Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0595
         (662 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   2.2  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   3.9  
AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    22   5.2  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    22   5.2  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    22   5.2  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 11/28 (39%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = -1

Query: 140 VARLTV-FFSTFVTSLYYLLLWFLFDMI 60
           + R TV +F  ++   Y LLL+ + DMI
Sbjct: 147 LCRHTVEYFQNYIHFFYQLLLYLITDMI 174


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = -1

Query: 116 STFVTSLYYLLLWFLFDMI 60
           +TF ++LY+L + FLF +I
Sbjct: 230 NTFWSALYFLTIIFLFFII 248


>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 212

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 585 FYGKGVPVGYEEDF 544
           FYG+G+  G+E+ F
Sbjct: 78  FYGQGMNAGFEDCF 91


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 585 FYGKGVPVGYEEDF 544
           FYG+G+  G+E+ F
Sbjct: 311 FYGQGMNAGFEDCF 324


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 585 FYGKGVPVGYEEDF 544
           FYG+G+  G+E+ F
Sbjct: 311 FYGQGMNAGFEDCF 324


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,082
Number of Sequences: 336
Number of extensions: 3060
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17177325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)