Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0594
(590 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 26 0.24
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 26 0.24
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 23 1.7
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 23 1.7
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 23 3.0
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 23 3.0
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 23 3.0
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 23 3.0
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 23 3.0
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 23 3.0
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 23 3.0
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 23 3.0
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 22 3.9
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 22 5.2
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 22 5.2
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 21 6.8
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 21 6.8
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 26.2 bits (55), Expect = 0.24
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = -2
Query: 334 IAANLSFRFLYNNHYSY*KLYQNNFND 254
I ++LS + Y+N+ +Y Y NN+N+
Sbjct: 81 IISSLSNNYKYSNYNNYNNNYNNNYNN 107
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 26.2 bits (55), Expect = 0.24
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = -2
Query: 334 IAANLSFRFLYNNHYSY*KLYQNNFND 254
I ++LS + Y+N+ +Y Y NN+N+
Sbjct: 81 IISSLSNNYKYSNYNNYNNNYNNNYNN 107
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 23.4 bits (48), Expect = 1.7
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = -2
Query: 334 IAANLSFRFLYNNHYSY*KLYQNNFND 254
I ++LS + Y+N+ +Y NN+N+
Sbjct: 314 IISSLSNNYKYSNYNNYNNYNNNNYNN 340
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 23.4 bits (48), Expect = 1.7
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -2
Query: 304 YNNHYSY*KLYQNNFND 254
YNN+Y+ Y NN+N+
Sbjct: 330 YNNNYNNYNNYNNNYNN 346
Score = 21.0 bits (42), Expect = 9.0
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -2
Query: 304 YNNHYSY*KLYQNNF 260
YNN+ +Y Y NN+
Sbjct: 334 YNNYNNYNNNYNNNY 348
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 22.6 bits (46), Expect = 3.0
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -2
Query: 334 IAANLSFRFLYNNHYSY*KLYQNNFN 257
I ++LS + ++NN+ +Y KL N N
Sbjct: 81 IISSLSNKTIHNNNNNYKKLQYYNIN 106
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 22.6 bits (46), Expect = 3.0
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -2
Query: 334 IAANLSFRFLYNNHYSY*KLYQNNFN 257
I ++LS + ++NN+ +Y KL N N
Sbjct: 81 IISSLSNKTIHNNNNNYKKLQYYNIN 106
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 22.6 bits (46), Expect = 3.0
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -2
Query: 334 IAANLSFRFLYNNHYSY*KLYQNNFN 257
I ++LS + ++NN+ +Y KL N N
Sbjct: 81 IISSLSNKTIHNNNNNYKKLQYYNIN 106
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 22.6 bits (46), Expect = 3.0
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -2
Query: 334 IAANLSFRFLYNNHYSY*KLYQNNFN 257
I ++LS + ++NN+ +Y KL N N
Sbjct: 81 IISSLSNKTIHNNNNNYKKLQYYNIN 106
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 22.6 bits (46), Expect = 3.0
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -2
Query: 325 NLSFRFLYNNHYSY*KLYQNNFN 257
N ++++ YNN Y+Y NN+N
Sbjct: 93 NNNYKYNYNNKYNY---NNNNYN 112
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.6 bits (46), Expect = 3.0
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2
Query: 304 YNNHYSY*KLYQNNFN 257
YNN+Y+ KLY N N
Sbjct: 314 YNNNYNSKKLYYNIIN 329
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 3.0
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2
Query: 304 YNNHYSY*KLYQNNFN 257
YNN+Y+ KLY N N
Sbjct: 325 YNNNYNSKKLYYNIIN 340
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 22.6 bits (46), Expect = 3.0
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -2
Query: 334 IAANLSFRFLYNNHYSY*KLYQNNFN 257
I ++LS + ++NN+ +Y KL N N
Sbjct: 314 IISSLSNKTIHNNNNNYKKLQYYNIN 339
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 22.2 bits (45), Expect = 3.9
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = -2
Query: 325 NLSFRFLYNNHYSY*KLYQNNFND 254
N ++++ YNN+ Y NN+N+
Sbjct: 326 NNNYKYNYNNNNYNNNNYNNNYNN 349
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.8 bits (44), Expect = 5.2
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -1
Query: 458 IMSLLRQCIHNVGIGNTKIILH*KILYDINYI 363
I SL I N+ N + K+ Y+INYI
Sbjct: 82 ISSLSNNYISNISNYNNNNNYNKKLYYNINYI 113
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 21.8 bits (44), Expect = 5.2
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -1
Query: 458 IMSLLRQCIHNVGIGNTKIILH*KILYDINYI 363
I SL I N+ N + K+ Y+INYI
Sbjct: 320 ISSLSNNYISNISNYNNNNNYNKKLYYNINYI 351
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.4 bits (43), Expect = 6.8
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -1
Query: 458 IMSLLRQCIHNVGIGNTKIILH*KILYDINYI 363
I SL I N+ N + K+ Y+INYI
Sbjct: 82 ISSLSNNYISNISNYNNDNNYNKKLYYNINYI 113
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.4 bits (43), Expect = 6.8
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = -2
Query: 334 IAANLSFRFLYNNHYSY*KLYQNNFND 254
I ++LS + ++NN+ Y NN+N+
Sbjct: 314 IISSLSNKTIHNNNNYNNNNYNNNYNN 340
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,035
Number of Sequences: 438
Number of extensions: 3662
Number of successful extensions: 20
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17237673
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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