Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0589
         (698 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    23   1.8  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   3.2  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    22   4.2  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   5.5  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   5.5  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   5.5  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   9.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.7  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   9.7  

>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 15/47 (31%), Positives = 20/47 (42%)
 Frame = +1

Query: 319 VQQGIPKDSIIVSEGANTMDIGRGLLLNNHPRHRLDAGTFGTMGVGP 459
           + +G P   I +  G      GRG  L +     L AGT+G    GP
Sbjct: 248 LDEGAPPSKINLGLGT----YGRGFALADPTNTSLYAGTYGGSDAGP 290


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/16 (50%), Positives = 12/16 (75%), Gaps = 1/16 (6%)
 Frame = -3

Query: 273 CLSLYKS-VFAFCFCF 229
           CL  + + VFAFC+C+
Sbjct: 542 CLIQFNTIVFAFCYCY 557



 Score = 21.4 bits (43), Expect = 7.3
 Identities = 7/16 (43%), Positives = 12/16 (75%), Gaps = 1/16 (6%)
 Frame = -3

Query: 273 CLSLYKS-VFAFCFCF 229
           CL  + + VF+FC+C+
Sbjct: 261 CLIQFNTIVFSFCYCY 276


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +3

Query: 363 SEYHGYWPRFIAQQSSETQARCW 431
           S  H Y PR +  ++S  QA  W
Sbjct: 140 SSMHKYQPRILIVKASTAQALGW 162


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = +2

Query: 296 TTTLFSKQFNKAFQKIQSLSAKERIPWILAEVYCSTI 406
           T    +K+ ++  Q + SL   ER+ WI   ++   I
Sbjct: 95  TRAYCNKKIDRNLQFVVSLPEVERVQWIWLLIFAYLI 131


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = +2

Query: 296 TTTLFSKQFNKAFQKIQSLSAKERIPWILAEVYCSTI 406
           T    +K+ ++  Q + SL   ER+ WI   ++   I
Sbjct: 95  TRAYCNKKIDRNLQFVVSLPEVERVQWIWLLIFAYLI 131


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +3

Query: 378 YWPRFIAQQSSETQARCWYIWH 443
           Y P F  QQ+  +Q   W++ H
Sbjct: 218 YSPTFTQQQTQYSQYGSWFLPH 239


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 11/41 (26%), Positives = 23/41 (56%)
 Frame = +2

Query: 311 SKQFNKAFQKIQSLSAKERIPWILAEVYCSTIIRDTG*MLV 433
           S++  +  Q+I  + +  + P+I++ + C T  R  G +LV
Sbjct: 491 SEEIRQFTQEINIMKSVRQHPYIVSLIGCVTEGRAEGPLLV 531


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -3

Query: 342  IFWNALLNC 316
            I WN LLNC
Sbjct: 1123 ICWNVLLNC 1131


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -3

Query: 648 YFFIKPIXNSIIVYYDY 598
           Y+F+ P+   + +YY Y
Sbjct: 134 YYFVVPLFFLLCIYYFY 150


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,611
Number of Sequences: 336
Number of extensions: 3996
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)