Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0598
         (677 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-3622|AAF47022.3|  406|Drosophila melanogaster CG33150-P...    29   5.8  
BT021434-1|AAX33582.1|  501|Drosophila melanogaster GH21414p pro...    29   7.7  
AY060777-1|AAL28325.1|  698|Drosophila melanogaster GH24192p pro...    29   7.7  
AY060636-1|AAL28184.1|  501|Drosophila melanogaster GH05289p pro...    29   7.7  
AJ291604-1|CAC20096.1| 1092|Drosophila melanogaster gamma-tubuli...    29   7.7  
AE014298-2158|ABC67184.1|  501|Drosophila melanogaster CG9201-PC...    29   7.7  
AE014298-2157|AAF48460.2| 1092|Drosophila melanogaster CG9201-PB...    29   7.7  
AE014296-1414|AAF50450.2|  698|Drosophila melanogaster CG13671-P...    29   7.7  

>AE013599-3622|AAF47022.3|  406|Drosophila melanogaster CG33150-PA
           protein.
          Length = 406

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 12/50 (24%), Positives = 28/50 (56%)
 Frame = -3

Query: 438 LFDESLLLCLVFYYSNWTEKSTVHYGVFNLNYHYFIIFN*VNAVSCYENY 289
           LF   +  CL  +++ WT K  V+  + ++N   +++ N ++++S  + Y
Sbjct: 157 LFLVGIFACLAIFFNIWTHKFVVYRSILSIN--SYVMPNIISSISFAQYY 204


>BT021434-1|AAX33582.1|  501|Drosophila melanogaster GH21414p
           protein.
          Length = 501

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -2

Query: 169 D*NTDWRIMSQFKWRKWKLK 110
           D N+ WR+M + KW  WKL+
Sbjct: 290 DYNSVWRLMLKVKWAVWKLE 309


>AY060777-1|AAL28325.1|  698|Drosophila melanogaster GH24192p
           protein.
          Length = 698

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 12/50 (24%), Positives = 25/50 (50%)
 Frame = -3

Query: 417 LCLVFYYSNWTEKSTVHYGVFNLNYHYFIIFN*VNAVSCYENYPNSNKRI 268
           + L+FYY +W  ++     V+N   HY+  +    A+ C+    N ++ +
Sbjct: 50  ISLLFYYVSWASEARQARLVYNGLAHYYQEYGFFGAIDCWHLQCNCSRTL 99


>AY060636-1|AAL28184.1|  501|Drosophila melanogaster GH05289p
           protein.
          Length = 501

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -2

Query: 169 D*NTDWRIMSQFKWRKWKLK 110
           D N+ WR+M + KW  WKL+
Sbjct: 290 DYNSVWRLMLKVKWAVWKLE 309


>AJ291604-1|CAC20096.1| 1092|Drosophila melanogaster gamma-tubulin
           ring protein protein.
          Length = 1092

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -2

Query: 169 D*NTDWRIMSQFKWRKWKLK 110
           D N+ WR+M + KW  WKL+
Sbjct: 881 DYNSVWRLMLKVKWAVWKLE 900


>AE014298-2158|ABC67184.1|  501|Drosophila melanogaster CG9201-PC,
           isoform C protein.
          Length = 501

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -2

Query: 169 D*NTDWRIMSQFKWRKWKLK 110
           D N+ WR+M + KW  WKL+
Sbjct: 290 DYNSVWRLMLKVKWAVWKLE 309


>AE014298-2157|AAF48460.2| 1092|Drosophila melanogaster CG9201-PB,
           isoform B protein.
          Length = 1092

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -2

Query: 169 D*NTDWRIMSQFKWRKWKLK 110
           D N+ WR+M + KW  WKL+
Sbjct: 881 DYNSVWRLMLKVKWAVWKLE 900


>AE014296-1414|AAF50450.2|  698|Drosophila melanogaster CG13671-PA
           protein.
          Length = 698

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 12/50 (24%), Positives = 25/50 (50%)
 Frame = -3

Query: 417 LCLVFYYSNWTEKSTVHYGVFNLNYHYFIIFN*VNAVSCYENYPNSNKRI 268
           + L+FYY +W  ++     V+N   HY+  +    A+ C+    N ++ +
Sbjct: 50  ISLLFYYVSWASEARQARLVYNGLAHYYQEYGFFGAIDCWHLQCNCSRTL 99


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,969,783
Number of Sequences: 53049
Number of extensions: 381717
Number of successful extensions: 548
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 540
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 548
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2951284050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)