Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0601
         (558 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-2140|AAF53151.1|   69|Drosophila melanogaster CG6770-PA...    67   1e-11
U66411-2|AAB71082.1|  397|Drosophila melanogaster putative type ...    28   9.8  
AY094924-1|AAM11277.1|  464|Drosophila melanogaster RH42270p pro...    28   9.8  
AY060914-1|AAL28462.1|  425|Drosophila melanogaster GM05887p pro...    28   9.8  
AM294627-1|CAL26625.1|  143|Drosophila melanogaster CG13934 prot...    28   9.8  
AM294626-1|CAL26624.1|  143|Drosophila melanogaster CG13934 prot...    28   9.8  
AM294625-1|CAL26623.1|  143|Drosophila melanogaster CG13934 prot...    28   9.8  
AM294624-1|CAL26622.1|  143|Drosophila melanogaster CG13934 prot...    28   9.8  
AM294622-1|CAL26620.1|  143|Drosophila melanogaster CG13934 prot...    28   9.8  
AE013599-3380|AAF46832.1|  464|Drosophila melanogaster CG3425-PA...    28   9.8  

>AE014134-2140|AAF53151.1|   69|Drosophila melanogaster CG6770-PA
           protein.
          Length = 69

 Score = 67.3 bits (157), Expect = 1e-11
 Identities = 28/36 (77%), Positives = 32/36 (88%)
 Frame = +1

Query: 10  KQRTKKEASEHTNHFDPSGHSRKIVTKLMNAEHNKK 117
           KQR K+EA+EHTNHFDPSGHSRKI+TKLMN  +N K
Sbjct: 27  KQRNKREANEHTNHFDPSGHSRKILTKLMNTNNNNK 62


>U66411-2|AAB71082.1|  397|Drosophila melanogaster putative type III
           alcohol dehydrogenaseprotein.
          Length = 397

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 16/31 (51%), Positives = 20/31 (64%)
 Frame = +3

Query: 330 ERDNATNEPSSKSVYFGRNTVPVSDLE*WAR 422
           ER  A ++PS +  Y GRN  PVSD+  WAR
Sbjct: 188 ERGLAPSDPSLRPTYQGRN--PVSDV--WAR 214


>AY094924-1|AAM11277.1|  464|Drosophila melanogaster RH42270p
           protein.
          Length = 464

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 16/31 (51%), Positives = 20/31 (64%)
 Frame = +3

Query: 330 ERDNATNEPSSKSVYFGRNTVPVSDLE*WAR 422
           ER  A ++PS +  Y GRN  PVSD+  WAR
Sbjct: 255 ERGLAPSDPSLRPTYQGRN--PVSDV--WAR 281


>AY060914-1|AAL28462.1|  425|Drosophila melanogaster GM05887p
           protein.
          Length = 425

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 16/31 (51%), Positives = 20/31 (64%)
 Frame = +3

Query: 330 ERDNATNEPSSKSVYFGRNTVPVSDLE*WAR 422
           ER  A ++PS +  Y GRN  PVSD+  WAR
Sbjct: 216 ERGLAPSDPSLRPTYQGRN--PVSDV--WAR 242


>AM294627-1|CAL26625.1|  143|Drosophila melanogaster CG13934
           protein.
          Length = 143

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = +1

Query: 4   HEKQRTKKEASEHTNHFDPSGHSRKIVTKLMNAEHNKK 117
           H++QR     S   +H +PSGH R +  ++  A    K
Sbjct: 69  HQEQRNGDYVSGSYSHLEPSGHIRSVHYEVRGANRGFK 106


>AM294626-1|CAL26624.1|  143|Drosophila melanogaster CG13934
           protein.
          Length = 143

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = +1

Query: 4   HEKQRTKKEASEHTNHFDPSGHSRKIVTKLMNAEHNKK 117
           H++QR     S   +H +PSGH R +  ++  A    K
Sbjct: 69  HQEQRNGDYVSGSYSHLEPSGHIRSVHYEVRGANRGFK 106


>AM294625-1|CAL26623.1|  143|Drosophila melanogaster CG13934
           protein.
          Length = 143

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = +1

Query: 4   HEKQRTKKEASEHTNHFDPSGHSRKIVTKLMNAEHNKK 117
           H++QR     S   +H +PSGH R +  ++  A    K
Sbjct: 69  HQEQRNGDYVSGSYSHLEPSGHIRSVHYEVRGANRGFK 106


>AM294624-1|CAL26622.1|  143|Drosophila melanogaster CG13934
           protein.
          Length = 143

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = +1

Query: 4   HEKQRTKKEASEHTNHFDPSGHSRKIVTKLMNAEHNKK 117
           H++QR     S   +H +PSGH R +  ++  A    K
Sbjct: 69  HQEQRNGDYVSGSYSHLEPSGHIRSVHYEVRGANRGFK 106


>AM294622-1|CAL26620.1|  143|Drosophila melanogaster CG13934
           protein.
          Length = 143

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = +1

Query: 4   HEKQRTKKEASEHTNHFDPSGHSRKIVTKLMNAEHNKK 117
           H++QR     S   +H +PSGH R +  ++  A    K
Sbjct: 69  HQEQRNGDYVSGSYSHLEPSGHIRSVHYEVRGANRGFK 106


>AE013599-3380|AAF46832.1|  464|Drosophila melanogaster CG3425-PA
           protein.
          Length = 464

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 16/31 (51%), Positives = 20/31 (64%)
 Frame = +3

Query: 330 ERDNATNEPSSKSVYFGRNTVPVSDLE*WAR 422
           ER  A ++PS +  Y GRN  PVSD+  WAR
Sbjct: 255 ERGLAPSDPSLRPTYQGRN--PVSDV--WAR 281


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,675,713
Number of Sequences: 53049
Number of extensions: 484744
Number of successful extensions: 1418
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1370
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1418
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2151905496
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)