpha2-glucosyltransferase
           protein.
          Length = 473

 Score = 34.3 bits (75), Expect = 0.45
 Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
 Frame = +1

Query: 340 GLNLV-F*IIHKSVLITKHNDYIICSYYGRLKILNASFSVSSFTLRNLLFVNISKFEGDV 516
           GL LV   +I  ++ I   +++++CS  G L+ +N  FSV +F L  LLF  +       
Sbjct: 67  GLYLVSIGVIKPAIWIFGWSEHVVCSI-GMLRFVNLLFSVGNFYLLYLLFCKVQPRNKAA 125

Query: 517 SRISHIMVHHFLTTTL*LKIFNY 585
           S I  ++    L     L  FN+
Sbjct: 126 SSIQRVLSTLTLAVFPTLYFFNF 148


>AY845858-1|AAW31756.1|  473|Homo sapiens KCR1 protein.
          Length = 473

 Score = 32.7 bits (71), Expect = 1.4
 Identities = 20/75 (26%), Positives = 36/75 (48%)
 Frame = +1

Query: 361 IIHKSVLITKHNDYIICSYYGRLKILNASFSVSSFTLRNLLFVNISKFEGDVSRISHIMV 540
           ++  ++ I   +++++CS  G L+ +N  FSV +F L  LLF  +       S I  ++ 
Sbjct: 75  VVKPAIWIFGWSEHVVCSI-GMLRFVNLLFSVGNFYLLYLLFHKVQPRNKAASSIQRVLS 133

Query: 541 HHFLTTTL*LKIFNY 585
              L     L  FN+
Sbjct: 134 TLTLAVFPTLYFFNF 148


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,128,606
Number of Sequences: 237096
Number of extensions: 1954191
Number of successful extensions: 2963
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2963
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8623170556
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)