Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0603
         (622 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U33463-1|AAC47095.1|  345|Drosophila melanogaster transposase pr...    42   5e-04
X67681-1|CAA47913.1|  339|Drosophila melanogaster ORF protein.         40   0.003
AE013599-3288|AAF46770.2|  311|Drosophila melanogaster CG9294-PA...    30   2.2  
AE014134-1856|AAS64674.1| 1429|Drosophila melanogaster CG33304-P...    29   6.7  
AY069538-1|AAL39683.1|  562|Drosophila melanogaster LD26135p pro...    28   8.9  
AE014298-875|AAF46151.1|  562|Drosophila melanogaster CG12219-PA...    28   8.9  

>U33463-1|AAC47095.1|  345|Drosophila melanogaster transposase
           protein.
          Length = 345

 Score = 42.3 bits (95), Expect = 5e-04
 Identities = 26/87 (29%), Positives = 44/87 (50%)
 Frame = -2

Query: 270 EPCGTFSHTMFNNRHWVFQQDSAPAHRAKSTQDWLAAREIDFIRHEDWPSSSPDLNPLDY 91
           E  G FS+   N  ++ F QD+ P H+  + ++WL       I   D P  SPDLNP++ 
Sbjct: 231 EKFGLFSN---NKPNFKFYQDNDPKHKEYNVRNWLLYNCGKVI---DTPPQSPDLNPIE- 283

Query: 90  MIWQHLEEKACSNPHPNLESLKTSLIK 10
            +W +L++K         + L  ++I+
Sbjct: 284 NLWAYLKKKVAKRGPKTRQQLMAAIIE 310


>X67681-1|CAA47913.1|  339|Drosophila melanogaster ORF protein.
          Length = 339

 Score = 39.9 bits (89), Expect = 0.003
 Identities = 18/65 (27%), Positives = 33/65 (50%)
 Frame = -2

Query: 258 TFSHTMFNNRHWVFQQDSAPAHRAKSTQDWLAAREIDFIRHEDWPSSSPDLNPLDYMIWQ 79
           T  + +F    W+ QQD+AP H+ +    +L    +  +    WP  SPDLN ++  +W 
Sbjct: 227 TSGNRLFPTTEWILQQDNAPCHKGRIPTKFLNDLNLAVL---PWPPQSPDLNIIE-NVWA 282

Query: 78  HLEEK 64
            ++ +
Sbjct: 283 FIKNQ 287


>AE013599-3288|AAF46770.2|  311|Drosophila melanogaster CG9294-PA,
           isoform A protein.
          Length = 311

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = -2

Query: 552 RALLKAVRGKKISGNLFSDEKIFPVEESYNKQNDKVXAHSSEEASNRIP 406
           R +L+ V+    +GN F + K     + YN+QN+ +  HS E   ++ P
Sbjct: 24  RFILRLVQWFNRTGNNFHNNKENHNNQQYNEQNNDIQNHSQETRVHQYP 72


>AE014134-1856|AAS64674.1| 1429|Drosophila melanogaster CG33304-PA
           protein.
          Length = 1429

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 15/50 (30%), Positives = 24/50 (48%)
 Frame = +2

Query: 65  FSSKCCHIM*SNGFKSGLEEGQSSCRMKSISRAASQSCVLFAL*AGAESC 214
           + SKCCH   S+G  S   +  +SC     S + + S  +  + + A SC
Sbjct: 290 YRSKCCHSEASHGSLSRTSQTYASCSPACTSPSPAPSTSMSMVFSAASSC 339


>AY069538-1|AAL39683.1|  562|Drosophila melanogaster LD26135p
           protein.
          Length = 562

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = -3

Query: 242 CSITGTGYSNKIRRQLIERRAHKTGWRRVKSTSSGTKTG 126
           C+   T + +K       +R HK  W R ++T S  K G
Sbjct: 501 CAFCPTEFRSKSNMYHHTKRKHKAEWERSRATRSAAKAG 539


>AE014298-875|AAF46151.1|  562|Drosophila melanogaster CG12219-PA
           protein.
          Length = 562

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = -3

Query: 242 CSITGTGYSNKIRRQLIERRAHKTGWRRVKSTSSGTKTG 126
           C+   T + +K       +R HK  W R ++T S  K G
Sbjct: 501 CAFCPTEFRSKSNMYHHTKRKHKAEWERSRATRSAAKAG 539


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,116,613
Number of Sequences: 53049
Number of extensions: 600392
Number of successful extensions: 1301
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1276
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1299
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2559155400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)