Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0597
         (661 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            26   1.2  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            26   1.2  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            24   3.7  
AJ697727-1|CAG26920.1|  285|Anopheles gambiae putative odorant-b...    23   8.5  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -2

Query: 474  YILLLRWVDELTSQLVVKWLLEPIDIYNVNAPPT 373
            ++L L W  E+  Q  +  L+E +  Y  N P T
Sbjct: 943  HLLHLNWKHEVHRQSTIDVLIEDLHTYTFNPPET 976


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -2

Query: 474  YILLLRWVDELTSQLVVKWLLEPIDIYNVNAPPT 373
            ++L L W  E+  Q  +  L+E +  Y  N P T
Sbjct: 944  HLLHLNWKHEVHRQSTIDVLIEDLHTYTFNPPET 977


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
 Frame = -3

Query: 563  KEKSLSYRYKFSYYENNRKISHA--LHY*EKNIFYYLD 456
            KE  L ++Y FS  + ++++SH   + Y +K ++  LD
Sbjct: 3239 KEIKLGFKYIFSRPKRDQQVSHTDMVEYEKKMLYCRLD 3276


>AJ697727-1|CAG26920.1|  285|Anopheles gambiae putative
           odorant-binding protein OBPjj17 protein.
          Length = 285

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 293 GRNXQGGGTYPRGSQ 249
           G+  Q GG YPRG++
Sbjct: 253 GQYDQRGGNYPRGTE 267


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 597,226
Number of Sequences: 2352
Number of extensions: 10670
Number of successful extensions: 15
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65650335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)