Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0587
         (679 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    25   0.57 
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    25   0.57 
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    22   5.3  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    21   7.0  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   7.0  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   7.0  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   7.0  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   9.3  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   9.3  

>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 25.0 bits (52), Expect = 0.57
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = -1

Query: 622 NRKPRYCFHGQN*ARPVV-PYRRGLTRPSLPTS 527
           N K  +CFHG   A+P + P R    +P+ P S
Sbjct: 22  NNKAFFCFHGIPYAKPPIGPLRFKAPQPAEPWS 54


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 25.0 bits (52), Expect = 0.57
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = -1

Query: 622 NRKPRYCFHGQN*ARPVV-PYRRGLTRPSLPTS 527
           N K  +CFHG   A+P + P R    +P+ P S
Sbjct: 22  NNKAFFCFHGIPYAKPPIGPLRFKAPQPAEPWS 54


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +1

Query: 241 KNCKIKNTAGMLRCTIDNTLLYKIYTYIIN 330
           KN ++KNTA   +   ++  LY++   I N
Sbjct: 131 KNARVKNTALWKQLRYEHYRLYQLSVLIDN 160


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 612 RVTAFTARIRPGRWYPT 562
           +V   T R+RP + YPT
Sbjct: 75  KVHGTTVRVRPPKVYPT 91


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 612 RVTAFTARIRPGRWYPT 562
           +V   T R+RP + YPT
Sbjct: 389 KVHGTTVRVRPPKVYPT 405


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 612 RVTAFTARIRPGRWYPT 562
           +V   T R+RP + YPT
Sbjct: 622 KVHGTTVRVRPPKVYPT 638


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 612 RVTAFTARIRPGRWYPT 562
           +V   T R+RP + YPT
Sbjct: 622 KVHGTTVRVRPPKVYPT 638


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = -1

Query: 331 CLLYMYIFCIIMYCLW 284
           C+ Y Y   II+ C++
Sbjct: 284 CIYYFYCALIILLCIY 299


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/21 (38%), Positives = 9/21 (42%)
 Frame = -1

Query: 655 YKLPTGCPGPSNRKPRYCFHG 593
           YK     PGPS+     C  G
Sbjct: 121 YKYSAAAPGPSDPSVSSCHQG 141


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,211
Number of Sequences: 336
Number of extensions: 2678
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)