Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0601
         (558 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.        25   1.3  
AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.        25   1.3  
AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.        25   1.3  
AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.        25   1.3  
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    25   1.3  
AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical prot...    23   5.1  
AJ237664-1|CAB40379.2|   81|Anopheles gambiae putative infection...    23   5.1  
AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR prot...    23   6.8  

>AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 25.4 bits (53), Expect = 1.3
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = -2

Query: 107 CSAFMSFVTIFLECPDGSKWLVCSDASFLVRC 12
           CS   SF   F E  DG +  +CS     +RC
Sbjct: 47  CSCDESFFGPFCETKDGEQPALCSSYEDCIRC 78


>AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 25.4 bits (53), Expect = 1.3
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = -2

Query: 107 CSAFMSFVTIFLECPDGSKWLVCSDASFLVRC 12
           CS   SF   F E  DG +  +CS     +RC
Sbjct: 47  CSCDESFFGPFCETKDGEQPALCSSYEDCIRC 78


>AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 25.4 bits (53), Expect = 1.3
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = -2

Query: 107 CSAFMSFVTIFLECPDGSKWLVCSDASFLVRC 12
           CS   SF   F E  DG +  +CS     +RC
Sbjct: 47  CSCDESFFGPFCETKDGEQPALCSSYEDCIRC 78


>AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 25.4 bits (53), Expect = 1.3
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = -2

Query: 107 CSAFMSFVTIFLECPDGSKWLVCSDASFLVRC 12
           CS   SF   F E  DG +  +CS     +RC
Sbjct: 47  CSCDESFFGPFCETKDGEQPALCSSYEDCIRC 78


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 25.4 bits (53), Expect = 1.3
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = -2

Query: 107 CSAFMSFVTIFLECPDGSKWLVCSDASFLVRC 12
           CS   SF   F E  DG +  +CS     +RC
Sbjct: 623 CSCDESFFGPFCETKDGEQPALCSSYEDCIRC 654


>AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical protein
           protein.
          Length = 278

 Score = 23.4 bits (48), Expect = 5.1
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = +3

Query: 126 HQTLDGLLINRQLWLAEGLLSCQTKG 203
           H   DGLL  R L + EGL   Q  G
Sbjct: 128 HDQDDGLLDERYLEVLEGLKEAQAAG 153


>AJ237664-1|CAB40379.2|   81|Anopheles gambiae putative infection
           responsive shortpeptide protein.
          Length = 81

 Score = 23.4 bits (48), Expect = 5.1
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 189 CQTKGGRYCGY 221
           C++ G RYCGY
Sbjct: 32  CKSIGARYCGY 42


>AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR
           protein.
          Length = 502

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = +3

Query: 276 FFCSHKISTSPTHRGCDLERDNATNEPSSKSVYFGRNTVPVSDLE*WAR 422
           F    +  T P   G ++ R++      S S  FG  TVPV  ++ ++R
Sbjct: 314 FASIRRTMTIPRSYGTNV-RESRRQLNISSSQLFGNGTVPVQQIQLYSR 361


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 544,362
Number of Sequences: 2352
Number of extensions: 12225
Number of successful extensions: 23
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52142868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)