Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0597
         (661 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g19550.1 68415.m02284 esterase/lipase/thioesterase family pro...    28   4.8  
At1g65230.1 68414.m07395 expressed protein                             28   6.3  

>At2g19550.1 68415.m02284 esterase/lipase/thioesterase family
           protein low similarity to cinnamoyl ester hydrolase CinI
           [Butyrivibrio fibrisolvens] GI:1622732; contains
           esterase/lipase/thioesterase active site serine
           (PS50187) (Interpro entry IPR000379) and alpha/beta
           hydrolase fold (PF00561).
          Length = 332

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 10/47 (21%)
 Frame = -3

Query: 596 KCLNSIAT*IEKEKSLSYRYKFS---------YYEN-NRKISHALHY 486
           K L ++AT +EKEK  S+R+ FS         YY N N +    LHY
Sbjct: 42  KILKNVATALEKEKISSFRFDFSGNGDSEGTFYYGNFNSEAEDDLHY 88


>At1g65230.1 68414.m07395 expressed protein
          Length = 286

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 19/56 (33%), Positives = 28/56 (50%)
 Frame = +2

Query: 320 KGGAAVVTIPRS*NLYLKVGGAFTL*MSMGSSNHLTTSWDVSSSTHLSNKIYFFLS 487
           KG    +    S +L +KV   FTL    G       SWD+SSS+ ++ + YF+ S
Sbjct: 157 KGKPKSILAAVSGDLIVKVKSEFTLNQISGQVFEHEESWDLSSSSPIA-QAYFWTS 211


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,935,865
Number of Sequences: 28952
Number of extensions: 218041
Number of successful extensions: 451
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 443
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 451
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1383534864
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)