Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0601
(558 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 24 1.2
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 23 2.1
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 3.7
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 3.7
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 22 3.7
DQ435333-1|ABD92648.1| 135|Apis mellifera OBP16 protein. 21 6.4
AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cycl... 21 6.4
AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cycl... 21 6.4
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 21 8.4
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 21 8.4
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 21 8.4
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 21 8.4
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 21 8.4
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 21 8.4
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 23.8 bits (49), Expect = 1.2
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -1
Query: 87 RDDLSRMPGRIEVVGVFRRFF 25
+D+L + P RI G+FRRF+
Sbjct: 538 KDELGK-PSRISKQGLFRRFY 557
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 23.0 bits (47), Expect = 2.1
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = +1
Query: 457 NYYMFNLSLRDTRWTVI 507
NYY+FNL++ D + ++
Sbjct: 69 NYYLFNLAVSDLLFLIL 85
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 22.2 bits (45), Expect = 3.7
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +1
Query: 232 FGWXLVSESMEHPRRF 279
F W LVS S++ RRF
Sbjct: 1542 FHWTLVSNSVKMQRRF 1557
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 22.2 bits (45), Expect = 3.7
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +1
Query: 232 FGWXLVSESMEHPRRF 279
F W LVS S++ RRF
Sbjct: 1538 FHWTLVSNSVKMQRRF 1553
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 22.2 bits (45), Expect = 3.7
Identities = 7/18 (38%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
Frame = -3
Query: 208 RPPF-VWQLNSPSASHSC 158
RP + W+LN+ ++ H+C
Sbjct: 8 RPSYCTWELNATNSPHTC 25
>DQ435333-1|ABD92648.1| 135|Apis mellifera OBP16 protein.
Length = 135
Score = 21.4 bits (43), Expect = 6.4
Identities = 8/29 (27%), Positives = 17/29 (58%)
Frame = +1
Query: 61 SGHSRKIVTKLMNAEHNKKTSNTKH*MDC 147
+G S+KI+ ++ N N + N + ++C
Sbjct: 37 TGTSQKIIDEVYNGNVNVEDENVQSYVEC 65
>AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 21.4 bits (43), Expect = 6.4
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -2
Query: 407 EIRHWNGVTSKIYRLTAWLICGVVPF 330
E+RH V +K Y L G+V F
Sbjct: 395 ELRHSRPVPAKKYDCVTLLFSGIVGF 420
>AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 21.4 bits (43), Expect = 6.4
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -2
Query: 407 EIRHWNGVTSKIYRLTAWLICGVVPF 330
E+RH V +K Y L G+V F
Sbjct: 395 ELRHSRPVPAKKYDCVTLLFSGIVGF 420
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 21.0 bits (42), Expect = 8.4
Identities = 9/42 (21%), Positives = 17/42 (40%)
Frame = -3
Query: 268 DVPSILRRAXTRTLLGYPQ*RPPFVWQLNSPSASHSCLLISN 143
++P + + G+P RP + W P+ + I N
Sbjct: 636 EIPLYGKMTLDDKVFGFPLDRPMWAWNFTIPNMYFKDVFIYN 677
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 21.0 bits (42), Expect = 8.4
Identities = 9/42 (21%), Positives = 17/42 (40%)
Frame = -3
Query: 268 DVPSILRRAXTRTLLGYPQ*RPPFVWQLNSPSASHSCLLISN 143
++P + + G+P RP + W P+ + I N
Sbjct: 636 EIPLYGKMTLDDKVFGFPLDRPMWAWNFTIPNMYFKDVFIYN 677
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.0 bits (42), Expect = 8.4
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +3
Query: 177 GLLSCQTKGGRYCGY 221
GL SC T GR GY
Sbjct: 143 GLKSCHTGVGRNVGY 157
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.0 bits (42), Expect = 8.4
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +3
Query: 177 GLLSCQTKGGRYCGY 221
GL SC T GR GY
Sbjct: 143 GLKSCHTGVGRNVGY 157
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.0 bits (42), Expect = 8.4
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +3
Query: 177 GLLSCQTKGGRYCGY 221
GL SC T GR GY
Sbjct: 143 GLKSCHTGVGRNVGY 157
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.0 bits (42), Expect = 8.4
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +3
Query: 132 TLDGLLINRQLWLAEGLLSCQTKGGRYCG 218
++D I+ + +LAE S +YCG
Sbjct: 60 SIDRSSIHEESYLAESSRSIDPCASKYCG 88
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,052
Number of Sequences: 438
Number of extensions: 2914
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16072521
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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