Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0600
         (706 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   2.4  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    23   2.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   4.2  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    22   4.2  

>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 11/46 (23%), Positives = 22/46 (47%)
 Frame = +2

Query: 506 LLYPSASLGHSKLTLLFLTPTKILIINGPRNWCRESKTHINISLSI 643
           ++Y    +  +  ++L + P   +  NG RN+    KTH  + L +
Sbjct: 54  IVYSFIGVNDADWSVLVIDPELDVDQNGFRNFTNLKKTHPKVKLQV 99


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +2

Query: 86  NILYLYHNFPTS*NFLVINSQMFDVCTHG*LFGSVFTITYTLI 214
           N+ +L HN     N ++  +++F       LFG +FT+  TLI
Sbjct: 133 NLPFLEHNLIRLKNCVIYFNRIFG---WNILFGHIFTVCRTLI 172


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = -3

Query: 479 VTNMKLQL*RLKINLFVTYRCFRNIFLTFKLLFV 378
           + ++++ L   +I  FVT+ C R+ F + KLL +
Sbjct: 11  LNSLQIYLQHNQIFGFVTFTCTRSNFRSSKLLIL 44


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = -3

Query: 479 VTNMKLQL*RLKINLFVTYRCFRNIFLTFKLLFV 378
           + ++++ L   +I  FVT+ C R+ F + KLL +
Sbjct: 29  LNSLQIYLQHNQIFGFVTFTCTRSNFRSSKLLIL 62


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,668
Number of Sequences: 336
Number of extensions: 3188
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)