Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0595
         (662 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY062207-1|AAL58568.1|  504|Anopheles gambiae cytochrome P450 CY...    27   0.40 
AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein...    24   3.7  

>AY062207-1|AAL58568.1|  504|Anopheles gambiae cytochrome P450
           CYP6S2 protein.
          Length = 504

 Score = 27.5 bits (58), Expect = 0.40
 Identities = 17/45 (37%), Positives = 24/45 (53%)
 Frame = -3

Query: 618 RFLLVRTFLNLFYGKGVPVGYEEDFRDLDSNLFLKNYLEWRIFRS 484
           R ++V+ F N F  +GV     E+F  L +NLF     +WR  RS
Sbjct: 91  RTVMVKDF-NYFVDRGVYSN--EEFDPLSANLFFMEGAKWRKLRS 132


>AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 459

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 13/49 (26%), Positives = 25/49 (51%)
 Frame = -1

Query: 317 IF*SVNRFLSIIKLYPHFLETKQTK*NSSICLTTDTILSIAPIFKQSCI 171
           IF  V   +++I L+ +   TK        CL T+ ++ ++ +F Q C+
Sbjct: 70  IFGCVGNLMALIHLWRNVRNTKHAL--MLKCLLTNDLIGLSGMFVQMCL 116


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 627,052
Number of Sequences: 2352
Number of extensions: 11008
Number of successful extensions: 37
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66068490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)