Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0589
(698 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ131753-1|CAB60200.1| 578|Homo sapiens 2-hydroxyphytanoyl-CoA ... 138 2e-32
BC001627-1|AAH01627.1| 578|Homo sapiens 2-hydroxyacyl-CoA lyase... 138 2e-32
AK125241-1|BAC86096.1| 569|Homo sapiens protein ( Homo sapiens ... 91 3e-18
U61263-1|AAC50934.1| 632|Homo sapiens acetolactate synthase hom... 64 3e-10
BC011761-1|AAH11761.1| 632|Homo sapiens ilvB (bacterial acetola... 64 3e-10
BC011722-1|AAH11722.1| 632|Homo sapiens ilvB (bacterial acetola... 64 3e-10
AC004794-3|AAC18916.1| 393|Homo sapiens Acetolactate synthase p... 64 3e-10
AC003956-1|AAB94632.1| 632|Homo sapiens acetolactate synthase p... 64 3e-10
>AJ131753-1|CAB60200.1| 578|Homo sapiens 2-hydroxyphytanoyl-CoA
lyase protein.
Length = 578
Score = 138 bits (334), Expect = 2e-32
Identities = 67/117 (57%), Positives = 84/117 (71%)
Frame = +1
Query: 241 KSKHRFVEAQASSTAVPLNYYTVFKTVQQGIPKDSIIVSEGANTMDIGRGLLLNNHPRHR 420
KS + AS ++P+NYYTVF VQ+ +P+D +VSEGANTMDIGR +L N PRHR
Sbjct: 358 KSNEAASKELASKKSLPMNYYTVFYHVQEQLPRDCFVVSEGANTMDIGRTVLQNYLPRHR 417
Query: 421 LDAGTFGTMGVGPGFAIAAAMWCRDYAPGNVSFVLKETLLLGFSGMEIETMFRYKLP 591
LDAGTFGTMGVG GFAIAAA+ +D +PG+ ++ GFSGME+ET+ RY LP
Sbjct: 418 LDAGTFGTMGVGLGFAIAAAVVAKDRSPGHWIICVEGDSAFGFSGMEVETICRYNLP 474
Score = 81.0 bits (191), Expect = 4e-15
Identities = 35/81 (43%), Positives = 53/81 (65%)
Frame = +2
Query: 8 ARMNWMLHFGQPPRYAPDVKIIQVEISPEEFHNSKKSELAVHSDIRPFTEALVKRLSERK 187
AR+NW+LHFG PPRY PDVK IQV+I EE N+ K + + +I T+ L++ L +
Sbjct: 281 ARLNWILHFGLPPRYQPDVKFIQVDICAEELGNNVKPAVTLLGNIHAVTKQLLEELDKTP 340
Query: 188 FSLQPQNNSWWQGLKQKQKAN 250
+ P+ + WW+ L++K K+N
Sbjct: 341 WQYPPE-SKWWKTLREKMKSN 360
>BC001627-1|AAH01627.1| 578|Homo sapiens 2-hydroxyacyl-CoA lyase 1
protein.
Length = 578
Score = 138 bits (333), Expect = 2e-32
Identities = 67/117 (57%), Positives = 83/117 (70%)
Frame = +1
Query: 241 KSKHRFVEAQASSTAVPLNYYTVFKTVQQGIPKDSIIVSEGANTMDIGRGLLLNNHPRHR 420
KS + AS ++P+NYYTVF VQ+ +P+D +VSEGANTMDIGR +L N PRHR
Sbjct: 358 KSNEAASKELASKKSLPMNYYTVFYHVQEQLPRDCFVVSEGANTMDIGRTVLQNYLPRHR 417
Query: 421 LDAGTFGTMGVGPGFAIAAAMWCRDYAPGNVSFVLKETLLLGFSGMEIETMFRYKLP 591
LDAGTFGTMGVG GFAIAAA+ +D +PG ++ GFSGME+ET+ RY LP
Sbjct: 418 LDAGTFGTMGVGLGFAIAAAVVAKDRSPGQWIICVEGDSAFGFSGMEVETICRYNLP 474
Score = 81.0 bits (191), Expect = 4e-15
Identities = 35/81 (43%), Positives = 53/81 (65%)
Frame = +2
Query: 8 ARMNWMLHFGQPPRYAPDVKIIQVEISPEEFHNSKKSELAVHSDIRPFTEALVKRLSERK 187
AR+NW+LHFG PPRY PDVK IQV+I EE N+ K + + +I T+ L++ L +
Sbjct: 281 ARLNWILHFGLPPRYQPDVKFIQVDICAEELGNNVKPAVTLLGNIHAVTKQLLEELDKTP 340
Query: 188 FSLQPQNNSWWQGLKQKQKAN 250
+ P+ + WW+ L++K K+N
Sbjct: 341 WQYPPE-SKWWKTLREKMKSN 360
>AK125241-1|BAC86096.1| 569|Homo sapiens protein ( Homo sapiens
cDNA FLJ43251 fis, clone HEART2006131, weakly similar
to Mus musculus 2-hydroxyphytanoyl-CoA lyase
(Hpcl-pending). ).
Length = 569
Score = 91.5 bits (217), Expect = 3e-18
Identities = 55/116 (47%), Positives = 71/116 (61%), Gaps = 1/116 (0%)
Frame = +1
Query: 247 KHRFVEAQASSTAVPLNYYTVFKTVQQGIPKDSII-VSEGANTMDIGRGLLLNNHPRHRL 423
K + ++ S +A+ LNY T F ++ +P++ I+ VSEGANTMDIGR + PRHRL
Sbjct: 356 KTKTAGSKGSDSAI-LNYSTAFTVIKSLLPENDIVYVSEGANTMDIGRSYFDVHEPRHRL 414
Query: 424 DAGTFGTMGVGPGFAIAAAMWCRDYAPGNVSFVLKETLLLGFSGMEIETMFRYKLP 591
DAGT TMGVG G+AI A + D A VS V GFS ME+ET R +LP
Sbjct: 415 DAGTGATMGVGMGYAIGAQSYYGD-AKRVVSIVGDSA--FGFSAMELETAIRSRLP 467
Score = 60.1 bits (139), Expect = 7e-09
Identities = 36/124 (29%), Positives = 67/124 (54%)
Frame = +2
Query: 8 ARMNWMLHFGQPPRYAPDVKIIQVEISPEEFHNSKKSELAVHSDIRPFTEALVKRLSERK 187
AR+NW+LH+G PR++ V+ IQ++I+PEE N+++ L + DI+ + + L+ +
Sbjct: 276 ARLNWILHYGHSPRWSNKVRFIQIDIAPEELGNNRQDTLPLLGDIQLVVSQITQALTGKL 335
Query: 188 FSLQPQNNSWWQGLKQKQKANTDL*RLKQAALQYH*TTTLFSKQFNKAFQKIQSLSAKER 367
++ P + GL K K N + + K A + + L ++ AF I+SL +
Sbjct: 336 SNINP---DYVSGLVNKVKQNVE--KTKTAGSKGSDSAIL---NYSTAFTVIKSLLPEND 387
Query: 368 IPWI 379
I ++
Sbjct: 388 IVYV 391
>U61263-1|AAC50934.1| 632|Homo sapiens acetolactate synthase
homolog protein.
Length = 632
Score = 64.5 bits (150), Expect = 3e-10
Identities = 40/121 (33%), Positives = 62/121 (51%)
Frame = +1
Query: 229 ETETKSKHRFVEAQASSTAVPLNYYTVFKTVQQGIPKDSIIVSEGANTMDIGRGLLLNNH 408
E + + + F E A A LN V + V++ +P +SI+V +G + + L+
Sbjct: 424 EADRQKEQTFREKAAMPVAQHLNPVQVLQLVEETLPDNSILVVDGGDFVGTAAHLVQPRG 483
Query: 409 PRHRLDAGTFGTMGVGPGFAIAAAMWCRDYAPGNVSFVLKETLLLGFSGMEIETMFRYKL 588
P LD G FGT+GVG GFA+ A + CR P + L G+S +E +T R+K+
Sbjct: 484 PLRWLDPGAFGTLGVGAGFALGAKL-CR---PDAEVWCLFGDGAFGYSLIEFDTFVRHKI 539
Query: 589 P 591
P
Sbjct: 540 P 540
>BC011761-1|AAH11761.1| 632|Homo sapiens ilvB (bacterial
acetolactate synthase)-like protein.
Length = 632
Score = 64.5 bits (150), Expect = 3e-10
Identities = 40/121 (33%), Positives = 62/121 (51%)
Frame = +1
Query: 229 ETETKSKHRFVEAQASSTAVPLNYYTVFKTVQQGIPKDSIIVSEGANTMDIGRGLLLNNH 408
E + + + F E A A LN V + V++ +P +SI+V +G + + L+
Sbjct: 424 EADRQKEQTFREKAAMPVAQHLNPVQVLQLVEETLPDNSILVVDGGDFVGTAAHLVQPRG 483
Query: 409 PRHRLDAGTFGTMGVGPGFAIAAAMWCRDYAPGNVSFVLKETLLLGFSGMEIETMFRYKL 588
P LD G FGT+GVG GFA+ A + CR P + L G+S +E +T R+K+
Sbjct: 484 PLRWLDPGAFGTLGVGAGFALGAKL-CR---PDAEVWCLFGDGAFGYSLIEFDTFVRHKI 539
Query: 589 P 591
P
Sbjct: 540 P 540
>BC011722-1|AAH11722.1| 632|Homo sapiens ilvB (bacterial
acetolactate synthase)-like protein.
Length = 632
Score = 64.5 bits (150), Expect = 3e-10
Identities = 40/121 (33%), Positives = 62/121 (51%)
Frame = +1
Query: 229 ETETKSKHRFVEAQASSTAVPLNYYTVFKTVQQGIPKDSIIVSEGANTMDIGRGLLLNNH 408
E + + + F E A A LN V + V++ +P +SI+V +G + + L+
Sbjct: 424 EADRQKEQTFREKAAMPVAQHLNPVQVLQLVEETLPDNSILVVDGGDFVGTAAHLVQPRG 483
Query: 409 PRHRLDAGTFGTMGVGPGFAIAAAMWCRDYAPGNVSFVLKETLLLGFSGMEIETMFRYKL 588
P LD G FGT+GVG GFA+ A + CR P + L G+S +E +T R+K+
Sbjct: 484 PLRWLDPGAFGTLGVGAGFALGAKL-CR---PDAEVWCLFGDGAFGYSLIEFDTFVRHKI 539
Query: 589 P 591
P
Sbjct: 540 P 540
>AC004794-3|AAC18916.1| 393|Homo sapiens Acetolactate synthase
protein.
Length = 393
Score = 64.5 bits (150), Expect = 3e-10
Identities = 40/121 (33%), Positives = 62/121 (51%)
Frame = +1
Query: 229 ETETKSKHRFVEAQASSTAVPLNYYTVFKTVQQGIPKDSIIVSEGANTMDIGRGLLLNNH 408
E + + + F E A A LN V + V++ +P +SI+V +G + + L+
Sbjct: 185 EADRQKEQTFREKAAMPVAQHLNPVQVLQLVEETLPDNSILVVDGGDFVGTAAHLVQPRG 244
Query: 409 PRHRLDAGTFGTMGVGPGFAIAAAMWCRDYAPGNVSFVLKETLLLGFSGMEIETMFRYKL 588
P LD G FGT+GVG GFA+ A + CR P + L G+S +E +T R+K+
Sbjct: 245 PLRWLDPGAFGTLGVGAGFALGAKL-CR---PDAEVWCLFGDGAFGYSLIEFDTFVRHKI 300
Query: 589 P 591
P
Sbjct: 301 P 301
>AC003956-1|AAB94632.1| 632|Homo sapiens acetolactate synthase
protein.
Length = 632
Score = 64.5 bits (150), Expect = 3e-10
Identities = 40/121 (33%), Positives = 62/121 (51%)
Frame = +1
Query: 229 ETETKSKHRFVEAQASSTAVPLNYYTVFKTVQQGIPKDSIIVSEGANTMDIGRGLLLNNH 408
E + + + F E A A LN V + V++ +P +SI+V +G + + L+
Sbjct: 424 EADRQKEQTFREKAAMPVAQHLNPVQVLQLVEETLPDNSILVVDGGDFVGTAAHLVQPRG 483
Query: 409 PRHRLDAGTFGTMGVGPGFAIAAAMWCRDYAPGNVSFVLKETLLLGFSGMEIETMFRYKL 588
P LD G FGT+GVG GFA+ A + CR P + L G+S +E +T R+K+
Sbjct: 484 PLRWLDPGAFGTLGVGAGFALGAKL-CR---PDAEVWCLFGDGAFGYSLIEFDTFVRHKI 539
Query: 589 P 591
P
Sbjct: 540 P 540
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,036,360
Number of Sequences: 237096
Number of extensions: 2353821
Number of successful extensions: 9267
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9016
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9256
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -