Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0594
         (590 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    23   1.9  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    22   4.5  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    22   4.5  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = -2

Query: 172 FVTYKNLLSIRITTETQYACNARDSYTGIIKFIY 71
           FV   N    +I   T+  CN   SY GI   +Y
Sbjct: 601 FVMISNYDDDKIDQSTEGVCNDAGSYCGIKDKLY 634


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 370 FISYNIFQCKMIFVF 414
           F+SYNI+ C+ +  F
Sbjct: 192 FVSYNIYVCQTVSNF 206


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 370 FISYNIFQCKMIFVF 414
           F+SYNI+ C+ +  F
Sbjct: 118 FVSYNIYVCQTVSNF 132


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,801
Number of Sequences: 336
Number of extensions: 2767
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14830622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)