Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0596
(727 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 114 2e-24
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 114 2e-24
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 106 5e-22
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 105 1e-21
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 105 1e-21
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 102 1e-20
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 102 1e-20
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 102 1e-20
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 101 1e-20
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 101 2e-20
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 97 3e-19
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 97 3e-19
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 97 3e-19
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 97 4e-19
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 97 4e-19
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 97 4e-19
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 95 1e-18
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 95 1e-18
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 95 2e-18
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 94 3e-18
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 91 3e-17
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 90 4e-17
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 89 8e-17
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 87 3e-16
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 87 3e-16
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 86 7e-16
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 83 9e-15
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 83 9e-15
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 83 9e-15
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 83 9e-15
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 81 3e-14
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 80 5e-14
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 79 1e-13
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 71 3e-11
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 67 4e-10
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 67 5e-10
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 61 2e-08
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 61 3e-08
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 60 4e-08
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 60 4e-08
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 56 9e-07
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 56 1e-06
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 55 2e-06
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 53 6e-06
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 52 1e-05
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 51 3e-05
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 51 3e-05
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 50 4e-05
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 50 4e-05
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 50 4e-05
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 50 8e-05
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 50 8e-05
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 49 1e-04
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 49 1e-04
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 49 1e-04
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 49 1e-04
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 48 2e-04
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 48 2e-04
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 48 3e-04
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 48 3e-04
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 47 4e-04
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 47 5e-04
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 46 7e-04
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 46 0.001
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 46 0.001
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 46 0.001
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 45 0.002
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 44 0.005
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 44 0.005
UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach... 43 0.007
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 43 0.009
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 43 0.009
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 42 0.012
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 42 0.012
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 42 0.016
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 42 0.016
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 42 0.016
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 41 0.027
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 41 0.036
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 41 0.036
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 40 0.047
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 40 0.047
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 40 0.063
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 40 0.063
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 39 0.11
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 39 0.11
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 39 0.14
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 39 0.14
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 39 0.14
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 39 0.14
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 38 0.19
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 38 0.25
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 36 1.0
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 36 1.3
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 35 2.4
UniRef50_Q6PW10 Cluster: Cytochrome oxidase subunit I; n=1; Boha... 34 4.1
UniRef50_Q2ABI9 Cluster: NADH-ubiquinone oxidoreductase chain 2;... 33 5.4
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 33 5.4
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 114 bits (275), Expect = 2e-24
Identities = 57/80 (71%), Positives = 62/80 (77%)
Frame = +2
Query: 257 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 436
L+LGAPD+AFPR+NN+ F IVENGAGTG TVYPPLSSNIAH G SVD
Sbjct: 82 LMLGAPDMAFPRMNNMSFWLLPPSLTLLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVD 141
Query: 437 LAIFSLHLAGISSIIGAINF 496
LAIFSLHLAGISSI+GAINF
Sbjct: 142 LAIFSLHLAGISSILGAINF 161
Score = 57.6 bits (133), Expect = 3e-07
Identities = 29/50 (58%), Positives = 30/50 (60%)
Frame = +3
Query: 42 RDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHA 191
+DIGTLY AELG PGSLIGDDQIYNTIVTAHA
Sbjct: 10 KDIGTLYFIFGIWAGMVGTSLSLLIRAELGTPGSLIGDDQIYNTIVTAHA 59
Score = 56.8 bits (131), Expect = 5e-07
Identities = 22/33 (66%), Positives = 24/33 (72%)
Frame = +3
Query: 627 IINRSKLKYIIFDPAGGGDPILYPHLFWFFGHP 725
++ L FDPAGGGDPILY HLFWFFGHP
Sbjct: 206 LLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHP 238
Score = 54.8 bits (126), Expect = 2e-06
Identities = 28/41 (68%), Positives = 30/41 (73%)
Frame = +1
Query: 538 DQLPLFG*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 660
DQ+PLF AVGITAF AGAIT+LLTDRNLNTSF
Sbjct: 176 DQMPLFVWAVGITAFLLLLSLPVLAGAITMLLTDRNLNTSF 216
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 114 bits (275), Expect = 2e-24
Identities = 57/80 (71%), Positives = 62/80 (77%)
Frame = +2
Query: 257 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 436
L+LGAPD+AFPR+NN+ F IVENGAGTG TVYPPLSSNIAH G SVD
Sbjct: 58 LMLGAPDMAFPRMNNMSFWLLPPSLILLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVD 117
Query: 437 LAIFSLHLAGISSIIGAINF 496
LAIFSLHLAGISSI+GAINF
Sbjct: 118 LAIFSLHLAGISSILGAINF 137
Score = 56.8 bits (131), Expect = 5e-07
Identities = 22/33 (66%), Positives = 24/33 (72%)
Frame = +3
Query: 627 IINRSKLKYIIFDPAGGGDPILYPHLFWFFGHP 725
++ L FDPAGGGDPILY HLFWFFGHP
Sbjct: 182 LLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHP 214
Score = 52.0 bits (119), Expect = 1e-05
Identities = 27/41 (65%), Positives = 29/41 (70%)
Frame = +1
Query: 538 DQLPLFG*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 660
DQ+PLF AVGITA AGAIT+LLTDRNLNTSF
Sbjct: 152 DQMPLFIWAVGITALLLLLSLPVLAGAITMLLTDRNLNTSF 192
Score = 50.0 bits (114), Expect = 6e-05
Identities = 22/23 (95%), Positives = 22/23 (95%)
Frame = +3
Query: 123 ELGNPGSLIGDDQIYNTIVTAHA 191
ELG PGSLIGDDQIYNTIVTAHA
Sbjct: 13 ELGTPGSLIGDDQIYNTIVTAHA 35
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 106 bits (255), Expect = 5e-22
Identities = 51/80 (63%), Positives = 59/80 (73%)
Frame = +2
Query: 257 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 436
L+LGAPD+AFPR+NN+ F VE+GAGTG TVYPPLS N AH G SVD
Sbjct: 68 LMLGAPDMAFPRLNNMSFWFLPPSLSLLLMSAAVESGAGTGWTVYPPLSGNTAHAGPSVD 127
Query: 437 LAIFSLHLAGISSIIGAINF 496
LAIFSLHLAG+SSI+GA+NF
Sbjct: 128 LAIFSLHLAGVSSILGAVNF 147
Score = 43.2 bits (97), Expect = 0.007
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = +3
Query: 123 ELGNPGSLIGDDQIYNTIVTAHA 191
ELG PGS IG+DQ+YN +VTAHA
Sbjct: 23 ELGQPGSFIGNDQLYNVVVTAHA 45
Score = 43.2 bits (97), Expect = 0.007
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = +3
Query: 660 FDPAGGGDPILYPHLFW 710
FDPAGGGDPILY HLFW
Sbjct: 203 FDPAGGGDPILYQHLFW 219
Score = 38.3 bits (85), Expect = 0.19
Identities = 21/37 (56%), Positives = 23/37 (62%)
Frame = +1
Query: 550 LFG*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 660
LF +V ITA AGAIT+LLTDRN NTSF
Sbjct: 166 LFVWSVKITAILLLLSLPVLAGAITMLLTDRNFNTSF 202
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 105 bits (252), Expect = 1e-21
Identities = 52/80 (65%), Positives = 60/80 (75%)
Frame = +2
Query: 257 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 436
L++GAPD+AFPR+NN+ F VE GAGTG TVYPPL+ N+AH G SVD
Sbjct: 86 LMIGAPDMAFPRMNNMSFWLXPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVD 145
Query: 437 LAIFSLHLAGISSIIGAINF 496
LAIFSLHLAGISSI+GAINF
Sbjct: 146 LAIFSLHLAGISSILGAINF 165
Score = 57.2 bits (132), Expect = 4e-07
Identities = 22/33 (66%), Positives = 24/33 (72%)
Frame = +3
Query: 627 IINRSKLKYIIFDPAGGGDPILYPHLFWFFGHP 725
++ L FDPAGGGDPILY HLFWFFGHP
Sbjct: 210 LLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHP 242
Score = 53.6 bits (123), Expect = 5e-06
Identities = 26/50 (52%), Positives = 29/50 (58%)
Frame = +3
Query: 42 RDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHA 191
+DIGTLY AELG PG+L+GDDQIYN IVTAHA
Sbjct: 14 KDIGTLYLIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHA 63
Score = 37.9 bits (84), Expect = 0.25
Identities = 21/40 (52%), Positives = 24/40 (60%)
Frame = +1
Query: 541 QLPLFG*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 660
Q PLF +V ITA A IT+LLTDRNLNT+F
Sbjct: 181 QTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTF 220
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 105 bits (252), Expect = 1e-21
Identities = 50/79 (63%), Positives = 60/79 (75%)
Frame = -2
Query: 495 KLIAPIIDEIPAKCSEKIARSTDLPLCAILDESGG*TVHPVPAPFSTILLEINNIREGGR 316
K AP I+E PAKC+EKI STD P CAI SGG TVHPVP P STI L + ++EGG
Sbjct: 71 KFTAPKIEETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLSTIPLNKSKVKEGGS 130
Query: 315 SQNLILFIRGNAISGAPSI 259
+QNL+LFIRGNA+SGAP++
Sbjct: 131 NQNLMLFIRGNAMSGAPNM 149
Score = 70.1 bits (164), Expect = 5e-11
Identities = 39/67 (58%), Positives = 42/67 (62%)
Frame = -1
Query: 253 TNQFPNPPXXXXXXXXXXXXKACAVTIVL*I*SSPINDPGFPNSARIKSLKDVPIIPDQI 74
TNQFPNPP KA AVT+ L I S PI PG PNSARIKSL DVP +P
Sbjct: 152 TNQFPNPPIMIGMTMKKIITKAWAVTMTL-IWSFPIKLPGCPNSARIKSLSDVPTMPAHA 210
Query: 73 PKIKYNV 53
PK+KYNV
Sbjct: 211 PKMKYNV 217
Score = 50.4 bits (115), Expect = 4e-05
Identities = 24/39 (61%), Positives = 29/39 (74%)
Frame = -3
Query: 662 KNDVFKFRSVNNIVIAPAKTGSDNNNKNAVIPTAHPNKG 546
K +VFKFRSV +IVIAPA TGS++N+K AV T N G
Sbjct: 15 KKEVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQTNSG 53
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 102 bits (244), Expect = 1e-20
Identities = 49/80 (61%), Positives = 58/80 (72%)
Frame = +2
Query: 257 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 436
L++GAPD+AFPR+NN+ F +E GAGTG TVYPPL+ N+AH G SVD
Sbjct: 74 LMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGIEAGAGTGWTVYPPLAGNLAHAGASVD 133
Query: 437 LAIFSLHLAGISSIIGAINF 496
L IFSLHLAGISSI+GAINF
Sbjct: 134 LTIFSLHLAGISSILGAINF 153
Score = 51.2 bits (117), Expect = 3e-05
Identities = 25/50 (50%), Positives = 28/50 (56%)
Frame = +3
Query: 42 RDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHA 191
+DIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 2 KDIGTLYLIFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHA 51
Score = 39.1 bits (87), Expect = 0.11
Identities = 22/40 (55%), Positives = 24/40 (60%)
Frame = +1
Query: 541 QLPLFG*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 660
Q PLF AV ITA A IT+LLTDRNLNT+F
Sbjct: 169 QTPLFVWAVLITAVLLLLSLPVLAAGITMLLTDRNLNTTF 208
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 102 bits (244), Expect = 1e-20
Identities = 49/80 (61%), Positives = 58/80 (72%)
Frame = +2
Query: 257 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 436
L++GAPD+AFPR+NN+ F VE GAGTG TVYPPL+ N+AH G SVD
Sbjct: 85 LMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVD 144
Query: 437 LAIFSLHLAGISSIIGAINF 496
L IFSLHLAG+SSI+GAINF
Sbjct: 145 LTIFSLHLAGVSSILGAINF 164
Score = 57.2 bits (132), Expect = 4e-07
Identities = 22/33 (66%), Positives = 24/33 (72%)
Frame = +3
Query: 627 IINRSKLKYIIFDPAGGGDPILYPHLFWFFGHP 725
++ L FDPAGGGDPILY HLFWFFGHP
Sbjct: 209 LLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHP 241
Score = 51.2 bits (117), Expect = 3e-05
Identities = 25/50 (50%), Positives = 28/50 (56%)
Frame = +3
Query: 42 RDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHA 191
+DIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 13 KDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHA 62
Score = 37.5 bits (83), Expect = 0.33
Identities = 20/40 (50%), Positives = 24/40 (60%)
Frame = +1
Query: 541 QLPLFG*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 660
Q PLF +V +TA A IT+LLTDRNLNT+F
Sbjct: 180 QTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTF 219
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 102 bits (244), Expect = 1e-20
Identities = 49/80 (61%), Positives = 58/80 (72%)
Frame = +2
Query: 257 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 436
L++GAPD+AFPR+NN+ F VE GAGTG TVYPPL+ N+AH G SVD
Sbjct: 85 LMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVD 144
Query: 437 LAIFSLHLAGISSIIGAINF 496
L IFSLHLAG+SSI+GAINF
Sbjct: 145 LTIFSLHLAGVSSILGAINF 164
Score = 57.2 bits (132), Expect = 4e-07
Identities = 22/33 (66%), Positives = 24/33 (72%)
Frame = +3
Query: 627 IINRSKLKYIIFDPAGGGDPILYPHLFWFFGHP 725
++ L FDPAGGGDPILY HLFWFFGHP
Sbjct: 209 LLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHP 241
Score = 51.2 bits (117), Expect = 3e-05
Identities = 25/50 (50%), Positives = 28/50 (56%)
Frame = +3
Query: 42 RDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHA 191
+DIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 13 KDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHA 62
Score = 38.7 bits (86), Expect = 0.14
Identities = 21/40 (52%), Positives = 24/40 (60%)
Frame = +1
Query: 541 QLPLFG*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 660
Q PLF AV +TA A IT+LLTDRNLNT+F
Sbjct: 180 QTPLFVWAVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTF 219
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 101 bits (243), Expect = 1e-20
Identities = 49/80 (61%), Positives = 59/80 (73%)
Frame = +2
Query: 257 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 436
L++GAPD+AFPR+NNI F +VE GAGTG TVYPPL+S AH G SVD
Sbjct: 86 LMIGAPDMAFPRLNNISFWLLPPALFLLLGSSLVEQGAGTGWTVYPPLASIQAHSGGSVD 145
Query: 437 LAIFSLHLAGISSIIGAINF 496
+AIFSLHLAG+SSI+GA+NF
Sbjct: 146 MAIFSLHLAGLSSILGAMNF 165
Score = 50.4 bits (115), Expect = 4e-05
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +3
Query: 660 FDPAGGGDPILYPHLFWFFG 719
FDPAGGGDPILY HLFWFFG
Sbjct: 221 FDPAGGGDPILYQHLFWFFG 240
Score = 45.6 bits (103), Expect = 0.001
Identities = 21/50 (42%), Positives = 27/50 (54%)
Frame = +3
Query: 42 RDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHA 191
+DIG+LY EL +PGS++GDD +YN IVTAHA
Sbjct: 14 KDIGSLYLVFGALSGAIGTAFSMLIRLELSSPGSMLGDDHLYNVIVTAHA 63
Score = 37.1 bits (82), Expect = 0.44
Identities = 20/40 (50%), Positives = 25/40 (62%)
Frame = +1
Query: 541 QLPLFG*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 660
++PLF +V ITA AGAIT+LLTDR NT+F
Sbjct: 181 RIPLFVWSVLITAILLLLSLPVLAGAITMLLTDRYFNTTF 220
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 101 bits (242), Expect = 2e-20
Identities = 48/80 (60%), Positives = 58/80 (72%)
Frame = +2
Query: 257 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 436
L++GAPD+AFPR+NN+ F +VE GAGTG TVYPPL+ N +H G SVD
Sbjct: 85 LMIGAPDMAFPRMNNMSFWLLPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVD 144
Query: 437 LAIFSLHLAGISSIIGAINF 496
L IFSLHLAG+SSI+GAINF
Sbjct: 145 LTIFSLHLAGVSSILGAINF 164
Score = 57.2 bits (132), Expect = 4e-07
Identities = 22/33 (66%), Positives = 24/33 (72%)
Frame = +3
Query: 627 IINRSKLKYIIFDPAGGGDPILYPHLFWFFGHP 725
++ L FDPAGGGDPILY HLFWFFGHP
Sbjct: 209 LLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHP 241
Score = 49.6 bits (113), Expect = 8e-05
Identities = 24/50 (48%), Positives = 28/50 (56%)
Frame = +3
Query: 42 RDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHA 191
+DIGTLY AELG PG+L+G+D IYN IVTAHA
Sbjct: 13 KDIGTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHA 62
Score = 37.9 bits (84), Expect = 0.25
Identities = 21/40 (52%), Positives = 24/40 (60%)
Frame = +1
Query: 541 QLPLFG*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 660
Q PLF +V ITA A IT+LLTDRNLNT+F
Sbjct: 180 QTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTF 219
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 97.5 bits (232), Expect = 3e-19
Identities = 47/80 (58%), Positives = 57/80 (71%)
Frame = +2
Query: 257 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 436
+++GAPD+AFPR+NNI F VE GAGTG TVYPPLS +H G SVD
Sbjct: 85 VMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVD 144
Query: 437 LAIFSLHLAGISSIIGAINF 496
LAIFSLHL+GISS++GA+NF
Sbjct: 145 LAIFSLHLSGISSMLGAMNF 164
Score = 55.2 bits (127), Expect = 2e-06
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = +3
Query: 660 FDPAGGGDPILYPHLFWFFGHP 725
+DPAGGGDPILY HLFWFFGHP
Sbjct: 220 YDPAGGGDPILYQHLFWFFGHP 241
Score = 43.2 bits (97), Expect = 0.007
Identities = 22/40 (55%), Positives = 26/40 (65%)
Frame = +1
Query: 541 QLPLFG*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 660
+LPLF A+ +TA AGAIT+LLTDRN NTSF
Sbjct: 180 KLPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSF 219
Score = 35.9 bits (79), Expect = 1.0
Identities = 21/52 (40%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = +3
Query: 42 RDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHA 191
+DIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 11 KDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHA 62
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 97.5 bits (232), Expect = 3e-19
Identities = 47/80 (58%), Positives = 57/80 (71%)
Frame = +2
Query: 257 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 436
+++GAPD+AFPR+NNI F VE GAGTG TVYPPLS +H G SVD
Sbjct: 85 VMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVD 144
Query: 437 LAIFSLHLAGISSIIGAINF 496
LAIFSLHL+GISS++GA+NF
Sbjct: 145 LAIFSLHLSGISSMLGAMNF 164
Score = 43.2 bits (97), Expect = 0.007
Identities = 22/40 (55%), Positives = 26/40 (65%)
Frame = +1
Query: 541 QLPLFG*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 660
+LPLF A+ +TA AGAIT+LLTDRN NTSF
Sbjct: 180 KLPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSF 219
Score = 37.5 bits (83), Expect = 0.33
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +3
Query: 660 FDPAGGGDPILYPHLF 707
+DPAGGGDPILY HLF
Sbjct: 220 YDPAGGGDPILYQHLF 235
Score = 35.9 bits (79), Expect = 1.0
Identities = 21/52 (40%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = +3
Query: 42 RDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHA 191
+DIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 11 KDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHA 62
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 97.5 bits (232), Expect = 3e-19
Identities = 47/80 (58%), Positives = 57/80 (71%)
Frame = +2
Query: 257 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 436
+++GAPD+AFPR+NNI F VE GAGTG TVYPPLS +H G SVD
Sbjct: 85 VMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVD 144
Query: 437 LAIFSLHLAGISSIIGAINF 496
LAIFSLHL+GISS++GA+NF
Sbjct: 145 LAIFSLHLSGISSMLGAMNF 164
Score = 35.9 bits (79), Expect = 1.0
Identities = 21/52 (40%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = +3
Query: 42 RDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHA 191
+DIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 11 KDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHA 62
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 97.1 bits (231), Expect = 4e-19
Identities = 49/80 (61%), Positives = 56/80 (70%)
Frame = +2
Query: 257 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 436
L++GA D AFPRINNI F +VE+GAGTG TVYPPLSS AH G SVD
Sbjct: 86 LMIGATDTAFPRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVD 145
Query: 437 LAIFSLHLAGISSIIGAINF 496
LAIF+LHL ISS++GAINF
Sbjct: 146 LAIFALHLTSISSLLGAINF 165
Score = 50.0 bits (114), Expect = 6e-05
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = +3
Query: 660 FDPAGGGDPILYPHLFWFFGHP 725
F+ +GGGDPILY HLFWFFGHP
Sbjct: 221 FEVSGGGDPILYEHLFWFFGHP 242
Score = 37.9 bits (84), Expect = 0.25
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +1
Query: 541 QLPLFG*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFL-IRLEEETQFYIHIYFGF 714
+LPLF ++ ITAF + IT+LL DRN NTSF + + Y H+++ F
Sbjct: 181 KLPLFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFF 239
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 97.1 bits (231), Expect = 4e-19
Identities = 49/80 (61%), Positives = 56/80 (70%)
Frame = +2
Query: 257 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 436
L++GA D AFPRINNI F +VE+GAGTG TVYPPLSS AH G SVD
Sbjct: 86 LMIGATDTAFPRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVD 145
Query: 437 LAIFSLHLAGISSIIGAINF 496
LAIF+LHL ISS++GAINF
Sbjct: 146 LAIFALHLTSISSLLGAINF 165
Score = 44.0 bits (99), Expect = 0.004
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +3
Query: 660 FDPAGGGDPILYPHLFWFFG 719
F+ +GGGDPILY HLFWFFG
Sbjct: 221 FEVSGGGDPILYEHLFWFFG 240
Score = 37.9 bits (84), Expect = 0.25
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +1
Query: 541 QLPLFG*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFL-IRLEEETQFYIHIYFGF 714
+LPLF ++ ITAF + IT+LL DRN NTSF + + Y H+++ F
Sbjct: 181 KLPLFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFF 239
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 97.1 bits (231), Expect = 4e-19
Identities = 45/80 (56%), Positives = 58/80 (72%)
Frame = +2
Query: 257 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 436
+++GAPD+AFPR+NNI F +VE G+GTG TVYPPLS +H G +VD
Sbjct: 88 ILIGAPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHSGGAVD 147
Query: 437 LAIFSLHLAGISSIIGAINF 496
LAIFSLHL+G+SSI+G+INF
Sbjct: 148 LAIFSLHLSGVSSILGSINF 167
Score = 56.4 bits (130), Expect = 7e-07
Identities = 21/22 (95%), Positives = 21/22 (95%)
Frame = +3
Query: 660 FDPAGGGDPILYPHLFWFFGHP 725
FDPAGGGDPILY HLFWFFGHP
Sbjct: 223 FDPAGGGDPILYQHLFWFFGHP 244
Score = 43.2 bits (97), Expect = 0.007
Identities = 22/40 (55%), Positives = 27/40 (67%)
Frame = +1
Query: 541 QLPLFG*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 660
+LPLF +V +TAF AGAIT+LLTDRN NT+F
Sbjct: 183 RLPLFVWSVLVTAFLLLLSLPVLAGAITMLLTDRNFNTTF 222
Score = 35.1 bits (77), Expect = 1.8
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = +3
Query: 42 RDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHA 191
+DIGTLY EL PG I G+ Q+YN ++TAHA
Sbjct: 14 KDIGTLYFIFGAIAGVMGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHA 65
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 95.5 bits (227), Expect = 1e-18
Identities = 50/81 (61%), Positives = 56/81 (69%)
Frame = +2
Query: 254 SLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSV 433
+L LGAPD FPR N+ F VE GAGTG TV PPLS+NIAH G SV
Sbjct: 3 TLXLGAPDXXFPRXINMSFWFLPPXLSFFLXSSXVEKGAGTGWTVSPPLSANIAHEGSSV 62
Query: 434 DLAIFSLHLAGISSIIGAINF 496
DLAIFSLH+AG+ SI+GAINF
Sbjct: 63 DLAIFSLHMAGVXSILGAINF 83
Score = 50.8 bits (116), Expect = 3e-05
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = +3
Query: 660 FDPAGGGDPILYPHLFWFFGH 722
FDPAGGGDPILY HLFWF GH
Sbjct: 139 FDPAGGGDPILYQHLFWFXGH 159
Score = 44.4 bits (100), Expect = 0.003
Identities = 23/40 (57%), Positives = 27/40 (67%)
Frame = +1
Query: 541 QLPLFG*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 660
++PLF AV ITA AGAIT+LLTDRN+NTSF
Sbjct: 99 RMPLFVWAVEITAILLLLSLPVLAGAITMLLTDRNINTSF 138
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 95.5 bits (227), Expect = 1e-18
Identities = 48/80 (60%), Positives = 57/80 (71%)
Frame = +2
Query: 257 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 436
L++GA D++FPRIN+I F +VE+GAGTG TVYPPLSS AH G SVD
Sbjct: 86 LMIGATDMSFPRINSIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVD 145
Query: 437 LAIFSLHLAGISSIIGAINF 496
LAIFSLHL ISS++GAINF
Sbjct: 146 LAIFSLHLTSISSLLGAINF 165
Score = 47.6 bits (108), Expect = 3e-04
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = +3
Query: 660 FDPAGGGDPILYPHLFWFFGHP 725
F+ AGGGDPI Y H FWFFGHP
Sbjct: 221 FEVAGGGDPIFYQHAFWFFGHP 242
Score = 39.5 bits (88), Expect = 0.083
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +1
Query: 541 QLPLFG*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFL-IRLEEETQFYIHIYFGF 714
++PLF A+ ITAF + IT+LL DRN NTSF + + FY H ++ F
Sbjct: 181 KMPLFVWAIFITAFLLLLSLPVLSAGITMLLMDRNFNTSFFEVAGGGDPIFYQHAFWFF 239
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 94.7 bits (225), Expect = 2e-18
Identities = 47/80 (58%), Positives = 56/80 (70%)
Frame = +2
Query: 257 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 436
L++GA D AFPRINNI F +VE+GAGTG TVYPPL+S AH G SVD
Sbjct: 86 LMIGATDTAFPRINNIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLASIQAHSGPSVD 145
Query: 437 LAIFSLHLAGISSIIGAINF 496
LAIF+LH+ ISS++GAINF
Sbjct: 146 LAIFALHMTSISSLLGAINF 165
Score = 45.2 bits (102), Expect = 0.002
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +3
Query: 660 FDPAGGGDPILYPHLFWFFG 719
F+ AGGGDPILY HLFWFFG
Sbjct: 221 FEVAGGGDPILYEHLFWFFG 240
Score = 35.5 bits (78), Expect = 1.3
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +1
Query: 541 QLPLFG*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFL-IRLEEETQFYIHIYFGF 714
+LPLF A+ ITA + +T+LL DRN NTSF + + Y H+++ F
Sbjct: 181 KLPLFVWAILITAVLLLLTLPVLSAGVTMLLLDRNFNTSFFEVAGGGDPILYEHLFWFF 239
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 94.3 bits (224), Expect = 3e-18
Identities = 44/80 (55%), Positives = 57/80 (71%)
Frame = +2
Query: 257 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 436
+++G+PD+AFPR+NNI F +VE G GTG TVYPPLSS +H G +VD
Sbjct: 93 IMIGSPDMAFPRLNNISFWLLPPSLCLLLMSALVEVGVGTGWTVYPPLSSIQSHSGGAVD 152
Query: 437 LAIFSLHLAGISSIIGAINF 496
LAIFSLH++G SSI+GA+NF
Sbjct: 153 LAIFSLHISGASSILGAVNF 172
Score = 52.0 bits (119), Expect = 1e-05
Identities = 19/22 (86%), Positives = 20/22 (90%)
Frame = +3
Query: 660 FDPAGGGDPILYPHLFWFFGHP 725
FD +GGGDPILY HLFWFFGHP
Sbjct: 228 FDASGGGDPILYQHLFWFFGHP 249
Score = 43.2 bits (97), Expect = 0.007
Identities = 21/40 (52%), Positives = 27/40 (67%)
Frame = +1
Query: 541 QLPLFG*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 660
++PLF ++ +TAF AGAIT+LLTDRN NTSF
Sbjct: 188 RIPLFVWSILVTAFLLLLAVPVLAGAITMLLTDRNFNTSF 227
Score = 35.5 bits (78), Expect = 1.3
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +3
Query: 42 RDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHA 191
+DIGTLY EL P + L+G+ QIYN ++TAHA
Sbjct: 19 KDIGTLYLIFGAFSGVLGGCMSMLIRMELAQPSNHLLLGNHQIYNVLITAHA 70
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 90.6 bits (215), Expect = 3e-17
Identities = 40/80 (50%), Positives = 53/80 (66%)
Frame = +2
Query: 257 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 436
+++G PD+AFPR+NN+ + I+ENG GTG T+YPPLS +H VD
Sbjct: 112 ILIGGPDMAFPRLNNVSYWLLIPSLFLFVFAAIIENGVGTGWTLYPPLSGIQSHSSMGVD 171
Query: 437 LAIFSLHLAGISSIIGAINF 496
L IF LHL+GISS++GAINF
Sbjct: 172 LGIFGLHLSGISSLLGAINF 191
Score = 46.8 bits (106), Expect = 5e-04
Identities = 18/33 (54%), Positives = 22/33 (66%)
Frame = +3
Query: 627 IINRSKLKYIIFDPAGGGDPILYPHLFWFFGHP 725
++ L ++ AGGGD ILY HLFWFFGHP
Sbjct: 236 LLTDRNLNTSFYELAGGGDAILYQHLFWFFGHP 268
Score = 43.6 bits (98), Expect = 0.005
Identities = 27/59 (45%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +1
Query: 541 QLPLFG*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFL-IRLEEETQFYIHIYFGF 714
+L LFG AV ITA A AIT+LLTDRNLNTSF + + Y H+++ F
Sbjct: 207 KLALFGWAVVITAVLLLLSLPVLAAAITMLLTDRNLNTSFYELAGGGDAILYQHLFWFF 265
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 90.2 bits (214), Expect = 4e-17
Identities = 43/80 (53%), Positives = 53/80 (66%)
Frame = +2
Query: 257 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 436
L+LG+PD++FPR+NN+ F + G GTG TVYPPLS + H G SVD
Sbjct: 69 LMLGSPDMSFPRMNNMSFWLLIPSLLLLILSMFINVGVGTGWTVYPPLSLILGHGGMSVD 128
Query: 437 LAIFSLHLAGISSIIGAINF 496
L IFSLHLAG SSI+GA+NF
Sbjct: 129 LGIFSLHLAGASSIMGAVNF 148
Score = 55.2 bits (127), Expect = 2e-06
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = +3
Query: 660 FDPAGGGDPILYPHLFWFFGHP 725
FDP+GGGDPILY HLFWFFGHP
Sbjct: 204 FDPSGGGDPILYQHLFWFFGHP 225
Score = 44.4 bits (100), Expect = 0.003
Identities = 19/23 (82%), Positives = 22/23 (95%)
Frame = +3
Query: 123 ELGNPGSLIGDDQIYNTIVTAHA 191
ELG PGSLIG+DQIYN+IVT+HA
Sbjct: 24 ELGMPGSLIGNDQIYNSIVTSHA 46
Score = 43.2 bits (97), Expect = 0.007
Identities = 22/41 (53%), Positives = 27/41 (65%)
Frame = +1
Query: 538 DQLPLFG*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 660
D++ LF +V ITA AGAIT+LLTDRN+NTSF
Sbjct: 163 DKMSLFSWSVFITAILLLLSLPVLAGAITMLLTDRNMNTSF 203
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 89.4 bits (212), Expect = 8e-17
Identities = 42/78 (53%), Positives = 52/78 (66%)
Frame = +2
Query: 263 LGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLA 442
LG PD+ FPR+NNI + +ENG GTG T+YPPLS +H G SVDLA
Sbjct: 88 LGGPDMGFPRLNNISYLLLIPSIVLFLFAGGIENGVGTGWTLYPPLSGIQSHSGPSVDLA 147
Query: 443 IFSLHLAGISSIIGAINF 496
IF LHL+GISS++GA+NF
Sbjct: 148 IFGLHLSGISSLLGAMNF 165
Score = 51.2 bits (117), Expect = 3e-05
Identities = 19/22 (86%), Positives = 20/22 (90%)
Frame = +3
Query: 660 FDPAGGGDPILYPHLFWFFGHP 725
F+ AGGGDPILY HLFWFFGHP
Sbjct: 221 FEVAGGGDPILYQHLFWFFGHP 242
Score = 38.7 bits (86), Expect = 0.14
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +1
Query: 541 QLPLFG*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFL-IRLEEETQFYIHIYFGF 714
+L LF AV ITA AG IT++LTDRN NTSF + + Y H+++ F
Sbjct: 181 KLILFAWAVVITAVLLLLSLPVLAGGITMVLTDRNFNTSFFEVAGGGDPILYQHLFWFF 239
Score = 35.9 bits (79), Expect = 1.0
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +3
Query: 42 RDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHA 191
+DIG LY EL PG I D+Q+YN+I+TAHA
Sbjct: 13 KDIGVLYLIYALFAGLIGTAFSVLIRLELSGPGVQYIADNQLYNSIITAHA 63
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 87.4 bits (207), Expect = 3e-16
Identities = 42/80 (52%), Positives = 50/80 (62%)
Frame = +2
Query: 257 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 436
+++GAPD++FPR+NN F E G GTG TVYPPLSS +H G SVD
Sbjct: 89 ILIGAPDMSFPRLNNFSFWLLPGAILLAVLATYSEGGPGTGWTVYPPLSSLQSHSGASVD 148
Query: 437 LAIFSLHLAGISSIIGAINF 496
L IFS HL GI SI+ AINF
Sbjct: 149 LMIFSFHLVGIGSIVAAINF 168
Score = 49.6 bits (113), Expect = 8e-05
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +3
Query: 660 FDPAGGGDPILYPHLFWFFGHP 725
+DP GGGD +LY HLFWFFGHP
Sbjct: 224 YDPVGGGDVVLYQHLFWFFGHP 245
Score = 39.9 bits (89), Expect = 0.063
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +1
Query: 544 LPLFG*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFLIRL-EEETQFYIHIYFGF 714
LPLF +V +T+F A AIT+LL DRN NTSF + + Y H+++ F
Sbjct: 185 LPLFVWSVAVTSFLVIVAIPVLAAAITLLLFDRNFNTSFYDPVGGGDVVLYQHLFWFF 242
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 87.4 bits (207), Expect = 3e-16
Identities = 43/84 (51%), Positives = 56/84 (66%), Gaps = 4/84 (4%)
Frame = +2
Query: 257 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV----YPPLSSNIAHRG 424
L++G PD+AFPR+NNI F I+E G GTG T+ YPPLS +H G
Sbjct: 114 LMIGGPDMAFPRLNNISFWLLPPSLLLLVFSAIIEGGVGTGWTLLKDKYPPLSGLQSHSG 173
Query: 425 RSVDLAIFSLHLAGISSIIGAINF 496
SVDLAIF+LHL+G+SS++G+INF
Sbjct: 174 PSVDLAIFALHLSGVSSLLGSINF 197
Score = 49.6 bits (113), Expect = 8e-05
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = +3
Query: 660 FDPAGGGDPILYPHLFWFFGHP 725
F+ AGGGDPIL+ HLFWFFGHP
Sbjct: 246 FEVAGGGDPILFQHLFWFFGHP 267
Score = 36.3 bits (80), Expect = 0.77
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +3
Query: 42 RDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHA 191
+DIGTLY EL PG I ++Q+YN+I+TAHA
Sbjct: 41 KDIGTLYLIFALFSGLLGTAFSVLIRLELSGPGVQFIANNQLYNSIITAHA 91
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 86.2 bits (204), Expect = 7e-16
Identities = 44/80 (55%), Positives = 54/80 (67%)
Frame = +2
Query: 257 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 436
L+LGA D+AF R+NNI F +VE GAGTG TVY PL+ +H G +VD
Sbjct: 91 LMLGASDMAFARLNNISFWLLVPSLILILTSALVEAGAGTGWTVYFPLAGIQSHSGPAVD 150
Query: 437 LAIFSLHLAGISSIIGAINF 496
LAIFSLHL+G SS++GAINF
Sbjct: 151 LAIFSLHLSGFSSLLGAINF 170
Score = 37.1 bits (82), Expect = 0.44
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +3
Query: 660 FDPAGGGDPILYPHLFWFFGHP 725
F+ AGGGD +LY HLF+++ HP
Sbjct: 226 FEYAGGGDAVLYQHLFYWWNHP 247
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 82.6 bits (195), Expect = 9e-15
Identities = 38/79 (48%), Positives = 53/79 (67%)
Frame = +2
Query: 257 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 436
L +G+ D AFPRINN+ F +++ G G+G T+YPPL+S +H G S+D
Sbjct: 103 LQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSID 162
Query: 437 LAIFSLHLAGISSIIGAIN 493
+AIF+LHL+G+SSI GAIN
Sbjct: 163 MAIFALHLSGLSSIFGAIN 181
Score = 46.4 bits (105), Expect = 7e-04
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3
Query: 660 FDPAGGGDPILYPHLFWFFGHP 725
F +GGGDP+LY H+FWFFGHP
Sbjct: 238 FVVSGGGDPLLYEHIFWFFGHP 259
Score = 37.1 bits (82), Expect = 0.44
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +1
Query: 541 QLPLFG*AVGITAFXXXXXXXXXAGAITILLTDRNLNTS-FLIRLEEETQFYIHIYFGF 714
+LPLF +V ITA A +T+LL DRN NTS F++ + Y HI++ F
Sbjct: 198 KLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFF 256
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 82.6 bits (195), Expect = 9e-15
Identities = 38/79 (48%), Positives = 53/79 (67%)
Frame = +2
Query: 257 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 436
L +G+ D AFPRINN+ F +++ G G+G T+YPPL+S +H G S+D
Sbjct: 103 LQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSID 162
Query: 437 LAIFSLHLAGISSIIGAIN 493
+AIF+LHL+G+SSI GAIN
Sbjct: 163 MAIFALHLSGLSSIFGAIN 181
Score = 46.4 bits (105), Expect = 7e-04
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3
Query: 660 FDPAGGGDPILYPHLFWFFGHP 725
F +GGGDP+LY H+FWFFGHP
Sbjct: 238 FVVSGGGDPLLYEHIFWFFGHP 259
Score = 37.1 bits (82), Expect = 0.44
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +1
Query: 541 QLPLFG*AVGITAFXXXXXXXXXAGAITILLTDRNLNTS-FLIRLEEETQFYIHIYFGF 714
+LPLF +V ITA A +T+LL DRN NTS F++ + Y HI++ F
Sbjct: 198 KLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFF 256
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 82.6 bits (195), Expect = 9e-15
Identities = 38/79 (48%), Positives = 53/79 (67%)
Frame = +2
Query: 257 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 436
L +G+ D AFPRINN+ F +++ G G+G T+YPPL+S +H G S+D
Sbjct: 103 LQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSID 162
Query: 437 LAIFSLHLAGISSIIGAIN 493
+AIF+LHL+G+SSI GAIN
Sbjct: 163 MAIFALHLSGLSSIFGAIN 181
Score = 40.3 bits (90), Expect = 0.047
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +3
Query: 660 FDPAGGGDPILYPHLFWFFG 719
F +GGGDP+LY H+FWFFG
Sbjct: 238 FVVSGGGDPLLYEHIFWFFG 257
Score = 37.1 bits (82), Expect = 0.44
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +1
Query: 541 QLPLFG*AVGITAFXXXXXXXXXAGAITILLTDRNLNTS-FLIRLEEETQFYIHIYFGF 714
+LPLF +V ITA A +T+LL DRN NTS F++ + Y HI++ F
Sbjct: 198 KLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFF 256
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 82.6 bits (195), Expect = 9e-15
Identities = 38/79 (48%), Positives = 53/79 (67%)
Frame = +2
Query: 257 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 436
L +G+ D AFPRINN+ F +++ G G+G T+YPPL+S +H G S+D
Sbjct: 103 LQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSID 162
Query: 437 LAIFSLHLAGISSIIGAIN 493
+AIF+LHL+G+SSI GAIN
Sbjct: 163 MAIFALHLSGLSSIFGAIN 181
Score = 36.7 bits (81), Expect = 0.58
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +1
Query: 541 QLPLFG*AVGITAFXXXXXXXXXAGAITILLTDRNLNTS-FLIRLEEETQFYIHIYF 708
+LPLF +V ITA A +T+LL DRN NTS F++ + Y HI++
Sbjct: 198 KLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFY 254
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 81.0 bits (191), Expect = 3e-14
Identities = 35/80 (43%), Positives = 53/80 (66%)
Frame = +2
Query: 257 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 436
L++GAPD+AFPR+NN+ + +++ GAG G T YPP+S+ R+VD
Sbjct: 191 LMIGAPDMAFPRLNNLSYWMYVAGTCLAFCSVMIDGGAGPGWTFYPPISAQGVETSRAVD 250
Query: 437 LAIFSLHLAGISSIIGAINF 496
AIF++H++G SSI+G+INF
Sbjct: 251 FAIFAVHVSGASSILGSINF 270
Score = 54.0 bits (124), Expect = 4e-06
Identities = 19/22 (86%), Positives = 21/22 (95%)
Frame = +3
Query: 660 FDPAGGGDPILYPHLFWFFGHP 725
FDPAGGGDPIL+ H+FWFFGHP
Sbjct: 326 FDPAGGGDPILFQHIFWFFGHP 347
Score = 39.1 bits (87), Expect = 0.11
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = +1
Query: 541 QLPLFG*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 660
++PLF +V +TA+ AGAIT+LLTDRN T+F
Sbjct: 286 KVPLFAWSVFVTAWLLLLSLPVLAGAITMLLTDRNFGTTF 325
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 80.2 bits (189), Expect = 5e-14
Identities = 39/65 (60%), Positives = 45/65 (69%)
Frame = +2
Query: 257 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 436
L+LGAPD+AFPR+NN+ F +VENGAGTG TVYPPLSS AH G SVD
Sbjct: 1 LMLGAPDMAFPRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAGASVD 60
Query: 437 LAIFS 451
LAI+S
Sbjct: 61 LAIYS 65
Score = 42.7 bits (96), Expect = 0.009
Identities = 23/49 (46%), Positives = 25/49 (51%)
Frame = +3
Query: 540 SITLIWMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIFDPAGGGDP 686
SIT I M C +Y TCFS S+Y IIN K KY IF P P
Sbjct: 92 SITFICMICCNYCYFITSFFTCFSSSHYYIINWPKSKYFIFWPNWSSSP 140
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 78.6 bits (185), Expect = 1e-13
Identities = 43/84 (51%), Positives = 54/84 (64%), Gaps = 4/84 (4%)
Frame = +2
Query: 257 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVE----NGAGTG*TVYPPLSSNIAHRG 424
+++GAPD+AFPR+NNI F V NGAGTG TVY PLS++ G
Sbjct: 125 IMIGAPDMAFPRMNNISFWLLIPAFALLLGSTFVPGGTGNGAGTGWTVYAPLSTS-GSAG 183
Query: 425 RSVDLAIFSLHLAGISSIIGAINF 496
+VD+AI SLH+AG SSI+GAINF
Sbjct: 184 PAVDMAILSLHIAGASSILGAINF 207
Score = 49.2 bits (112), Expect = 1e-04
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = +3
Query: 660 FDPAGGGDPILYPHLFWFFGHP 725
+D AGGGDP LY HLFWFFGHP
Sbjct: 263 YDAAGGGDPELYQHLFWFFGHP 284
Score = 38.7 bits (86), Expect = 0.14
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +1
Query: 541 QLPLFG*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFLIRL-EEETQFYIHIYFGF 714
++PLF +V +TAF A AIT+LLTDRN T+F + + Y H+++ F
Sbjct: 223 KMPLFVWSVLVTAFLLLLALPVLAAAITMLLTDRNFGTTFYDAAGGGDPELYQHLFWFF 281
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 70.9 bits (166), Expect = 3e-11
Identities = 37/80 (46%), Positives = 47/80 (58%)
Frame = +2
Query: 257 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 436
L +GAP +A PR+ N+ F + G G VYPP SS +AH +VD
Sbjct: 75 LXVGAPXMAXPRLXNMSFWLLPPSLXXLCLSVFIGXGVGXXWXVYPPXSSGLAHSSGAVD 134
Query: 437 LAIFSLHLAGISSIIGAINF 496
L IF LHLAGISS +G++NF
Sbjct: 135 LGIFXLHLAGISSXLGSMNF 154
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 67.3 bits (157), Expect = 4e-10
Identities = 32/48 (66%), Positives = 37/48 (77%)
Frame = +2
Query: 353 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAINF 496
+VE G G G TVYPPL+S + H G SVD AIFSLHLAG SSI+GA+ F
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASSIMGAMYF 59
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 66.9 bits (156), Expect = 5e-10
Identities = 32/80 (40%), Positives = 47/80 (58%)
Frame = +2
Query: 257 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 436
L++ D++ PR+NN+ + G G G T+YPPLS++ G +D
Sbjct: 87 LMIKIKDLSMPRLNNLSVWLALGSLFLMCMAFLSSGGLGCGWTMYPPLSNSEFMDGLPID 146
Query: 437 LAIFSLHLAGISSIIGAINF 496
LA+FSLH+AG+SSI G+INF
Sbjct: 147 LAVFSLHMAGMSSIAGSINF 166
Score = 47.6 bits (108), Expect = 3e-04
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +3
Query: 666 PAGGGDPILYPHLFWFFGHP 725
P GGGDPIL+ HLFWFFGHP
Sbjct: 225 PEGGGDPILWQHLFWFFGHP 244
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 61.3 bits (142), Expect = 2e-08
Identities = 32/80 (40%), Positives = 42/80 (52%)
Frame = +2
Query: 257 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 436
L+LGAP++AFPR+N + F + G G+ T YPPLS S+D
Sbjct: 96 LMLGAPEMAFPRVNALSFWFTFVALLMVYQSFFIGGGPGSSWTFYPPLSVE-GQPELSLD 154
Query: 437 LAIFSLHLAGISSIIGAINF 496
I LH GI S++GAINF
Sbjct: 155 TMILGLHTVGIGSLLGAINF 174
Score = 44.0 bits (99), Expect = 0.004
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = +3
Query: 660 FDPAGGGDPILYPHLFWFFGHP 725
+D GG+P+LY HLFWFFGHP
Sbjct: 230 YDTKKGGNPLLYQHLFWFFGHP 251
Score = 32.7 bits (71), Expect = 9.5
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +1
Query: 538 DQLPLFG*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFL-IRLEEETQFYIHIYFGF 714
DQ+ +F +T+F AG++ LL DRN NTSF + Y H+++ F
Sbjct: 189 DQISMFVWTSYLTSFLLVLSVPVLAGSLLFLLLDRNFNTSFYDTKKGGNPLLYQHLFWFF 248
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 60.9 bits (141), Expect = 3e-08
Identities = 29/79 (36%), Positives = 42/79 (53%)
Frame = +2
Query: 257 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 436
++ G PD+ FPR+NN+ F + E G G G T+YP L H + D
Sbjct: 88 VMAGFPDMVFPRLNNMSFWMYLAGFGCVVNGFLTEEGMGVGWTLYPTLICIDFHSSLACD 147
Query: 437 LAIFSLHLAGISSIIGAIN 493
+F++HL GISSI+ +IN
Sbjct: 148 FVMFAVHLLGISSILNSIN 166
Score = 43.6 bits (98), Expect = 0.005
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = +3
Query: 660 FDPAGGGDPILYPHLFWFFGHP 725
+D GGGD IL+ H+FWFFGHP
Sbjct: 223 YDVVGGGDLILFQHIFWFFGHP 244
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 60.5 bits (140), Expect = 4e-08
Identities = 36/89 (40%), Positives = 47/89 (52%)
Frame = +2
Query: 230 WRIWKLISSLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSN 409
W IWKLI+S + P FP + N + PL+S+
Sbjct: 28 WWIWKLINSANVSGPWYGFPANKQYKILTSAPLTYTPINK---RNSS--------PLASS 76
Query: 410 IAHRGRSVDLAIFSLHLAGISSIIGAINF 496
IAH G SVD+AIFSLHLAG+SSI+G++NF
Sbjct: 77 IAHAGASVDMAIFSLHLAGVSSILGSVNF 105
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 60.5 bits (140), Expect = 4e-08
Identities = 29/81 (35%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Frame = +2
Query: 257 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR-SV 433
++ G+P++A+PRIN+I E G GTG T+YPPLS+++ +V
Sbjct: 90 ILCGSPELAYPRINSISLLLQPIAFVLVILSTAAEFGGGTGWTLYPPLSTSLMSLSPVAV 149
Query: 434 DLAIFSLHLAGISSIIGAINF 496
D+ IF L ++G++SI+ ++NF
Sbjct: 150 DVIIFGLLVSGVASIMSSLNF 170
Score = 49.6 bits (113), Expect = 8e-05
Identities = 18/24 (75%), Positives = 19/24 (79%)
Frame = +3
Query: 654 IIFDPAGGGDPILYPHLFWFFGHP 725
+ FDP GDPILY HLFWFFGHP
Sbjct: 224 LFFDPTFAGDPILYQHLFWFFGHP 247
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 56.0 bits (129), Expect = 9e-07
Identities = 28/80 (35%), Positives = 46/80 (57%)
Frame = +2
Query: 257 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 436
++LG D+ +PR+N +E G+GTG T+YPPLS+++++ G +D
Sbjct: 93 VLLGYCDVVYPRVNLYSLLFQPIGFVLVVSSIYLEIGSGTGWTLYPPLSTSLSNVG--ID 150
Query: 437 LAIFSLHLAGISSIIGAINF 496
IF L AGI+S + ++NF
Sbjct: 151 FIIFGLLAAGIASTLSSVNF 170
Score = 45.6 bits (103), Expect = 0.001
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +3
Query: 654 IIFDPAGGGDPILYPHLFWFFGHP 725
+ F+ + GDP+LY HLFWFFGHP
Sbjct: 224 MFFESSNSGDPVLYQHLFWFFGHP 247
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 55.6 bits (128), Expect = 1e-06
Identities = 33/77 (42%), Positives = 42/77 (54%)
Frame = +2
Query: 257 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 436
L+LGAPD+AFPR+NN+ F + G + PL G SVD
Sbjct: 69 LMLGAPDMAFPRMNNMSFGFFPLHWHYYSFFTV--KGGLARDELSTPLYLVTISAGPSVD 126
Query: 437 LAIFSLHLAGISSIIGA 487
LAIF LHLAG+SSI+G+
Sbjct: 127 LAIFPLHLAGVSSILGS 143
Score = 41.9 bits (94), Expect = 0.016
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3
Query: 123 ELGNPGSLIGDDQIYNTIVTAH 188
ELG PGSL+ DDQ+YN +VTAH
Sbjct: 24 ELGQPGSLLNDDQLYNVVVTAH 45
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 55.2 bits (127), Expect = 2e-06
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = +2
Query: 245 LISSLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPPLSSNIAHR 421
L+ L++GA D+AFPR+N F G AG G T Y PLS+N+
Sbjct: 113 LLIPLMIGARDMAFPRLNMYSFWTFLLSQLLVLASFFAPLGSAGAGWTTYTPLSTNVGMP 172
Query: 422 GRSVDLAIFSLHLAGISSIIGAINF 496
G L + ++ + G+SS +GA+N+
Sbjct: 173 GMGQTLVVAAIFVTGVSSTMGAVNY 197
Score = 42.7 bits (96), Expect = 0.009
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +3
Query: 672 GGGDPILYPHLFWFFGHP 725
GGGDPIL+ HLFW FGHP
Sbjct: 262 GGGDPILWQHLFWIFGHP 279
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 53.2 bits (122), Expect = 6e-06
Identities = 25/49 (51%), Positives = 31/49 (63%)
Frame = +2
Query: 257 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 403
L++GAPD+AFPR+NN+ F VE GAGTG TVYPPL+
Sbjct: 86 LMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLA 134
Score = 43.2 bits (97), Expect = 0.007
Identities = 23/50 (46%), Positives = 26/50 (52%)
Frame = +3
Query: 42 RDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHA 191
+D GTL AELG PG+L+GDDQ N IVTAHA
Sbjct: 14 KDXGTLXXIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQXXNVIVTAHA 63
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 52.0 bits (119), Expect = 1e-05
Identities = 18/22 (81%), Positives = 21/22 (95%)
Frame = +3
Query: 660 FDPAGGGDPILYPHLFWFFGHP 725
F+P+GGGDPIL+ HLFWFFGHP
Sbjct: 310 FEPSGGGDPILFQHLFWFFGHP 331
Score = 50.8 bits (116), Expect = 3e-05
Identities = 30/80 (37%), Positives = 41/80 (51%)
Frame = +2
Query: 257 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 436
+ L D+ PR+N++ G G G T+YPPLS G VD
Sbjct: 183 IFLCLDDLLLPRLNSLSLWLMVPSIFYMELSLYY--GCGIGWTLYPPLSI-WEGSGFGVD 239
Query: 437 LAIFSLHLAGISSIIGAINF 496
+FSLHLAG+SS+IG++NF
Sbjct: 240 YLMFSLHLAGVSSLIGSVNF 259
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 50.8 bits (116), Expect = 3e-05
Identities = 22/43 (51%), Positives = 25/43 (58%)
Frame = +3
Query: 597 TTCFSWSYYNIINRSKLKYIIFDPAGGGDPILYPHLFWFFGHP 725
++ SW N S FDPAGGGD IL+ HLF FFGHP
Sbjct: 176 SSSISWGNNNASYSSNYYTTFFDPAGGGDXILFQHLFXFFGHP 218
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 50.8 bits (116), Expect = 3e-05
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = +2
Query: 248 ISSLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGA-GTG*TVYPPLSSNIAHRG 424
I L +GA D+AFPR+N + + E+GA G T+Y PL++ I G
Sbjct: 90 IVPLQIGARDLAFPRLNALSYWLYLLSGLVLLASFFTESGAPNVGWTLYAPLTARIYTPG 149
Query: 425 RSVDLAIFSLHLAGISSIIGAINF 496
+DLA ++ L +S +G INF
Sbjct: 150 IGLDLAALAIFLFSLSVTLGTINF 173
Score = 37.1 bits (82), Expect = 0.44
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +3
Query: 627 IINRSKLKYIIFDPAGGGDPILYPHLFWFFGHP 725
+++R+ +PAGG +L+ HLFWFFGHP
Sbjct: 219 LLDRNLGTEFFLNPAGGA--LLWDHLFWFFGHP 249
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 50.4 bits (115), Expect = 4e-05
Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Frame = +2
Query: 257 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV-ENGAGTG*TVYPPLSSNIAHR-GRS 430
+++G +++ PR+N I F ++ +G T+YPPLS+ A G +
Sbjct: 95 MLIGTSELSMPRMNGISFWMLIVGVVIFVISNVLMSKPISSGWTLYPPLSTRDADNIGVN 154
Query: 431 VDLAIFSLHLAGISSIIGAINF 496
+DL++ +H+ GISS IG++N+
Sbjct: 155 IDLSLLVVHVLGISSTIGSVNY 176
Score = 41.9 bits (94), Expect = 0.016
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +3
Query: 678 GDPILYPHLFWFFGHP 725
GDP+LY HLFWFFGHP
Sbjct: 236 GDPVLYQHLFWFFGHP 251
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 50.4 bits (115), Expect = 4e-05
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Frame = +2
Query: 257 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVEN--GAGTG*TVYPPLSSNIAHRGRS 430
L++ A D+AFPRIN I F ++ A T T+Y PLS ++ +
Sbjct: 140 LLIDADDMAFPRINAIAFWLLPPGAILIWSGFLIPGIATAQTSWTMYTPLSLQMS--SPA 197
Query: 431 VDLAIFSLHLAGISSIIGAINF 496
VD+ + LHL G+S+ +GAINF
Sbjct: 198 VDMMMLGLHLTGVSATMGAINF 219
Score = 41.9 bits (94), Expect = 0.016
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = +3
Query: 660 FDPAGGGDPILYPHLFWFFGHP 725
F GGDPI + HLFWFFGHP
Sbjct: 274 FFTVAGGDPIFWQHLFWFFGHP 295
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 50.4 bits (115), Expect = 4e-05
Identities = 30/89 (33%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
Frame = +2
Query: 230 WRIWKLISSLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT-G*TVYPPLSS 406
W + L +GAPD+AFPR+N F + GA G T+Y PLS
Sbjct: 101 WGFANYVLPLQIGAPDVAFPRLNAFGFWITTVGGVAMLTGFLTPGGAADFGWTMYSPLSD 160
Query: 407 NIAHRGRSVDLAIFSLHLAGISSIIGAIN 493
I G D+ I + GI S+ AIN
Sbjct: 161 AIHSPGLGSDMWIVGVGATGIGSVASAIN 189
Score = 41.5 bits (93), Expect = 0.021
Identities = 17/28 (60%), Positives = 21/28 (75%)
Frame = +3
Query: 642 KLKYIIFDPAGGGDPILYPHLFWFFGHP 725
KL ++DPA GG +L+ HLFWFFGHP
Sbjct: 240 KLGGHLYDPANGGS-LLWQHLFWFFGHP 266
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 49.6 bits (113), Expect = 8e-05
Identities = 30/75 (40%), Positives = 42/75 (56%)
Frame = +2
Query: 272 PDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFS 451
PD+ FPR+N + F ++ + A G T YPPLSS SV+ ++FS
Sbjct: 85 PDLLFPRMNALSFWLMPFSLSL-----LLFSMASAGWTFYPPLSS----LSPSVEFSVFS 135
Query: 452 LHLAGISSIIGAINF 496
LHLAGI+S+I + NF
Sbjct: 136 LHLAGIASLISSCNF 150
Score = 46.8 bits (106), Expect = 5e-04
Identities = 18/33 (54%), Positives = 21/33 (63%)
Frame = +3
Query: 627 IINRSKLKYIIFDPAGGGDPILYPHLFWFFGHP 725
I+ L +D GGDP+LY HLFWFFGHP
Sbjct: 193 ILTDKHLGTCFYDATMGGDPLLYQHLFWFFGHP 225
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 49.6 bits (113), Expect = 8e-05
Identities = 37/88 (42%), Positives = 48/88 (54%), Gaps = 8/88 (9%)
Frame = +2
Query: 257 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXX--IVEN-GAGTG*TVYPPLS-----SNI 412
L++GA D+AFPRIN I F I E A TG T+Y PLS N
Sbjct: 166 LLIGADDMAFPRINAIAFWLLPPAALLIWAGFFPIPEVIPAQTGWTMYTPLSVGEGMGNQ 225
Query: 413 AHRGRSVDLAIFSLHLAGISSIIGAINF 496
A+ G VDL + LHL+G+S+ +G+INF
Sbjct: 226 ANAG--VDLMLLGLHLSGVSATMGSINF 251
Score = 37.5 bits (83), Expect = 0.33
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = +3
Query: 669 AGGGDPILYPHLFWFFGHP 725
AG G IL+ HLFWFFGHP
Sbjct: 308 AGEGGAILWQHLFWFFGHP 326
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 49.2 bits (112), Expect = 1e-04
Identities = 29/87 (33%), Positives = 42/87 (48%)
Frame = +2
Query: 236 IWKLISSLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIA 415
I +I L +G+ D+AFP +N + F I+ A TG YPPLS
Sbjct: 117 IMNIIIPLQIGSKDVAFPSLNLLSFWLTFFSVLLINISLIIGEFAKTGWLGYPPLSEKTF 176
Query: 416 HRGRSVDLAIFSLHLAGISSIIGAINF 496
VD +S+ ++GI +II +INF
Sbjct: 177 SPWVGVDYWNWSIQISGIGTIISSINF 203
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 48.8 bits (111), Expect = 1e-04
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Frame = +2
Query: 245 LISSLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPPLS--SNIA 415
L+ ++GAPD+AFP++N F G A +G YPP+S + +
Sbjct: 104 LLIPTMIGAPDMAFPKLNAAAFWLVPVFSIVLMGSFFAPGGPASSGWWSYPPMSLQNPLG 163
Query: 416 HRGRSVDLAIFSLHLAGISSIIGAINF 496
H L I ++ L+GISSI+GAINF
Sbjct: 164 HFINGEFLWILAVALSGISSIMGAINF 190
Score = 44.0 bits (99), Expect = 0.004
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +3
Query: 660 FDPAGGGDPILYPHLFWFFGHP 725
F P GGGDP+L+ H FWF+ HP
Sbjct: 246 FRPEGGGDPVLFQHFFWFYSHP 267
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 48.8 bits (111), Expect = 1e-04
Identities = 21/38 (55%), Positives = 25/38 (65%)
Frame = +3
Query: 558 MSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIFDPA 671
M C +YS +TC WSYYN IN SKLKYI+F P+
Sbjct: 84 MICSNYSFTIIIVSTCSCWSYYNTINWSKLKYILFWPS 121
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 48.8 bits (111), Expect = 1e-04
Identities = 25/84 (29%), Positives = 40/84 (47%)
Frame = +2
Query: 245 LISSLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRG 424
++ L +GA D+AFP +NN+ F ++ G T Y PL+SN G
Sbjct: 121 VVVPLQIGARDVAFPYLNNLSFWTFFVGAMLFNISFVIGGSPNAGWTSYMPLASNDMSPG 180
Query: 425 RSVDLAIFSLHLAGISSIIGAINF 496
+ + L +AGI +++ INF
Sbjct: 181 PGENYYLLGLQIAGIGTLMTGINF 204
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 48.0 bits (109), Expect = 2e-04
Identities = 28/87 (32%), Positives = 43/87 (49%)
Frame = +2
Query: 236 IWKLISSLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIA 415
+ ++ L +GA D+AFP +N++ F V N A TG YPPL+
Sbjct: 123 LMNIVVPLQIGARDVAFPFLNSLSFWLLVSAVILVNLSLGVGNFARTGWVAYPPLAELGF 182
Query: 416 HRGRSVDLAIFSLHLAGISSIIGAINF 496
VD I++L ++GI + + AINF
Sbjct: 183 SPDVGVDYYIWALQISGIGTTLTAINF 209
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 48.0 bits (109), Expect = 2e-04
Identities = 16/23 (69%), Positives = 20/23 (86%)
Frame = +3
Query: 657 IFDPAGGGDPILYPHLFWFFGHP 725
+FDPA GGDP+L+ HLFWF+ HP
Sbjct: 245 MFDPARGGDPVLFQHLFWFYSHP 267
Score = 44.0 bits (99), Expect = 0.004
Identities = 28/80 (35%), Positives = 38/80 (47%)
Frame = +2
Query: 257 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 436
L+LGA D+AFPR+N + ++ G TG T Y P S AH +V
Sbjct: 115 LMLGAKDVAFPRLNLLSL-YIYLAGAVLALWGMLNGGLDTGWTFYTPYS---AHTTTTVA 170
Query: 437 LAIFSLHLAGISSIIGAINF 496
+F + G SSI+ INF
Sbjct: 171 PVLFGAFIIGFSSIVTGINF 190
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 47.6 bits (108), Expect = 3e-04
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = +3
Query: 657 IFDPAGGGDPILYPHLFWFFGHP 725
IFDPA GGDP+L+ H FWF+ HP
Sbjct: 238 IFDPARGGDPVLFQHFFWFYSHP 260
Score = 41.5 bits (93), Expect = 0.021
Identities = 27/80 (33%), Positives = 40/80 (50%)
Frame = +2
Query: 257 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 436
+++GA D+AFP++N + F +V+ GA TG T Y P S+ + V
Sbjct: 108 IMIGAKDVAFPKLNLLSF-YVYLAGAVVALFGMVQGGADTGWTFYTPYSTTTITKVVPVL 166
Query: 437 LAIFSLHLAGISSIIGAINF 496
L F L G SSI+ +NF
Sbjct: 167 LGAFIL---GFSSILTGLNF 183
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 47.6 bits (108), Expect = 3e-04
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = +3
Query: 660 FDPAGGGDPILYPHLFWFFGHP 725
F+P GGGDP++Y HLFWF+ HP
Sbjct: 231 FNPVGGGDPVVYQHLFWFYSHP 252
Score = 47.2 bits (107), Expect = 4e-04
Identities = 32/80 (40%), Positives = 39/80 (48%)
Frame = +2
Query: 257 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 436
L++G D+AFPR+N + F V G T YPPLS G +
Sbjct: 99 LMVGTEDMAFPRLNAVAFWLTPPGGILLISSFFV-GAPQAGWTSYPPLSLLSGKWGE--E 155
Query: 437 LAIFSLHLAGISSIIGAINF 496
L I SL L G SSI+GAINF
Sbjct: 156 LWILSLLLVGTSSILGAINF 175
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 47.2 bits (107), Expect = 4e-04
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +2
Query: 260 ILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV-ENGAGTG*TVYPPLSSNIAHRGRSVD 436
++GAPD+ +PRIN + F + ++G G T+YPPLS+ + VD
Sbjct: 92 LIGAPDMYWPRINALSFWMQVPATVFMWSSLLFWQHGDSIGWTLYPPLST--ISKSIGVD 149
Query: 437 LAIFSLHLAGISSIIGAINF 496
L + + +AG SS + INF
Sbjct: 150 LILLGIIIAGFSSTLTGINF 169
Score = 44.0 bits (99), Expect = 0.004
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +3
Query: 663 DPAGGGDPILYPHLFWFFGHP 725
DPA GDP L+ H+FWFFGHP
Sbjct: 231 DPAASGDPRLFQHIFWFFGHP 251
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 46.8 bits (106), Expect = 5e-04
Identities = 27/79 (34%), Positives = 37/79 (46%)
Frame = +2
Query: 257 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 436
L++GA D+AFPR+N+ F + + G Y PLSS + VD
Sbjct: 104 LMIGARDVAFPRLNSFGFWMFFFGAALLHFSFLTGSAPNAGWFSYVPLSSKAYSSLQGVD 163
Query: 437 LAIFSLHLAGISSIIGAIN 493
I L + GI S+ GAIN
Sbjct: 164 YWIIGLLIMGIGSVSGAIN 182
Score = 39.1 bits (87), Expect = 0.11
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +3
Query: 660 FDPAGGGDPILYPHLFWFFGHP 725
FDP GG +L+ H FW FGHP
Sbjct: 239 FDPTRGGSAVLWQHYFWIFGHP 260
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 46.4 bits (105), Expect = 7e-04
Identities = 29/80 (36%), Positives = 39/80 (48%)
Frame = +2
Query: 257 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 436
L++GA D+AFPR+N + + I N T T YPP S N +
Sbjct: 43 LMIGAKDVAFPRLNALSWWAFFAANVLFLMTLIPGNHIMTMWTGYPPFSLN--NDAGVTA 100
Query: 437 LAIFSLHLAGISSIIGAINF 496
L +F +HL G SSI A+NF
Sbjct: 101 LYVFVMHLLGASSIATAVNF 120
Score = 42.3 bits (95), Expect = 0.012
Identities = 13/22 (59%), Positives = 19/22 (86%)
Frame = +3
Query: 660 FDPAGGGDPILYPHLFWFFGHP 725
F+PA GGDP++Y ++FWF+ HP
Sbjct: 176 FNPAKGGDPLIYQNIFWFYSHP 197
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 46.0 bits (104), Expect = 0.001
Identities = 16/22 (72%), Positives = 18/22 (81%)
Frame = +3
Query: 660 FDPAGGGDPILYPHLFWFFGHP 725
FDP GGDP+L+ HLFW FGHP
Sbjct: 262 FDPERGGDPLLWQHLFWIFGHP 283
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 46.0 bits (104), Expect = 0.001
Identities = 27/87 (31%), Positives = 41/87 (47%)
Frame = +2
Query: 236 IWKLISSLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIA 415
+ L L +GA D+AFP +N++ F V A TG YPPL+
Sbjct: 122 LMNLAVPLQIGARDVAFPFLNSLSFYLLLAGVLLVNISLGVGEFAKTGWVAYPPLAGIQY 181
Query: 416 HRGRSVDLAIFSLHLAGISSIIGAINF 496
G VD I++L L+G+ + + +NF
Sbjct: 182 SPGVGVDYYIWALQLSGLGTTLTGVNF 208
Score = 34.3 bits (75), Expect = 3.1
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +3
Query: 645 LKYIIFDPAGGGDPILYPHLFWFFGHP 725
L + IF GG+P++Y +LFW +GHP
Sbjct: 259 LDFHIFTNELGGNPMMYVNLFWAWGHP 285
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 45.6 bits (103), Expect = 0.001
Identities = 24/52 (46%), Positives = 29/52 (55%)
Frame = +2
Query: 257 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNI 412
+++GAPD+AFPR+NNI F VE GAGTG TV LS I
Sbjct: 85 VMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVKCKLSQII 136
Score = 35.9 bits (79), Expect = 1.0
Identities = 21/52 (40%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = +3
Query: 42 RDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHA 191
+DIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 11 KDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHA 62
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 44.8 bits (101), Expect = 0.002
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3
Query: 660 FDPAGGGDPILYPHLFWFFGHP 725
F+PA GGD +L+ HLFWFFGHP
Sbjct: 236 FNPAEGGDVLLWQHLFWFFGHP 257
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 43.6 bits (98), Expect = 0.005
Identities = 25/80 (31%), Positives = 35/80 (43%)
Frame = +2
Query: 257 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 436
L++GA D+AFPR+N + V G Y PL+ VD
Sbjct: 103 LMIGARDMAFPRLNALSIWLFIFGGLMLYVSFFVGGAPNVGWFAYAPLTQKQFAPTAGVD 162
Query: 437 LAIFSLHLAGISSIIGAINF 496
I + L G++SI GA+NF
Sbjct: 163 YWIVGIGLTGVASIAGALNF 182
Score = 40.3 bits (90), Expect = 0.047
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = +3
Query: 660 FDPAGGGDPILYPHLFWFFGHP 725
F P GGD +L+ HLFWFFGHP
Sbjct: 238 FLPNLGGDAVLWQHLFWFFGHP 259
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 43.6 bits (98), Expect = 0.005
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = +3
Query: 660 FDPAGGGDPILYPHLFWFFGHP 725
F+ A GGDPIL HLFWFFGHP
Sbjct: 381 FEYAYGGDPILSQHLFWFFGHP 402
>UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1;
Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit
I - Pachymerium ferrugineum
Length = 219
Score = 43.2 bits (97), Expect = 0.007
Identities = 25/63 (39%), Positives = 30/63 (47%)
Frame = +1
Query: 268 STRYSIPTNK*YKILTPTPLPYIINFKKNCRKWCRNRMNSLPPTFI*YRT*RKIRRSCYF 447
ST + P NK +KIL TPL Y N C K C + +NSLP Y T R +F
Sbjct: 73 STSHGFPPNKQFKILIITPLTYTTNSIYGCSKRCSHSVNSLPAPCCKYLTLGPFRSYNHF 132
Query: 448 FTT 456
T
Sbjct: 133 CPT 135
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 42.7 bits (96), Expect = 0.009
Identities = 16/22 (72%), Positives = 17/22 (77%)
Frame = +3
Query: 660 FDPAGGGDPILYPHLFWFFGHP 725
F A GDPIL+ HLFWFFGHP
Sbjct: 242 FFTAASGDPILWQHLFWFFGHP 263
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 42.7 bits (96), Expect = 0.009
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Frame = +2
Query: 257 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVE-NGAGTG*TVYPPLS---SNIAHRG 424
L++GA D+AFP +N + + + +GA G T YPPLS ++ G
Sbjct: 119 LMIGADDMAFPTLNMLSYWFMWPAFFFFGGAFFCDGHGAAAGWTSYPPLSDMTTSAPSSG 178
Query: 425 RSVDLAIFSLHLAGISSIIGAINF 496
+ L + + G+SS++G++N+
Sbjct: 179 AAQTLWLLGVTTVGVSSMLGSVNY 202
Score = 39.9 bits (89), Expect = 0.063
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +3
Query: 669 AGGGDPILYPHLFWFFGHP 725
AGGG P+L+ HLFWF+ HP
Sbjct: 272 AGGGQPLLWQHLFWFYSHP 290
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 42.3 bits (95), Expect = 0.012
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = +3
Query: 660 FDPAGGGDPILYPHLFWFFGHP 725
F GGDP+L+ HLFWFFGHP
Sbjct: 246 FTAERGGDPLLWQHLFWFFGHP 267
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 42.3 bits (95), Expect = 0.012
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +3
Query: 672 GGGDPILYPHLFWFFGHP 725
GGG P+L+ HLFWFFGHP
Sbjct: 264 GGGSPLLFQHLFWFFGHP 281
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 41.9 bits (94), Expect = 0.016
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +3
Query: 675 GGDPILYPHLFWFFGHP 725
GGDP+L+ HLFWFFGHP
Sbjct: 310 GGDPLLWQHLFWFFGHP 326
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 41.9 bits (94), Expect = 0.016
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = +3
Query: 660 FDPAGGGDPILYPHLFWFFGHP 725
FD GGDP+L+ HLFW FGHP
Sbjct: 262 FDHTLGGDPLLWQHLFWLFGHP 283
Score = 36.3 bits (80), Expect = 0.77
Identities = 20/78 (25%), Positives = 35/78 (44%)
Frame = +2
Query: 257 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 436
L++GA D+ FPR+ + + + G +Y PLS++ G S D
Sbjct: 127 LMIGARDLVFPRLGAFGYYCYLFGGIIVLSSFLFDAAPDGGWFMYVPLSTSAYTEGLSAD 186
Query: 437 LAIFSLHLAGISSIIGAI 490
+ + LA I+S+ A+
Sbjct: 187 FWLIGITLAEIASVTAAV 204
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 41.9 bits (94), Expect = 0.016
Identities = 16/22 (72%), Positives = 17/22 (77%)
Frame = +3
Query: 660 FDPAGGGDPILYPHLFWFFGHP 725
F+PA GGDPI Y HLFWF HP
Sbjct: 222 FNPAVGGDPIAYAHLFWFTFHP 243
Score = 34.7 bits (76), Expect = 2.4
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +2
Query: 392 PPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAINF 496
PP S I+ G + D+ IF L + GISSI+G+INF
Sbjct: 133 PPYSV-ISAPGPAADMWIFGLKILGISSILGSINF 166
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 41.1 bits (92), Expect = 0.027
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = +3
Query: 660 FDPAGGGDPILYPHLFWFFGHP 725
FD A GG P+L+ LFWFFGHP
Sbjct: 218 FDSALGGSPVLWQQLFWFFGHP 239
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 40.7 bits (91), Expect = 0.036
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +3
Query: 666 PAGGGDPILYPHLFWFFGHP 725
P GGG +L+ HLFWFFGHP
Sbjct: 270 PHGGGSALLWQHLFWFFGHP 289
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 40.7 bits (91), Expect = 0.036
Identities = 23/52 (44%), Positives = 28/52 (53%)
Frame = +2
Query: 257 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNI 412
L+LGA D+AF R+NNI F +VE GAGTG TV SS +
Sbjct: 91 LMLGASDMAFARLNNISFWLLVPSLILILTSALVEAGAGTGWTVKKICSSKM 142
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 40.3 bits (90), Expect = 0.047
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = +2
Query: 257 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 388
+++G+PD+AFPR+NNI F +VE G G+G TV
Sbjct: 89 ILIGSPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGCGSGWTV 132
Score = 35.5 bits (78), Expect = 1.3
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +3
Query: 42 RDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHA 191
+DIGTLY EL PG+ I G+ Q+YN ++TAHA
Sbjct: 15 KDIGTLYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYNVLITAHA 66
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 40.3 bits (90), Expect = 0.047
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +3
Query: 660 FDPAGGGDPILYPHLFWFFGHP 725
F+PA GGDP+L+ FWF+ HP
Sbjct: 230 FNPAVGGDPVLFQQFFWFYSHP 251
Score = 37.9 bits (84), Expect = 0.25
Identities = 26/81 (32%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Frame = +2
Query: 257 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGA-GTG*TVYPPLSSNIAHRGRSV 433
L+LGA D+A PR+N + GA G T Y P S A V
Sbjct: 97 LMLGARDVALPRVNAFSYWAFLGAIVLALMSYFFPGGAPSVGWTFYYPFS---AQSESGV 153
Query: 434 DLAIFSLHLAGISSIIGAINF 496
D + ++ L G SS++G NF
Sbjct: 154 DFYLAAILLLGFSSLLGNANF 174
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 39.9 bits (89), Expect = 0.063
Identities = 25/79 (31%), Positives = 37/79 (46%)
Frame = +2
Query: 257 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 436
L +GA D+AFP +N+I +V + G YPP + + + G VD
Sbjct: 149 LQIGARDVAFPILNSISLWLTAAGAALVMISLVVGAFSTGGWFGYPPYTETLYNPGIGVD 208
Query: 437 LAIFSLHLAGISSIIGAIN 493
I+SL LA + S + IN
Sbjct: 209 YWIWSLTLASLGSTLTGIN 227
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 39.9 bits (89), Expect = 0.063
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +3
Query: 660 FDPAGGGDPILYPHLFWFFGHP 725
F A GGD +L+ HLFW FGHP
Sbjct: 236 FQAAAGGDALLWQHLFWLFGHP 257
Score = 35.9 bits (79), Expect = 1.0
Identities = 21/77 (27%), Positives = 34/77 (44%)
Frame = +2
Query: 260 ILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDL 439
+LG+ D+AFPR+ F + +G +YPPLSS + G + D
Sbjct: 102 LLGSRDLAFPRLTAYGFWCYVFGGSMMIFSLLWGIAPDSGWFMYPPLSSTLGAPGINSDF 161
Query: 440 AIFSLHLAGISSIIGAI 490
+ + IS+I A+
Sbjct: 162 WLIGITFVEISAIAAAV 178
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 39.1 bits (87), Expect = 0.11
Identities = 25/80 (31%), Positives = 37/80 (46%)
Frame = +2
Query: 257 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 436
L++GA D+AFPR+N + + + T YPP S I H +
Sbjct: 88 LMIGAKDVAFPRVNALSVWLFYAGVLVALTTFFIPDPPDIMWTGYPPYSI-ITHGNTA-- 144
Query: 437 LAIFSLHLAGISSIIGAINF 496
FS+ L G +SI+G +NF
Sbjct: 145 FYTFSVLLLGFASILGGVNF 164
Score = 38.7 bits (86), Expect = 0.14
Identities = 16/29 (55%), Positives = 19/29 (65%), Gaps = 3/29 (10%)
Frame = +3
Query: 648 KYI---IFDPAGGGDPILYPHLFWFFGHP 725
KYI FD A GGD + Y +LFWF+ HP
Sbjct: 213 KYIGTHFFDAAAGGDALTYQNLFWFYSHP 241
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 39.1 bits (87), Expect = 0.11
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = +2
Query: 257 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 388
L++GA D++F R+NNI F +VE+GAGTG TV
Sbjct: 86 LMIGASDMSFARLNNISFWLLPPALVCLVTSTLVESGAGTGWTV 129
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 38.7 bits (86), Expect = 0.14
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +3
Query: 660 FDPAGGGDPILYPHLFWFFGHP 725
F A GGD +L+ HLFW FGHP
Sbjct: 236 FQVAEGGDSLLWQHLFWLFGHP 257
Score = 35.1 bits (77), Expect = 1.8
Identities = 19/77 (24%), Positives = 35/77 (45%)
Frame = +2
Query: 260 ILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDL 439
+LG+ D+A+PR++ F + +G +YPPL+S + G + D
Sbjct: 102 MLGSRDLAYPRLSAYGFWCYVLGGSMLIVALLAGIAPDSGWFMYPPLASTLGSPGINSDF 161
Query: 440 AIFSLHLAGISSIIGAI 490
+ + IS+I A+
Sbjct: 162 WLLGITFVEISAIAAAV 178
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 38.7 bits (86), Expect = 0.14
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +3
Query: 600 TCFSWSYYNIINRSKLKYIIFDPAGGGDPILYPHLFWFFGHP 725
TCF + +IN + GGG P+L+ HLFWF+ HP
Sbjct: 258 TCFFYPSGLVINNAA------PTVGGGQPLLWQHLFWFYSHP 293
Score = 34.3 bits (75), Expect = 3.1
Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Frame = +2
Query: 257 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP---PLSSNIAHRGR 427
L++GA D+AFP++N + + G G T YP L+ G
Sbjct: 123 LMIGADDMAFPKLNMLSYWFMWPAIACFGMSFKYAGGPAAGWTSYPVLADLAQAAPGSGT 182
Query: 428 SVDLAIFSLHLAGISSIIGAINF 496
+ + + G SS++G+IN+
Sbjct: 183 AQTYWLLGVTFVGFSSMMGSINY 205
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 38.7 bits (86), Expect = 0.14
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +3
Query: 660 FDPAGGGDPILYPHLFWFFGHP 725
FD A GG P+L+ HLFW F HP
Sbjct: 256 FDVAHGGRPLLWQHLFWMFAHP 277
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 38.7 bits (86), Expect = 0.14
Identities = 21/80 (26%), Positives = 36/80 (45%)
Frame = +2
Query: 257 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 436
L +GA D++FP +N + F + G T Y LS + +G +D
Sbjct: 96 LQIGARDVSFPFLNALGFWLFFFGHIFLNLSWFLGGAPDAGWTSYASLS--LHSKGHGID 153
Query: 437 LAIFSLHLAGISSIIGAINF 496
+ L ++G+ ++I INF
Sbjct: 154 FFVLGLQISGLGTLIAGINF 173
Score = 37.5 bits (83), Expect = 0.33
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +3
Query: 660 FDPAGGGDPILYPHLFWFFGHP 725
F+P GG+ +++ HLFW FGHP
Sbjct: 229 FNPELGGNTVIWEHLFWIFGHP 250
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 38.3 bits (85), Expect = 0.19
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +3
Query: 642 KLKYIIFDPAGGGDPILYPHLFWFFGHP 725
KL +F+P GG P+LY FWF+ HP
Sbjct: 232 KLGLSMFNPGIGGVPVLYQQFFWFYSHP 259
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 37.9 bits (84), Expect = 0.25
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +3
Query: 675 GGDPILYPHLFWFFGHP 725
GG P+L+ HLFWF GHP
Sbjct: 287 GGSPVLFQHLFWFLGHP 303
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 35.9 bits (79), Expect = 1.0
Identities = 22/60 (36%), Positives = 30/60 (50%)
Frame = +1
Query: 538 DQLPLFG*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFLIRLEEETQFYIHIYFGFL 717
DQ+ LF ++ IT AG IT+LL+DRN N F I + E +H Y +L
Sbjct: 12 DQINLFSWSISITVNLSILSLPMLAGTITMLLSDRNFNKFFFILIGGEYPI-LHQYMLWL 70
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 35.5 bits (78), Expect = 1.3
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +1
Query: 538 DQLPLFG*AVGITAFXXXXXXXXXAGAITILLTDRNLNT 654
D++ L ++ ITA AGAIT+LLTDRN+NT
Sbjct: 163 DKISLLSWSILITAVLLLLSLPVLAGAITMLLTDRNMNT 201
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 34.7 bits (76), Expect = 2.4
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3
Query: 660 FDPAGGGDPILYPHLFWFFGHP 725
F+ GG + Y HLFW FGHP
Sbjct: 240 FEVLRGGSVVFYQHLFWTFGHP 261
>UniRef50_Q6PW10 Cluster: Cytochrome oxidase subunit I; n=1;
Bohadschia argus|Rep: Cytochrome oxidase subunit I -
Bohadschia argus
Length = 247
Score = 33.9 bits (74), Expect = 4.1
Identities = 21/62 (33%), Positives = 29/62 (46%)
Frame = +1
Query: 277 YSIPTNK*YKILTPTPLPYIINFKKNCRKWCRNRMNSLPPTFI*YRT*RKIRRSCYFFTT 456
Y IP N+ ++L L + + K CRNRMN+LP R + YFF+T
Sbjct: 42 YGIPPNEQNELLVSPSLFHSTPSISSSGKSCRNRMNNLPTLIQNNSPRRSVSSPRYFFST 101
Query: 457 FS 462
S
Sbjct: 102 SS 103
>UniRef50_Q2ABI9 Cluster: NADH-ubiquinone oxidoreductase chain 2;
n=21; Neocoleoidea|Rep: NADH-ubiquinone oxidoreductase
chain 2 - Sepia officinalis (Common cuttlefish)
Length = 375
Score = 33.5 bits (73), Expect = 5.4
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +2
Query: 35 RHERYWNIIFYFWYLIRNNWNIFKTFNS 118
+ + YWNI+F+FWYLI ++ K NS
Sbjct: 344 KSQSYWNIMFHFWYLISFISHLAKINNS 371
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 33.5 bits (73), Expect = 5.4
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +3
Query: 663 DPAGGGDPILYPHLFWFFGHP 725
D G +L+ HLFWFFGHP
Sbjct: 243 DADNPGASLLWAHLFWFFGHP 263
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 601,111,943
Number of Sequences: 1657284
Number of extensions: 10260169
Number of successful extensions: 24991
Number of sequences better than 10.0: 98
Number of HSP's better than 10.0 without gapping: 23629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24911
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 59090914597
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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