Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0592
         (627 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    23   1.8  
AB095514-1|BAC76336.1|   72|Apis mellifera ecdyson receptor prot...    23   1.8  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    23   2.4  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    23   2.4  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    22   5.6  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    22   5.6  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           22   5.6  

>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -3

Query: 577 FGDRTNYGLYNRRLCPDARLKR 512
           +G+     +Y RR C + RLK+
Sbjct: 225 YGNNCEIDMYMRRKCQECRLKK 246


>AB095514-1|BAC76336.1|   72|Apis mellifera ecdyson receptor
           protein.
          Length = 72

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -3

Query: 577 FGDRTNYGLYNRRLCPDARLKR 512
           +G+     +Y RR C + RLK+
Sbjct: 22  YGNNCEIDMYMRRKCQECRLKK 43


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +2

Query: 326 YLYVITVYNSLNIFIYVCV*LFGNMFI*FC 415
           Y  +    N LNI     + LFG MF  FC
Sbjct: 49  YNIISAAVNRLNIPANEILELFGRMFFEFC 78


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +2

Query: 326 YLYVITVYNSLNIFIYVCV*LFGNMFI*FC 415
           Y  +    N LNI     + LFG MF  FC
Sbjct: 49  YNIISAAVNRLNIPANEILELFGRMFFEFC 78


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = -1

Query: 582 GFLVTALITDYIIGGCVLTHGSNDRSVAAKQSL-VTNYSG 466
           GFL+  ++  ++I      HG   R+V  KQ +   +Y+G
Sbjct: 162 GFLLAGIVQPFLIHWIWTPHGWMRRNVLNKQHVHFHDYTG 201


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 10/40 (25%), Positives = 21/40 (52%)
 Frame = -1

Query: 324 YLYLKRQTKKKMQCSASNSRNYFLYSSDLDSGRVHTFESV 205
           YL++    K +M  S +  R  F  S + +  ++HT +++
Sbjct: 524 YLHIAGPGKIQMDSSTNFGREDFWNSINFNENKLHTSDTL 563


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 10/40 (25%), Positives = 21/40 (52%)
 Frame = -1

Query: 324 YLYLKRQTKKKMQCSASNSRNYFLYSSDLDSGRVHTFESV 205
           YL++    K +M  S +  R  F  S + +  ++HT +++
Sbjct: 524 YLHIAGPGKIQMDSSTNFGREDFWNSINFNENKLHTSDTL 563


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,734
Number of Sequences: 438
Number of extensions: 3571
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18704709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)