Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0591
         (692 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    27   0.15 
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    24   1.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   5.5  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   7.2  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   7.2  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   9.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   9.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   9.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   9.6  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 27.1 bits (57), Expect = 0.15
 Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 4/88 (4%)
 Frame = +3

Query: 63  FVFFFWINLASTYYI---VRRIFIEAYGYCF-KFVLKTLVSKQSMHYSNSSIHFSQIFEF 230
           FVF ++I L + YYI   V    I  +GY   KF++ T     +         FS++   
Sbjct: 145 FVFCYFIYLFTVYYIYYSVHEASIINFGYTLAKFMIFTSTCIYTNLLRIIEADFSKLNHL 204

Query: 231 MIKNSCIEFSEIMYILTIIECKNVSILY 314
           +     ++    +Y   +  CK ++ LY
Sbjct: 205 LSGTENLDLVLPIYSQLVFMCKKINKLY 232


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +1

Query: 73  FSGSIWPVHIIL 108
           FSG +WP+ I+L
Sbjct: 16  FSGKLWPISIVL 27


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +3

Query: 231  MIKNSCIEFSEIMYILTIIECKNV 302
            MI + CI F+E ++I ++I  K +
Sbjct: 1160 MILSGCIIFTEGIWICSLIHRKKI 1183


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 176 LTNQSFQNEFETITI 132
           LTN +FQN F  I +
Sbjct: 454 LTNMTFQNVFAVINV 468


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 176 LTNQSFQNEFETITI 132
           LTN +FQN F  I +
Sbjct: 454 LTNMTFQNVFAVINV 468


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 310 YIFIVTQCKKLIFGFAFA 363
           YIF    CK +I GF++A
Sbjct: 392 YIFGKFACKIMIQGFSYA 409


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 310 YIFIVTQCKKLIFGFAFA 363
           YIF    CK +I GF++A
Sbjct: 392 YIFGKFACKIMIQGFSYA 409


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 310 YIFIVTQCKKLIFGFAFA 363
           YIF    CK +I GF++A
Sbjct: 392 YIFGKFACKIMIQGFSYA 409


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 310 YIFIVTQCKKLIFGFAFA 363
           YIF    CK +I GF++A
Sbjct: 392 YIFGKFACKIMIQGFSYA 409


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,086
Number of Sequences: 336
Number of extensions: 3215
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)