BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= prgv0595 (662 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_Q0YLA0 Cluster: Rod shape-determining protein MreD, put... 36 0.66 UniRef50_Q55AX3 Cluster: Putative uncharacterized protein; n=1; ... 33 8.1 >UniRef50_Q0YLA0 Cluster: Rod shape-determining protein MreD, putative; n=3; Geobacter|Rep: Rod shape-determining protein MreD, putative - Geobacter sp. FRC-32 Length = 161 Score = 36.3 bits (80), Expect = 0.66 Identities = 15/28 (53%), Positives = 20/28 (71%) Frame = -1 Query: 131 LTVFFSTFVTSLYYLLLWFLFDMIRGLY 48 LTVFF+T VT L+ +LL F+F G+Y Sbjct: 101 LTVFFATIVTGLFNMLLLFIFSAANGIY 128 >UniRef50_Q55AX3 Cluster: Putative uncharacterized protein; n=1; Dictyostelium discoideum AX4|Rep: Putative uncharacterized protein - Dictyostelium discoideum AX4 Length = 1092 Score = 32.7 bits (71), Expect = 8.1 Identities = 19/51 (37%), Positives = 32/51 (62%) Frame = -1 Query: 434 NFKL*YGCLLFLLGIINKLYFVSIQANGLLNQEYTIIVNIF*SVNRFLSII 282 +F+L Y +LFL I+N+ + SIQ NGL+ EY I +++ + N S++ Sbjct: 6 SFQL-YFIILFL-SILNQRFGNSIQINGLIETEYDCIHSLYETFNLMSSVV 54 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 592,518,796 Number of Sequences: 1657284 Number of extensions: 10743911 Number of successful extensions: 24813 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 23591 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 24764 length of database: 575,637,011 effective HSP length: 98 effective length of database: 413,223,179 effective search space used: 50413227838 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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