Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0592
         (627 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    27   0.17 
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    23   1.6  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    23   1.6  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    23   2.8  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    23   2.8  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   6.4  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    21   6.4  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      21   6.4  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      21   6.4  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 26.6 bits (56), Expect = 0.17
 Identities = 10/44 (22%), Positives = 24/44 (54%)
 Frame = +2

Query: 284 HCIFFLVCLFKYRYYLYVITVYNSLNIFIYVCV*LFGNMFI*FC 415
           +C+  ++    Y YY +++    ++++ + VC+  F  M + FC
Sbjct: 229 YCVLIILLCIYYFYYAFILF---TVHLLLLVCIYYFYYMHLLFC 269



 Score = 24.6 bits (51), Expect = 0.69
 Identities = 10/44 (22%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
 Frame = +2

Query: 290 IFFLVCLFKY--RYYLYVITVYNSLNIFIYVCV*LFGNMFI*FC 415
           +FFL+C++ +   + ++ + +   L I+ + C  +   M + FC
Sbjct: 140 LFFLLCIYYFYCAFIIFTVHLLFLLCIYHFFCAFIIFTMHLLFC 183


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +3

Query: 39  LAFNIDSMHCDKSGSTTAC 95
           LAF+ID   CD  G    C
Sbjct: 71  LAFDIDKQTCDWKGKVNNC 89


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -3

Query: 577 FGDRTNYGLYNRRLCPDARLKR 512
           +G+     +Y RR C + RLK+
Sbjct: 226 YGNNCEIDMYMRRKCQECRLKK 247


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/39 (25%), Positives = 19/39 (48%)
 Frame = +2

Query: 230 PESRSEEYKK*FLELLAEHCIFFLVCLFKYRYYLYVITV 346
           P   + +Y+K  + +L    + F +CL  +R   + I V
Sbjct: 279 PSQSAIKYRKQVILMLGTVVLAFFICLLPFRALTFWIIV 317


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 314 KYRYYLYVITVYNSLNIF 367
           K+  YLY I+V   LN+F
Sbjct: 393 KFPIYLYRISVETKLNVF 410


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +2

Query: 290 IFFLVCLFKYRYYLYVITVY 349
           +  L  +F + Y++Y+ TVY
Sbjct: 138 VSLLQLVFVFCYFIYLFTVY 157


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 314 KYRYYLYVITVYNSLNIF 367
           K+  YLY ++V   LN+F
Sbjct: 395 KFPIYLYRMSVETKLNVF 412


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 314 KYRYYLYVITVYNSLNIF 367
           K+  YLY ++V   LN+F
Sbjct: 393 KFPIYLYRMSVETKLNVF 410


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 314 KYRYYLYVITVYNSLNIF 367
           K+  YLY ++V   LN+F
Sbjct: 395 KFPIYLYRMSVETKLNVF 412


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,147
Number of Sequences: 336
Number of extensions: 2583
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)