Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0600
         (706 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058310-1|AAL13539.1|  564|Drosophila melanogaster GH07286p pro...    30   2.7  
AE014297-3147|AAF55989.2|  505|Drosophila melanogaster CG13850-P...    30   2.7  
AY129433-1|AAM76175.1|  311|Drosophila melanogaster HL01515p pro...    30   3.5  
AE014134-1279|AAN10631.1|  311|Drosophila melanogaster CG5973-PC...    30   3.5  
AE014134-1278|AAN10630.1|  311|Drosophila melanogaster CG5973-PB...    30   3.5  
AE014134-1277|AAF52517.2|  311|Drosophila melanogaster CG5973-PA...    30   3.5  

>AY058310-1|AAL13539.1|  564|Drosophila melanogaster GH07286p
           protein.
          Length = 564

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = -1

Query: 292 TKENRNMD*RILLSIVSLLTEWSDLTD*RICNCKNRSEQLSVC 164
           T+ N     +  L IVS+L EWS L   +I   +N +  L +C
Sbjct: 104 TENNNGFSRKHALRIVSILAEWSTLNRVKISEFENDTRFLRIC 146


>AE014297-3147|AAF55989.2|  505|Drosophila melanogaster CG13850-PA
           protein.
          Length = 505

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = -1

Query: 292 TKENRNMD*RILLSIVSLLTEWSDLTD*RICNCKNRSEQLSVC 164
           T+ N     +  L IVS+L EWS L   +I   +N +  L +C
Sbjct: 104 TENNNGFSRKHALRIVSILAEWSTLNRVKISEFENDTRFLRIC 146


>AY129433-1|AAM76175.1|  311|Drosophila melanogaster HL01515p
           protein.
          Length = 311

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 16/58 (27%), Positives = 27/58 (46%)
 Frame = +1

Query: 406 MFLKHLYVTNKFILRRYNCNFILVTIK*DNLCTTTVPVRFAGAFKINIIISHPHKDSH 579
           MFL+  +   +  L+R   NF  + +K    C   +P +    F+ NI+   P +D H
Sbjct: 78  MFLRPTHYYPESALKRLK-NFYHMKLKYGAACENIIPSKLRNVFEANILNLLPQRDQH 134


>AE014134-1279|AAN10631.1|  311|Drosophila melanogaster CG5973-PC,
           isoform C protein.
          Length = 311

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 16/58 (27%), Positives = 27/58 (46%)
 Frame = +1

Query: 406 MFLKHLYVTNKFILRRYNCNFILVTIK*DNLCTTTVPVRFAGAFKINIIISHPHKDSH 579
           MFL+  +   +  L+R   NF  + +K    C   +P +    F+ NI+   P +D H
Sbjct: 78  MFLRPTHYYPESALKRLK-NFYHMKLKYGAACENIIPSKLRNVFEANILNLLPQRDQH 134


>AE014134-1278|AAN10630.1|  311|Drosophila melanogaster CG5973-PB,
           isoform B protein.
          Length = 311

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 16/58 (27%), Positives = 27/58 (46%)
 Frame = +1

Query: 406 MFLKHLYVTNKFILRRYNCNFILVTIK*DNLCTTTVPVRFAGAFKINIIISHPHKDSH 579
           MFL+  +   +  L+R   NF  + +K    C   +P +    F+ NI+   P +D H
Sbjct: 78  MFLRPTHYYPESALKRLK-NFYHMKLKYGAACENIIPSKLRNVFEANILNLLPQRDQH 134


>AE014134-1277|AAF52517.2|  311|Drosophila melanogaster CG5973-PA,
           isoform A protein.
          Length = 311

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 16/58 (27%), Positives = 27/58 (46%)
 Frame = +1

Query: 406 MFLKHLYVTNKFILRRYNCNFILVTIK*DNLCTTTVPVRFAGAFKINIIISHPHKDSH 579
           MFL+  +   +  L+R   NF  + +K    C   +P +    F+ NI+   P +D H
Sbjct: 78  MFLRPTHYYPESALKRLK-NFYHMKLKYGAACENIIPSKLRNVFEANILNLLPQRDQH 134


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,688,015
Number of Sequences: 53049
Number of extensions: 509039
Number of successful extensions: 737
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 737
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3108380451
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)