Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0600
         (706 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0ITQ1 Cluster: Os11g0228800 protein; n=1; Oryza sativa...    33   5.2  
UniRef50_UPI0000D56B8E Cluster: PREDICTED: similar to CG9642-PA;...    33   6.8  
UniRef50_A7AV98 Cluster: Putative uncharacterized protein; n=1; ...    33   9.0  

>UniRef50_Q0ITQ1 Cluster: Os11g0228800 protein; n=1; Oryza sativa
           (japonica cultivar-group)|Rep: Os11g0228800 protein -
           Oryza sativa subsp. japonica (Rice)
          Length = 936

 Score = 33.5 bits (73), Expect = 5.2
 Identities = 18/58 (31%), Positives = 28/58 (48%)
 Frame = +2

Query: 497 YVQLLYPSASLGHSKLTLLFLTPTKILIINGPRNWCRESKTHINISLSIKYMYFLHGY 670
           Y+ L Y  + +   KL +  L    + I+ GP NWC+  +   N  + +  MY L GY
Sbjct: 566 YLPLEYLRSGIVSDKLDIFSLGVVMLKIMAGPSNWCKHEEMPHNRFIDLS-MYRLGGY 622


>UniRef50_UPI0000D56B8E Cluster: PREDICTED: similar to CG9642-PA;
           n=2; Tribolium castaneum|Rep: PREDICTED: similar to
           CG9642-PA - Tribolium castaneum
          Length = 492

 Score = 33.1 bits (72), Expect = 6.8
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = -1

Query: 199 NCKNRSEQLSVCTYIKHLRIDYEEILTRREIM 104
           NCKN+   L  CT +K L I ++++L+  EI+
Sbjct: 75  NCKNQFHNLQECTALKSLPIKHDDVLSNPEIV 106


>UniRef50_A7AV98 Cluster: Putative uncharacterized protein; n=1;
           Babesia bovis|Rep: Putative uncharacterized protein -
           Babesia bovis
          Length = 768

 Score = 32.7 bits (71), Expect = 9.0
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = -3

Query: 506 VVHKLSHFIVTNMKLQL*RLKINLFVTYRCFRNIFLTFKLL 384
           +  +L HF V    + L RLK  L+   RCF  +  T +LL
Sbjct: 102 IAQELEHFCVDRSSISLRRLKAMLYTGMRCFNRLPATLQLL 142


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 613,010,344
Number of Sequences: 1657284
Number of extensions: 10891465
Number of successful extensions: 18289
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17835
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18289
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56198352344
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)