Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0599
         (689 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U70850-3|AAB09122.3|  596|Caenorhabditis elegans Zinc finger plu...    29   3.1  
AY289599-1|AAP43944.1|  596|Caenorhabditis elegans ZAG-1 protein.      29   3.1  
AY224511-1|AAP37457.1|  596|Caenorhabditis elegans ZAG-1 protein.      29   3.1  
Z67737-6|CAA91540.3|  399|Caenorhabditis elegans Hypothetical pr...    29   4.1  
AF162674-1|AAF80462.1|  575|Caenorhabditis elegans CNT-like nucl...    28   7.2  
AF016413-4|AAM29683.1|  454|Caenorhabditis elegans Hypothetical ...    28   7.2  
AF016413-3|AAB65256.3|  555|Caenorhabditis elegans Hypothetical ...    28   7.2  
Z81119-2|CAB03332.1|  350|Caenorhabditis elegans Hypothetical pr...    27   9.6  
AJ277649-1|CAB90211.1|  917|Caenorhabditis elegans CHE-14 protei...    27   9.6  
AF067618-5|AAC19198.2|  917|Caenorhabditis elegans Abnormal chem...    27   9.6  

>U70850-3|AAB09122.3|  596|Caenorhabditis elegans Zinc finger plus
           homeodomain, axonguidance protein 1 protein.
          Length = 596

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +2

Query: 335 PSRITPFNPFQIPLLNTIIL 394
           PS +TPFNP+Q+ +   I+L
Sbjct: 82  PSMVTPFNPYQLMMYRNIML 101


>AY289599-1|AAP43944.1|  596|Caenorhabditis elegans ZAG-1 protein.
          Length = 596

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +2

Query: 335 PSRITPFNPFQIPLLNTIIL 394
           PS +TPFNP+Q+ +   I+L
Sbjct: 82  PSMVTPFNPYQLMMYRNIML 101


>AY224511-1|AAP37457.1|  596|Caenorhabditis elegans ZAG-1 protein.
          Length = 596

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +2

Query: 335 PSRITPFNPFQIPLLNTIIL 394
           PS +TPFNP+Q+ +   I+L
Sbjct: 82  PSMVTPFNPYQLMMYRNIML 101


>Z67737-6|CAA91540.3|  399|Caenorhabditis elegans Hypothetical
           protein T01H10.7 protein.
          Length = 399

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 13/43 (30%), Positives = 24/43 (55%)
 Frame = +1

Query: 475 FNYFIRILFYYLQAYEYIEASFTIADRIYGIHFFHSNRVSWDS 603
           FNY + +  YYL+  E IE    ++  +    +++  R++WDS
Sbjct: 72  FNYTVSL--YYLKLVEVIEPEEKVSVVLEMAEYWYDPRIAWDS 112


>AF162674-1|AAF80462.1|  575|Caenorhabditis elegans CNT-like
           nucleoside transporter protein.
          Length = 575

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
 Frame = +2

Query: 536 LLQLLIEFMGSTFFIATGFHGI----PVIIGTLFLLICYIRHL 652
           LL  L+ + G  F +A G H      P+I  TLF  ICY+ +L
Sbjct: 52  LLIFLVVYHG--FLVAAGIHNYQKAAPLIYVTLFFWICYLLNL 92


>AF016413-4|AAM29683.1|  454|Caenorhabditis elegans Hypothetical
           protein F27E11.2b protein.
          Length = 454

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
 Frame = +2

Query: 536 LLQLLIEFMGSTFFIATGFHGI----PVIIGTLFLLICYIRHL 652
           LL  L+ + G  F +A G H      P+I  TLF  ICY+ +L
Sbjct: 52  LLIFLVVYHG--FLVAAGIHNYQKAAPLIYVTLFFWICYLLNL 92


>AF016413-3|AAB65256.3|  555|Caenorhabditis elegans Hypothetical
           protein F27E11.2a protein.
          Length = 555

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
 Frame = +2

Query: 536 LLQLLIEFMGSTFFIATGFHGI----PVIIGTLFLLICYIRHL 652
           LL  L+ + G  F +A G H      P+I  TLF  ICY+ +L
Sbjct: 52  LLIFLVVYHG--FLVAAGIHNYQKAAPLIYVTLFFWICYLLNL 92


>Z81119-2|CAB03332.1|  350|Caenorhabditis elegans Hypothetical
           protein T10H4.3 protein.
          Length = 350

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +2

Query: 440 ENNFSQTKQRLFLTILLGFYFTIYKHMNI*RLLLQL 547
           ++NF  T Q  F+ I++ F+ T+   M    LLLQL
Sbjct: 190 QSNFDLTNQLCFIEIIIRFFQTLLYPMLTLTLLLQL 225


>AJ277649-1|CAB90211.1|  917|Caenorhabditis elegans CHE-14 protein
           protein.
          Length = 917

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = +2

Query: 566 STFFIATGFHGIPVIIGTLFLLICYIRHLNNHFSKNHHF 682
           ST F+AT ++  P+     F  + Y   L      NH F
Sbjct: 669 STSFLATSYNDTPIFDNKTFAFVGYTAMLPTSLKYNHRF 707


>AF067618-5|AAC19198.2|  917|Caenorhabditis elegans Abnormal
           chemotaxis protein 14 protein.
          Length = 917

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = +2

Query: 566 STFFIATGFHGIPVIIGTLFLLICYIRHLNNHFSKNHHF 682
           ST F+AT ++  P+     F  + Y   L      NH F
Sbjct: 669 STSFLATSYNDTPIFDNKTFAFVGYTAMLPTSLKYNHRF 707


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,655,363
Number of Sequences: 27780
Number of extensions: 191154
Number of successful extensions: 593
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 589
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 593
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)