Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0597
         (661 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    27   0.18 
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   3.9  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   3.9  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    22   3.9  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    22   5.1  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    22   5.1  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    22   5.1  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    22   5.1  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    21   6.8  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   9.0  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 26.6 bits (56), Expect = 0.18
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = +1

Query: 298 SSNAFRFEGRGSRCNYTEILEFISQSGWRI 387
           + N+ ++ G      Y EI+E   + GW++
Sbjct: 284 AGNSGKYTGEAGMLGYNEIVELQKEGGWKV 313


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 304 NAFRFEGRGSRCNYTEILEFISQSGW 381
           +A R+ G      Y EI+E  +  GW
Sbjct: 290 DAGRYTGERGMMGYNEIVEAQNAGGW 315


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 560 EKSLSYRYKFSYYENN 513
           +K+  Y  K  YYENN
Sbjct: 426 QKNAEYSGKVGYYENN 441


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 560 EKSLSYRYKFSYYENN 513
           +K+  Y  K  YYENN
Sbjct: 374 QKNAEYSGKVGYYENN 389


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = +3

Query: 618 GFLFALICD 644
           GFLF LICD
Sbjct: 15  GFLFLLICD 23


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 5/11 (45%), Positives = 8/11 (72%)
 Frame = -3

Query: 35  CLLYMYIFCSC 3
           CL  +++FC C
Sbjct: 292 CLFLLFVFCDC 302


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 5/11 (45%), Positives = 8/11 (72%)
 Frame = -3

Query: 35  CLLYMYIFCSC 3
           CL  +++FC C
Sbjct: 292 CLFLLFVFCDC 302


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 5/11 (45%), Positives = 8/11 (72%)
 Frame = -3

Query: 35  CLLYMYIFCSC 3
           CL  +++FC C
Sbjct: 292 CLFLLFVFCDC 302


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = -2

Query: 318 EPKRVTASRQKXAGRWYLPARITRRPTTSKYP 223
           EP++ T S+      W    R + RP++ + P
Sbjct: 178 EPEKKTESQPMLWPAWVYCTRYSDRPSSGRSP 209


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -2

Query: 420 WLLEPIDIYNVNAPPTLRYK 361
           WL  P  + N   P +LR+K
Sbjct: 7   WLTPPHSLGNTVTPVSLRFK 26


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,458
Number of Sequences: 336
Number of extensions: 2659
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17073220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)