Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0589
(698 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY058683-1|AAL13912.1| 568|Drosophila melanogaster LD40177p pro... 163 3e-40
AE013599-2972|AAF57501.1| 568|Drosophila melanogaster CG11208-P... 163 3e-40
AY113489-1|AAM29494.1| 427|Drosophila melanogaster RE47112p pro... 29 4.6
AE014134-1777|AAF52871.2| 413|Drosophila melanogaster CG5731-PA... 29 4.6
BT025217-1|ABF17908.1| 558|Drosophila melanogaster FI01024p pro... 29 8.0
AY119166-1|AAM51026.1| 610|Drosophila melanogaster RH29724p pro... 29 8.0
AY075263-1|AAL68130.1| 561|Drosophila melanogaster AT22518p pro... 29 8.0
AY070596-1|AAL48067.1| 461|Drosophila melanogaster RE69756p pro... 29 8.0
AJ245859-1|CAB64938.1| 558|Drosophila melanogaster putative DNA... 29 8.0
AE014134-1521|AAF52681.2| 558|Drosophila melanogaster CG9233-PA... 29 8.0
AE014134-1164|AAN10599.1| 561|Drosophila melanogaster CG17378-P... 29 8.0
AE014134-1163|AAF52436.2| 610|Drosophila melanogaster CG17378-P... 29 8.0
>AY058683-1|AAL13912.1| 568|Drosophila melanogaster LD40177p
protein.
Length = 568
Score = 163 bits (395), Expect = 3e-40
Identities = 77/135 (57%), Positives = 93/135 (68%)
Frame = +1
Query: 241 KSKHRFVEAQASSTAVPLNYYTVFKTVQQGIPKDSIIVSEGANTMDIGRGLLLNNHPRHR 420
K V+ + +T PLNYY VF +++ +PKD+IIVSEGANTMDIGR +LLN PRHR
Sbjct: 348 KQNRDTVQKMSLNTETPLNYYAVFHHLRELLPKDTIIVSEGANTMDIGRSMLLNEQPRHR 407
Query: 421 LDAGTFGTMGVGPGFAIAAAMWCRDYAPGNVSFVLKETLLLGFSGMEIETMFRYKLPXXX 600
LDAGTFGTMGVGPGFA+AAA++CRD+APG ++ GFSGMEIETM RYKLP
Sbjct: 408 LDAGTFGTMGVGPGFAVAAALFCRDFAPGKRVLCVEGDSAFGFSGMEIETMVRYKLPVTI 467
Query: 601 XXXXXXXXXXXFDKE 645
FDK+
Sbjct: 468 VIVNNNGIYGGFDKD 482
Score = 90.2 bits (214), Expect = 2e-18
Identities = 41/85 (48%), Positives = 57/85 (67%)
Frame = +2
Query: 2 LQARMNWMLHFGQPPRYAPDVKIIQVEISPEEFHNSKKSELAVHSDIRPFTEALVKRLSE 181
L AR+NW+LHFG+ PRY DVK IQV+I+PEE HNS + +A+ +DIRPF E L ++++
Sbjct: 269 LGARLNWILHFGKAPRYDKDVKFIQVDINPEELHNSVVASVAIQADIRPFAEQLFEQMNA 328
Query: 182 RKFSLQPQNNSWWQGLKQKQKANTD 256
F + + WW+ L K K N D
Sbjct: 329 VNFRFGYEQD-WWKQLAVKCKQNRD 352
>AE013599-2972|AAF57501.1| 568|Drosophila melanogaster CG11208-PA
protein.
Length = 568
Score = 163 bits (395), Expect = 3e-40
Identities = 77/135 (57%), Positives = 93/135 (68%)
Frame = +1
Query: 241 KSKHRFVEAQASSTAVPLNYYTVFKTVQQGIPKDSIIVSEGANTMDIGRGLLLNNHPRHR 420
K V+ + +T PLNYY VF +++ +PKD+IIVSEGANTMDIGR +LLN PRHR
Sbjct: 348 KQNRDTVQKMSLNTETPLNYYAVFHHLRELLPKDTIIVSEGANTMDIGRSMLLNEQPRHR 407
Query: 421 LDAGTFGTMGVGPGFAIAAAMWCRDYAPGNVSFVLKETLLLGFSGMEIETMFRYKLPXXX 600
LDAGTFGTMGVGPGFA+AAA++CRD+APG ++ GFSGMEIETM RYKLP
Sbjct: 408 LDAGTFGTMGVGPGFAVAAALFCRDFAPGKRVLCVEGDSAFGFSGMEIETMVRYKLPVTI 467
Query: 601 XXXXXXXXXXXFDKE 645
FDK+
Sbjct: 468 VIVNNNGIYGGFDKD 482
Score = 90.2 bits (214), Expect = 2e-18
Identities = 41/85 (48%), Positives = 57/85 (67%)
Frame = +2
Query: 2 LQARMNWMLHFGQPPRYAPDVKIIQVEISPEEFHNSKKSELAVHSDIRPFTEALVKRLSE 181
L AR+NW+LHFG+ PRY DVK IQV+I+PEE HNS + +A+ +DIRPF E L ++++
Sbjct: 269 LGARLNWILHFGKAPRYDKDVKFIQVDINPEELHNSVVASVAIQADIRPFAEQLFEQMNA 328
Query: 182 RKFSLQPQNNSWWQGLKQKQKANTD 256
F + + WW+ L K K N D
Sbjct: 329 VNFRFGYEQD-WWKQLAVKCKQNRD 352
>AY113489-1|AAM29494.1| 427|Drosophila melanogaster RE47112p
protein.
Length = 427
Score = 29.5 bits (63), Expect = 4.6
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 463 FAIAAAMWCRDYAPGNVSFVLKETLLLGFSGMEIETMF 576
+AIA D P ++S LKE L+ FSG +E ++
Sbjct: 340 YAIAFVNRRTDGTPSDISVTLKELGLINFSGYRVEDLY 377
>AE014134-1777|AAF52871.2| 413|Drosophila melanogaster CG5731-PA
protein.
Length = 413
Score = 29.5 bits (63), Expect = 4.6
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 463 FAIAAAMWCRDYAPGNVSFVLKETLLLGFSGMEIETMF 576
+AIA D P ++S LKE L+ FSG +E ++
Sbjct: 340 YAIAFVNRRTDGTPSDISVTLKELGLINFSGYRVEDLY 377
>BT025217-1|ABF17908.1| 558|Drosophila melanogaster FI01024p
protein.
Length = 558
Score = 28.7 bits (61), Expect = 8.0
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 35 GQPPRYAPDVKIIQVEISPEEFHNSKKSELAVHSD 139
G P + P+ I VE+ PE S + E A+ SD
Sbjct: 111 GNPGVFVPEEGCIIVEVDPENLAESSEEEFALGSD 145
>AY119166-1|AAM51026.1| 610|Drosophila melanogaster RH29724p
protein.
Length = 610
Score = 28.7 bits (61), Expect = 8.0
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = +1
Query: 385 RGLLLNNHPRHRLDAGTFGTMGVGPGFAIAAAMWCRDYAPGNV 513
R L H RLD+ TFG++ A+ C DY P V
Sbjct: 359 RFLTEQRHKSKRLDSVTFGSLAQYFALALFECSECEDYGPAAV 401
>AY075263-1|AAL68130.1| 561|Drosophila melanogaster AT22518p
protein.
Length = 561
Score = 28.7 bits (61), Expect = 8.0
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = +1
Query: 385 RGLLLNNHPRHRLDAGTFGTMGVGPGFAIAAAMWCRDYAPGNV 513
R L H RLD+ TFG++ A+ C DY P V
Sbjct: 310 RFLTEQRHKSKRLDSVTFGSLAQYFALALFECSECEDYGPAAV 352
>AY070596-1|AAL48067.1| 461|Drosophila melanogaster RE69756p
protein.
Length = 461
Score = 28.7 bits (61), Expect = 8.0
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 35 GQPPRYAPDVKIIQVEISPEEFHNSKKSELAVHSD 139
G P + P+ I VE+ PE S + E A+ SD
Sbjct: 14 GNPGVFVPEEGCIIVEVDPENLAESSEEEFALGSD 48
>AJ245859-1|CAB64938.1| 558|Drosophila melanogaster putative DNA
binding protein protein.
Length = 558
Score = 28.7 bits (61), Expect = 8.0
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 35 GQPPRYAPDVKIIQVEISPEEFHNSKKSELAVHSD 139
G P + P+ I VE+ PE S + E A+ SD
Sbjct: 111 GNPGVFVPEEGCIIVEVDPENLAESSEEEFALGSD 145
>AE014134-1521|AAF52681.2| 558|Drosophila melanogaster CG9233-PA
protein.
Length = 558
Score = 28.7 bits (61), Expect = 8.0
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 35 GQPPRYAPDVKIIQVEISPEEFHNSKKSELAVHSD 139
G P + P+ I VE+ PE S + E A+ SD
Sbjct: 111 GNPGVFVPEEGCIIVEVDPENLAESSEEEFALGSD 145
>AE014134-1164|AAN10599.1| 561|Drosophila melanogaster CG17378-PB,
isoform B protein.
Length = 561
Score = 28.7 bits (61), Expect = 8.0
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = +1
Query: 385 RGLLLNNHPRHRLDAGTFGTMGVGPGFAIAAAMWCRDYAPGNV 513
R L H RLD+ TFG++ A+ C DY P V
Sbjct: 310 RFLTEQRHKSKRLDSVTFGSLAQYFALALFECSECEDYGPAAV 352
>AE014134-1163|AAF52436.2| 610|Drosophila melanogaster CG17378-PA,
isoform A protein.
Length = 610
Score = 28.7 bits (61), Expect = 8.0
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = +1
Query: 385 RGLLLNNHPRHRLDAGTFGTMGVGPGFAIAAAMWCRDYAPGNV 513
R L H RLD+ TFG++ A+ C DY P V
Sbjct: 359 RFLTEQRHKSKRLDSVTFGSLAQYFALALFECSECEDYGPAAV 401
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,618,721
Number of Sequences: 53049
Number of extensions: 717307
Number of successful extensions: 2001
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1935
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1999
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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