Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0603
(622 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U49974-1|AAC52011.1| 351|Homo sapiens mariner transposase protein. 36 0.12
L28957-1|AAA72127.1| 367|Homo sapiens CTP:phosphocholine cytidy... 33 0.81
BC046355-1|AAH46355.1| 367|Homo sapiens phosphate cytidylyltran... 33 0.81
U52077-1|AAC52010.1| 343|Homo sapiens mariner transposase protein. 32 1.4
BC045634-1|AAH45634.2| 351|Homo sapiens PCYT1B protein protein. 31 3.3
AF148464-1|AAD35088.1| 369|Homo sapiens CTP:phosphocholine cyti... 31 3.3
AF052510-1|AAC39754.1| 330|Homo sapiens CTP:phosphocholine cyti... 31 3.3
BC130470-1|AAI30471.1| 577|Homo sapiens HECT domain containing ... 31 4.3
BC126352-1|AAI26353.1| 577|Homo sapiens HECT domain containing ... 31 4.3
BC019105-1|AAH19105.1| 210|Homo sapiens HECTD3 protein protein. 31 4.3
AL359473-2|CAI16438.1| 861|Homo sapiens HECT domain containing ... 31 4.3
AL359473-1|CAI16437.1| 471|Homo sapiens HECT domain containing ... 31 4.3
AK024809-1|BAB15015.1| 210|Homo sapiens protein ( Homo sapiens ... 31 4.3
>U49974-1|AAC52011.1| 351|Homo sapiens mariner transposase protein.
Length = 351
Score = 35.9 bits (79), Expect = 0.12
Identities = 19/70 (27%), Positives = 36/70 (51%)
Frame = -2
Query: 222 VFQQDSAPAHRAKSTQDWLAAREIDFIRHEDWPSSSPDLNPLDYMIWQHLEEKACSNPHP 43
+ D+APAH + T+ L + IRH P SPDL P D+ ++ +L++
Sbjct: 250 LLHHDNAPAHSSHQTRAILREFRWEIIRH---PPYSPDLAPSDFFLFPNLKKSLKGTHFS 306
Query: 42 NLESLKTSLI 13
++ ++K + +
Sbjct: 307 SVNNVKKTAL 316
>L28957-1|AAA72127.1| 367|Homo sapiens CTP:phosphocholine
cytidylyltransferase protein.
Length = 367
Score = 33.1 bits (72), Expect = 0.81
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = -2
Query: 180 TQDWLAAREIDFIRHEDWPSSSPDLNPLDYMIWQHLEEKACSNPHPNLESLKTS 19
T ++LA IDF+ H+D P SS + +++H++E P E + TS
Sbjct: 154 TPEFLAEHRIDFVAHDDIPYSSAGSDD----VYKHIKEAGMFAPTQRTEGISTS 203
>BC046355-1|AAH46355.1| 367|Homo sapiens phosphate
cytidylyltransferase 1, choline, alpha protein.
Length = 367
Score = 33.1 bits (72), Expect = 0.81
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = -2
Query: 180 TQDWLAAREIDFIRHEDWPSSSPDLNPLDYMIWQHLEEKACSNPHPNLESLKTS 19
T ++LA IDF+ H+D P SS + +++H++E P E + TS
Sbjct: 154 TPEFLAEHRIDFVAHDDIPYSSAGSDD----VYKHIKEAGMFAPTQRTEGISTS 203
>U52077-1|AAC52010.1| 343|Homo sapiens mariner transposase protein.
Length = 343
Score = 32.3 bits (70), Expect = 1.4
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = -2
Query: 243 MFNNRHWVFQQDSAPAHRAKSTQDWLAAREIDFIRHEDWPSSSPDLNPLDYMIWQHLE 70
+ N + + D+A H A+ T L + + H P SPDL+P DY ++HL+
Sbjct: 236 LVNRKGPILLHDNARPHVAQPTLQKLNELGYEVLPH---PPYSPDLSPTDYHFFKHLD 290
>BC045634-1|AAH45634.2| 351|Homo sapiens PCYT1B protein protein.
Length = 351
Score = 31.1 bits (67), Expect = 3.3
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = -2
Query: 180 TQDWLAAREIDFIRHEDWPSSSPDLNPLDYMIWQHLEEKACSNPHPNLESLKTS 19
T ++L +IDF+ H+D P SS + +++H++E P E + TS
Sbjct: 136 TPEFLEKHKIDFVAHDDIPYSSAGSDD----VYKHIKEAGMFVPTQRTEGISTS 185
>AF148464-1|AAD35088.1| 369|Homo sapiens CTP:phosphocholine
cytidylyltransferase CCTB2 isoform protein.
Length = 369
Score = 31.1 bits (67), Expect = 3.3
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = -2
Query: 180 TQDWLAAREIDFIRHEDWPSSSPDLNPLDYMIWQHLEEKACSNPHPNLESLKTS 19
T ++L +IDF+ H+D P SS + +++H++E P E + TS
Sbjct: 154 TPEFLEKHKIDFVAHDDIPYSSAGSDD----VYKHIKEAGMFVPTQRTEGISTS 203
>AF052510-1|AAC39754.1| 330|Homo sapiens CTP:phosphocholine
cytidylyltransferase b protein.
Length = 330
Score = 31.1 bits (67), Expect = 3.3
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = -2
Query: 180 TQDWLAAREIDFIRHEDWPSSSPDLNPLDYMIWQHLEEKACSNPHPNLESLKTS 19
T ++L +IDF+ H+D P SS + +++H++E P E + TS
Sbjct: 154 TPEFLEKHKIDFVAHDDIPYSSAGSDD----VYKHIKEAGMFVPTQRTEGISTS 203
>BC130470-1|AAI30471.1| 577|Homo sapiens HECT domain containing 3
protein.
Length = 577
Score = 30.7 bits (66), Expect = 4.3
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = -2
Query: 99 LDYMIWQHLEEKACSNPHPNLESLK 25
LD + WQ LE+K C +P +++L+
Sbjct: 447 LDLLTWQELEKKVCGDPEVTVDALR 471
>BC126352-1|AAI26353.1| 577|Homo sapiens HECT domain containing 3
protein.
Length = 577
Score = 30.7 bits (66), Expect = 4.3
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = -2
Query: 99 LDYMIWQHLEEKACSNPHPNLESLK 25
LD + WQ LE+K C +P +++L+
Sbjct: 447 LDLLTWQELEKKVCGDPEVTVDALR 471
>BC019105-1|AAH19105.1| 210|Homo sapiens HECTD3 protein protein.
Length = 210
Score = 30.7 bits (66), Expect = 4.3
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = -2
Query: 99 LDYMIWQHLEEKACSNPHPNLESLK 25
LD + WQ LE+K C +P +++L+
Sbjct: 80 LDLLTWQELEKKVCGDPEVTVDALR 104
>AL359473-2|CAI16438.1| 861|Homo sapiens HECT domain containing 3
protein.
Length = 861
Score = 30.7 bits (66), Expect = 4.3
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = -2
Query: 99 LDYMIWQHLEEKACSNPHPNLESLK 25
LD + WQ LE+K C +P +++L+
Sbjct: 731 LDLLTWQELEKKVCGDPEVTVDALR 755
>AL359473-1|CAI16437.1| 471|Homo sapiens HECT domain containing 3
protein.
Length = 471
Score = 30.7 bits (66), Expect = 4.3
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = -2
Query: 99 LDYMIWQHLEEKACSNPHPNLESLK 25
LD + WQ LE+K C +P +++L+
Sbjct: 341 LDLLTWQELEKKVCGDPEVTVDALR 365
>AK024809-1|BAB15015.1| 210|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21156 fis, clone CAS09878. ).
Length = 210
Score = 30.7 bits (66), Expect = 4.3
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = -2
Query: 99 LDYMIWQHLEEKACSNPHPNLESLK 25
LD + WQ LE+K C +P +++L+
Sbjct: 80 LDLLTWQELEKKVCGDPEVTVDALR 104
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,891,664
Number of Sequences: 237096
Number of extensions: 1987421
Number of successful extensions: 4164
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4069
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4159
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6691573490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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