Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0602
         (680 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    23   3.1  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   7.1  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   7.1  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   7.1  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   9.3  

>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +1

Query: 217 TDSFKWALRELAITFCSHCSIAISLLFNRISQSEM 321
           + + K +  EL IT C   SI  +LLF+  S  ++
Sbjct: 342 SSALKLSQNELEITACKFFSIDNALLFSANSTKKL 376


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 16/66 (24%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
 Frame = -3

Query: 402 HS-INVSRQKRMRYVICPAIFVLLFYILHLTLRYAVEEKTNCNGTMATESNSKLSECPFK 226
           HS +++   KR+    CP I     ++ +    +A  +   CN    T  N  +     K
Sbjct: 220 HSKVHIREDKRLTCPKCPFITEYKHHLEYHLRNHAGSKPFQCNKCDYTCVNKSMLNSHMK 279

Query: 225 AISLVY 208
           + S VY
Sbjct: 280 SHSNVY 285


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +2

Query: 206 IYTRLIALNGHSESLLLLSVAIVPL 280
           IYTRL++ +   +S  + + AI PL
Sbjct: 549 IYTRLVSFSDRLKSRGIRTAAIWPL 573


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 12/44 (27%), Positives = 18/44 (40%)
 Frame = +1

Query: 196 NTFYIH*TDSFKWALRELAITFCSHCSIAISLLFNRISQSEM*Y 327
           + FY   T+ F        I    +  +  +LLF R  +S M Y
Sbjct: 18  DAFYFFETEQFTLLWVLFVIIVAGNVGVLYTLLFGRSRKSRMNY 61


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -1

Query: 359 FVLPSSCFCFIYYISL*DMRLKRR 288
           F   +S +CF YY+ +     KRR
Sbjct: 69  FFKEASLYCFNYYVIVVTTFYKRR 92


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,338
Number of Sequences: 336
Number of extensions: 3393
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)