Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0594
         (590 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IAK0 Cluster: Putative uncharacterized protein PF00_0...    36   0.71 

>UniRef50_Q8IAK0 Cluster: Putative uncharacterized protein
           PF00_0001; n=1; Plasmodium falciparum|Rep: Putative
           uncharacterized protein PF00_0001 - Plasmodium
           falciparum
          Length = 677

 Score = 35.9 bits (79), Expect = 0.71
 Identities = 17/82 (20%), Positives = 40/82 (48%)
 Frame = -2

Query: 544 YSELDYCIQITVIKHRLLSVILHVATTIVLCPYLDNVYITLVSEIRKSFCTERYYMI*IT 365
           Y  +++C+++  ++++  S I +      +C Y++N  I ++  ++  F  +  Y   I 
Sbjct: 65  YLSINHCLKLYYLQNKNSSYIYNTRLLTYICRYINNTPINIILNLKNEFILDYIYNCNIY 124

Query: 364 SFKGTFRIGYIAANLSFRFLYN 299
            +K  F+  Y      + F+YN
Sbjct: 125 KYKYFFQTEY------YHFIYN 140


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 490,263,539
Number of Sequences: 1657284
Number of extensions: 8992730
Number of successful extensions: 16119
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 15628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16113
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41073165837
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)