Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0601
         (558 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z22181-7|CAA80189.2|   62|Caenorhabditis elegans Hypothetical pr...    31   0.74 
AF016671-2|AAB66113.1|  168|Caenorhabditis elegans Hypothetical ...    28   4.0  
U80847-7|AAO91744.1|  778|Caenorhabditis elegans Hypothetical pr...    27   6.9  
U80847-6|AAK68190.1|  796|Caenorhabditis elegans Hypothetical pr...    27   6.9  
U80847-5|AAK68189.1|  793|Caenorhabditis elegans Hypothetical pr...    27   6.9  
U88167-2|AAB42225.3|  908|Caenorhabditis elegans Hypothetical pr...    27   9.1  
U43375-7|AAA83624.1|  271|Caenorhabditis elegans Hypothetical pr...    27   9.1  

>Z22181-7|CAA80189.2|   62|Caenorhabditis elegans Hypothetical
           protein ZK632.9 protein.
          Length = 62

 Score = 30.7 bits (66), Expect = 0.74
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +1

Query: 13  QRTKKEASEHTNHFDPSGHSRKIVTKLMNAEHNKK 117
           +RTK +  EH +   P G +RK+V    N E  +K
Sbjct: 26  KRTKSDRVEHKHASQPGGDTRKVVQTASNGEAKRK 60


>AF016671-2|AAB66113.1|  168|Caenorhabditis elegans Hypothetical
           protein W09G10.5 protein.
          Length = 168

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = -2

Query: 119 VFLLCSAFMSFVTIFLECPDGSKWLVCSDASFLVRCFS 6
           + L CSA ++ V +   CP G  W + S   + ++ F+
Sbjct: 8   IVLCCSAVLARVPVAKNCPTGWTWFLRSRGGWCMKVFT 45


>U80847-7|AAO91744.1|  778|Caenorhabditis elegans Hypothetical
           protein C17H11.6c protein.
          Length = 778

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 10/17 (58%), Positives = 14/17 (82%)
 Frame = +3

Query: 291 KISTSPTHRGCDLERDN 341
           K+S+S  HRGC +ERD+
Sbjct: 594 KLSSSSIHRGCVIERDD 610


>U80847-6|AAK68190.1|  796|Caenorhabditis elegans Hypothetical
           protein C17H11.6b protein.
          Length = 796

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 10/17 (58%), Positives = 14/17 (82%)
 Frame = +3

Query: 291 KISTSPTHRGCDLERDN 341
           K+S+S  HRGC +ERD+
Sbjct: 597 KLSSSSIHRGCVIERDD 613


>U80847-5|AAK68189.1|  793|Caenorhabditis elegans Hypothetical
           protein C17H11.6a protein.
          Length = 793

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 10/17 (58%), Positives = 14/17 (82%)
 Frame = +3

Query: 291 KISTSPTHRGCDLERDN 341
           K+S+S  HRGC +ERD+
Sbjct: 594 KLSSSSIHRGCVIERDD 610


>U88167-2|AAB42225.3|  908|Caenorhabditis elegans Hypothetical
           protein D2092.5 protein.
          Length = 908

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = +3

Query: 6   REAAHQERSV*THQPLRSV-RAFEKDRHETHERRAQQEDFKHQ 131
           R+++H   +      +RS+ R  E  R E   RR+Q+EDFK Q
Sbjct: 509 RDSSHDTNAS-NETDIRSMSRELESLRSEISSRRSQEEDFKLQ 550


>U43375-7|AAA83624.1|  271|Caenorhabditis elegans Hypothetical
           protein K09C4.4 protein.
          Length = 271

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
 Frame = -2

Query: 119 VFLLCSAFMSFVTIFLEC--PDGSKWLVCSD 33
           VF L +   SF+ +   C  P+  KWLVC +
Sbjct: 146 VFPLAALISSFLVLIWVCRLPESPKWLVCQN 176


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,105,033
Number of Sequences: 27780
Number of extensions: 245628
Number of successful extensions: 703
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 703
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1144922904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)