Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0591
         (692 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC055413-1|AAH55413.1|  228|Homo sapiens similar to RIKEN cDNA 1...    31   3.0  
BC074962-1|AAH74962.2|  291|Homo sapiens OR6W1P protein protein.       31   3.9  
BC074961-1|AAH74961.2|  291|Homo sapiens OR6W1P protein protein.       31   3.9  
BC069382-1|AAH69382.2|  280|Homo sapiens OR6W1P protein protein.       31   3.9  
AF399607-1|AAK95092.1|  216|Homo sapiens olfactory receptor prot...    31   3.9  
AF286696-1|AAK69553.1|  280|Homo sapiens protein ( Homo sapiens ...    31   3.9  
AB065957-1|BAC06170.1|  313|Homo sapiens seven transmembrane hel...    31   3.9  
AB065875-1|BAC06093.1|  280|Homo sapiens seven transmembrane hel...    31   3.9  
BC126466-1|AAI26467.1| 1770|Homo sapiens Nedd4 binding protein 2...    31   5.2  
AY267013-1|AAP22172.1| 1770|Homo sapiens BCL-3 binding protein p...    31   5.2  
AB037834-1|BAA92651.1| 1399|Homo sapiens KIAA1413 protein protein.     31   5.2  
AF299096-1|AAG17908.1|  109|Homo sapiens immunoglobulin heavy ch...    30   9.0  

>BC055413-1|AAH55413.1|  228|Homo sapiens similar to RIKEN cDNA
           1700011J18 protein.
          Length = 228

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = +3

Query: 291 CKNVSILYLYSNTM-QKTNIWFCIRKYTCSTFKRCLFLIQ*INCVMFFEHLY 443
           CKN+S+LYLY N + Q TN+ +            C+  I+ +  +   E LY
Sbjct: 49  CKNLSVLYLYDNCISQITNLNYATNLTHLYLQNNCISCIENLRSLKKLEKLY 100


>BC074962-1|AAH74962.2|  291|Homo sapiens OR6W1P protein protein.
          Length = 291

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +3

Query: 282 IIECKNVSILYLYSNTMQKTNIWFC 356
           ++ C  V  L + S T+QKT +WFC
Sbjct: 119 VVACWVVGFLSIVSPTLQKTRLWFC 143


>BC074961-1|AAH74961.2|  291|Homo sapiens OR6W1P protein protein.
          Length = 291

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +3

Query: 282 IIECKNVSILYLYSNTMQKTNIWFC 356
           ++ C  V  L + S T+QKT +WFC
Sbjct: 119 VVACWVVGFLSIVSPTLQKTRLWFC 143


>BC069382-1|AAH69382.2|  280|Homo sapiens OR6W1P protein protein.
          Length = 280

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +3

Query: 282 IIECKNVSILYLYSNTMQKTNIWFC 356
           ++ C  V  L + S T+QKT +WFC
Sbjct: 108 VVACWVVGFLSIVSPTLQKTRLWFC 132


>AF399607-1|AAK95092.1|  216|Homo sapiens olfactory receptor
           protein.
          Length = 216

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +3

Query: 282 IIECKNVSILYLYSNTMQKTNIWFC 356
           ++ C  V  L + S T+QKT +WFC
Sbjct: 78  VVACWVVGFLSIVSPTLQKTRLWFC 102


>AF286696-1|AAK69553.1|  280|Homo sapiens protein ( Homo sapiens
           olfactory receptor sdolf mRNA, complete cds. ).
          Length = 280

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +3

Query: 282 IIECKNVSILYLYSNTMQKTNIWFC 356
           ++ C  V  L + S T+QKT +WFC
Sbjct: 108 VVACWVVGFLSIVSPTLQKTRLWFC 132


>AB065957-1|BAC06170.1|  313|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 313

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +3

Query: 282 IIECKNVSILYLYSNTMQKTNIWFC 356
           ++ C  V  L + S T+QKT +WFC
Sbjct: 141 VVACWVVGFLSIVSPTLQKTRLWFC 165


>AB065875-1|BAC06093.1|  280|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 280

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +3

Query: 282 IIECKNVSILYLYSNTMQKTNIWFC 356
           ++ C  V  L + S T+QKT +WFC
Sbjct: 108 VVACWVVGFLSIVSPTLQKTRLWFC 132


>BC126466-1|AAI26467.1| 1770|Homo sapiens Nedd4 binding protein 2
            protein.
          Length = 1770

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = +3

Query: 159  KTLVSKQSMHYSNSSIHFSQIFEFMIKNSCIEFSEIMYILTIIECK 296
            K LV  ++    +S  HFS IF F+   S +E +E +Y    +E K
Sbjct: 1267 KNLVVTETGDNIHSPSHFSDIFNFVSSTSNLELNEEIYFTDSLEIK 1312


>AY267013-1|AAP22172.1| 1770|Homo sapiens BCL-3 binding protein
            protein.
          Length = 1770

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = +3

Query: 159  KTLVSKQSMHYSNSSIHFSQIFEFMIKNSCIEFSEIMYILTIIECK 296
            K LV  ++    +S  HFS IF F+   S +E +E +Y    +E K
Sbjct: 1267 KNLVVTETGDNIHSPSHFSDIFNFVSSTSNLELNEEIYFTDSLEIK 1312


>AB037834-1|BAA92651.1| 1399|Homo sapiens KIAA1413 protein protein.
          Length = 1399

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = +3

Query: 159  KTLVSKQSMHYSNSSIHFSQIFEFMIKNSCIEFSEIMYILTIIECK 296
            K LV  ++    +S  HFS IF F+   S +E +E +Y    +E K
Sbjct: 913  KNLVVTETGDNIHSPSHFSDIFNFVSSTSNLELNEEIYFTDSLEIK 958


>AF299096-1|AAG17908.1|  109|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 109

 Score = 29.9 bits (64), Expect = 9.0
 Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
 Frame = +3

Query: 309 LYLYSNTM--QKTNIWFCIRKYTCSTFKRCLFL 401
           LYL  N++  + T ++FC R+Y+ S F R L++
Sbjct: 63  LYLQMNSLRAEDTAVYFCAREYSSSWFPRTLYV 95


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,943,980
Number of Sequences: 237096
Number of extensions: 1560460
Number of successful extensions: 2830
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2830
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)