Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0603
         (622 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase...    48   3e-07
U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase...    46   1e-06
U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase...    45   2e-06
U89804-1|AAD03795.1|   89|Anopheles gambiae Tc1-like transposase...    29   0.16 
Y17699-1|CAA76819.1|   81|Anopheles gambiae hypothetical protein...    25   1.5  
AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.      25   2.6  
AF457549-1|AAL68779.1|  257|Anopheles gambiae antigen 5-related ...    25   2.6  
U50472-1|AAA93475.1|  141|Anopheles gambiae protein ( Anopheles ...    24   3.4  
L10441-1|AAA29361.1|  154|Anopheles gambiae transposase protein.       24   3.4  
L10438-1|AAA29359.1|  154|Anopheles gambiae transposase protein.       24   3.4  
AJ304412-1|CAC39105.1|  196|Anopheles gambiae dynamin protein.         23   7.8  

>U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 250

 Score = 47.6 bits (108), Expect = 3e-07
 Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
 Frame = -2

Query: 252 SHTMFN-NRHWVFQQDSAPAHRAKSTQDWLAAREIDFIRHEDWPSSSPDLNPLDYMIWQH 76
           SH   N  R W+F QD+   H + + Q WLA   +  ++   WP+ SPDLNP++  +W  
Sbjct: 139 SHARKNLPRSWMFMQDNDSKHTSGTVQTWLADNNVKTMK---WPALSPDLNPIE-NLWAI 194

Query: 75  LEEKACSNPHPNLESL 28
            +++   N   +L+ L
Sbjct: 195 FKKRLGKNIPEDLDHL 210


>U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 332

 Score = 45.6 bits (103), Expect = 1e-06
 Identities = 20/72 (27%), Positives = 42/72 (58%)
 Frame = -2

Query: 237 NNRHWVFQQDSAPAHRAKSTQDWLAAREIDFIRHEDWPSSSPDLNPLDYMIWQHLEEKAC 58
           +  H++FQ D+   H +++ + +LA +++  +    WP+ SPDLNP++  +W  L+ +  
Sbjct: 227 DEEHYIFQHDNDSKHTSRTVKCYLANQDVQVL---PWPALSPDLNPIE-NLWSTLKRQLK 282

Query: 57  SNPHPNLESLKT 22
           + P  + + L T
Sbjct: 283 NQPARSADDLWT 294


>U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 260

 Score = 45.2 bits (102), Expect = 2e-06
 Identities = 20/72 (27%), Positives = 41/72 (56%)
 Frame = -2

Query: 237 NNRHWVFQQDSAPAHRAKSTQDWLAAREIDFIRHEDWPSSSPDLNPLDYMIWQHLEEKAC 58
           +  H++FQ D+   H +++ + +LA +++  +    WP+ SPDLNP++  +W  L+    
Sbjct: 155 DEEHYIFQHDNDSKHTSRTVKCYLANQDVQVL---PWPALSPDLNPIE-NLWSTLKRHVK 210

Query: 57  SNPHPNLESLKT 22
           + P  + + L T
Sbjct: 211 NQPARSADDLWT 222


>U89804-1|AAD03795.1|   89|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 89

 Score = 28.7 bits (61), Expect = 0.16
 Identities = 12/44 (27%), Positives = 20/44 (45%)
 Frame = -2

Query: 225 WVFQQDSAPAHRAKSTQDWLAAREIDFIRHEDWPSSSPDLNPLD 94
           W    D+         + W    +ID +   +W + SPDLNP++
Sbjct: 49  WQLMHDNDLKRVKSGVKKWFVDHKIDVM---NWTAQSPDLNPIE 89


>Y17699-1|CAA76819.1|   81|Anopheles gambiae hypothetical protein
           protein.
          Length = 81

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = -2

Query: 162 AREIDFIRHEDWPSSSPDLNPLDYMI 85
           A E   +  +D P   PD++P+D+++
Sbjct: 40  AAEQPNVEKDDSPKDKPDIDPVDFLV 65


>AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.
          Length = 461

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = -2

Query: 231 RHWVFQQDSAPAHRAKSTQDWLA-AREIDFIRHED 130
           R+W   + S   +RAK  QDW A  R  + +  ED
Sbjct: 189 RYWHSLRLSYACYRAKHRQDWAAQKRTYELLVQED 223


>AF457549-1|AAL68779.1|  257|Anopheles gambiae antigen 5-related 2
           protein protein.
          Length = 257

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
 Frame = +3

Query: 309 YTFLTKMYLC*APIRNSQPYHERGWKMTSLDTREYGCSLLHYC--VRXPYHFVC 464
           Y+F  +  L   P  NS P      +M S  T + GC++ ++       Y+FVC
Sbjct: 159 YSFTKQEQLNFYPSSNSGPAMGHFTQMASDQTAKIGCAMQNWVSGTWQTYYFVC 212


>U50472-1|AAA93475.1|  141|Anopheles gambiae protein ( Anopheles
           gambiae putativefatty acid binding protein mRNA, partial
           cds. ).
          Length = 141

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 4/31 (12%)
 Frame = -3

Query: 428 KKRATVFP----RVQRGHFPSSLMVWLGVSY 348
           K+ +  FP    RV+  HF S++ VW G  Y
Sbjct: 8   KQHSIAFPKHSSRVKPPHFTSTMAVWEGKKY 38


>L10441-1|AAA29361.1|  154|Anopheles gambiae transposase protein.
          Length = 154

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 8/32 (25%), Positives = 18/32 (56%)
 Frame = -2

Query: 231 RHWVFQQDSAPAHRAKSTQDWLAAREIDFIRH 136
           + ++F QD+AP H++  T + +     + + H
Sbjct: 121 KKFLFHQDNAPCHKSVKTMEKIQELGYELLPH 152


>L10438-1|AAA29359.1|  154|Anopheles gambiae transposase protein.
          Length = 154

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 8/32 (25%), Positives = 18/32 (56%)
 Frame = -2

Query: 231 RHWVFQQDSAPAHRAKSTQDWLAAREIDFIRH 136
           + ++F QD+AP H++  T + +     + + H
Sbjct: 121 KKFLFHQDNAPCHKSVKTMEKIQELGYELLPH 152


>AJ304412-1|CAC39105.1|  196|Anopheles gambiae dynamin protein.
          Length = 196

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 84  ISCNLTDSNLDWRRASLRAG 143
           +SC  TD    W+ + LRAG
Sbjct: 41  LSCESTDDVDSWKASFLRAG 60


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 672,889
Number of Sequences: 2352
Number of extensions: 13513
Number of successful extensions: 33
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60214320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)