Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0596
         (727 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    23   3.9  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    22   6.8  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         21   9.0  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    21   9.0  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    21   9.0  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   9.0  

>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 628 LLTDRNLNTSFLIRLEEETQFYIHI 702
           LLT R+  +S   R+ + TQ+  HI
Sbjct: 301 LLTSRDFLSSLAFRVFQSTQYIRHI 325


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 671 SRIKNDVFKFRSVNNIV 621
           +R+  D  K+R+ NNIV
Sbjct: 250 TRVVTDTIKYRNDNNIV 266


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +3

Query: 654 IIFDPAGGGDPILYPHLFWFF 716
           +I    G G P+L P+  W F
Sbjct: 92  VISKKVGDGGPLLQPYPDWSF 112


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +3

Query: 654 IIFDPAGGGDPILYPHLFWFF 716
           +I    G G P+L P+  W F
Sbjct: 92  VISKKVGDGGPLLQPYPDWSF 112


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +3

Query: 654 IIFDPAGGGDPILYPHLFWFF 716
           +I    G G P+L P+  W F
Sbjct: 92  VISKKVGDGGPLLQPYPDWSF 112


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -1

Query: 712 NQNKCGYKIGSPPPAGS 662
           + ++ G KIGSP PA S
Sbjct: 649 SSSRRGSKIGSPTPAES 665


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,254
Number of Sequences: 438
Number of extensions: 3395
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22535775
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)