Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0586
(723 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67; Eukaryo... 169 5e-41
UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|R... 160 4e-38
UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107; Fungi/... 151 2e-35
UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57; Eukaryo... 115 1e-24
UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-gr... 103 3e-21
UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4... 96 7e-19
UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1; ... 95 1e-18
UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;... 92 1e-17
UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, wh... 84 3e-15
UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative; ... 80 5e-14
UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;... 78 3e-13
UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas ... 76 1e-12
UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1; Encephal... 75 2e-12
UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole gen... 74 3e-12
UniRef50_P93779 Cluster: 60S ribosomal protein L5; n=4; Spermato... 52 1e-05
UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1; Methan... 51 3e-05
UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951, ... 50 8e-05
UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31; Archa... 49 1e-04
UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2; environm... 47 4e-04
UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillard... 46 0.001
UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8; Euryar... 42 0.020
UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12; Archa... 41 0.027
UniRef50_UPI00005A2328 Cluster: PREDICTED: hypothetical protein ... 38 0.19
UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2; Methan... 37 0.44
UniRef50_Q4V5W2 Cluster: IP11866p; n=3; Drosophila melanogaster|... 37 0.58
UniRef50_Q7RWY4 Cluster: Putative uncharacterized protein NCU087... 34 3.1
UniRef50_Q9HIS6 Cluster: 50S ribosomal protein L18P; n=3; Thermo... 34 4.1
UniRef50_A7EZF0 Cluster: Predicted protein; n=1; Sclerotinia scl... 33 5.4
UniRef50_Q4R8L0 Cluster: Testis cDNA clone: QtsA-12228, similar ... 33 9.4
>UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67;
Eukaryota|Rep: 60S ribosomal protein L5 - Drosophila
melanogaster (Fruit fly)
Length = 299
Score = 169 bits (412), Expect = 5e-41
Identities = 89/159 (55%), Positives = 111/159 (69%), Gaps = 7/159 (4%)
Frame = +3
Query: 255 TDVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPG 434
T+VTG+E+NVEPVD+GPGAFRC+LDVGLARTTTGARVFGAMKGAVDGGLN+PHS+KRFPG
Sbjct: 123 TEVTGEEFNVEPVDDGPGAFRCFLDVGLARTTTGARVFGAMKGAVDGGLNIPHSVKRFPG 182
Query: 435 YDAESKKFNAEVHRAHIFGLHVAE**EVLNRMMRILSRDNSAST*N*ESLQMLL------ 596
Y AE+K FNA+VHRAHIFG HVA+ MR L ++ S S + L
Sbjct: 183 YSAETKSFNADVHRAHIFGQHVAD-------YMRSLEEEDEESFKRQFSRYIKLGIRADD 235
Query: 597 KPSTRKPMKPSVRIHPTRRKS*RKTLS-KQKRWNKRKLT 710
K ++R PT + + +K+ + +KRWN +KLT
Sbjct: 236 LEDIYKKAHQAIRNDPTHKVTAKKSSAVTKKRWNAKKLT 274
Score = 125 bits (302), Expect = 1e-27
Identities = 58/98 (59%), Positives = 71/98 (72%)
Frame = +1
Query: 10 RNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYS 189
+NKYNTPKYRLIVRLSNKD+T Q+AY+RIEGD +VCAAYSHELP+YG++VGLTNYAAAY
Sbjct: 41 KNKYNTPKYRLIVRLSNKDITVQIAYARIEGDRVVCAAYSHELPKYGIQVGLTNYAAAYC 100
Query: 190 TGXXXXXXXXXXXXXDTLYTGTQMSQVMNTMLNLSTMD 303
TG D+LY G ++V N+ +D
Sbjct: 101 TGLLVARRVLNKLGLDSLYAG--CTEVTGEEFNVEPVD 136
Score = 82.6 bits (195), Expect = 9e-15
Identities = 37/56 (66%), Positives = 46/56 (82%)
Frame = +2
Query: 509 MRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSV 676
MRSLE++DE+SFKRQFS+YIKLG+ AD +E IYKKAH+AIR DP+HK K +V
Sbjct: 208 MRSLEEEDEESFKRQFSRYIKLGIRADDLEDIYKKAHQAIRNDPTHKVTAKKSSAV 263
>UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|Rep:
Ribosomal protein L5e - Hister sp. APV-2005
Length = 268
Score = 160 bits (388), Expect = 4e-38
Identities = 72/84 (85%), Positives = 75/84 (89%)
Frame = +3
Query: 255 TDVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPG 434
TDV GDEYNVE V+NGPGAFRCYLDVGL RTTTGA VF AMKGAVDGGLN+PHS KRFPG
Sbjct: 92 TDVNGDEYNVESVENGPGAFRCYLDVGLNRTTTGACVFAAMKGAVDGGLNIPHSTKRFPG 151
Query: 435 YDAESKKFNAEVHRAHIFGLHVAE 506
YDAESK FNAE HRAHIFG HVA+
Sbjct: 152 YDAESKTFNAEAHRAHIFGQHVAD 175
Score = 100 bits (239), Expect = 4e-20
Identities = 42/49 (85%), Positives = 47/49 (95%)
Frame = +1
Query: 10 RNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVK 156
+NKYNTPKYRLIVR SN+D+TCQ+AYSRIEGD I+CAAYSHELPRYGVK
Sbjct: 41 KNKYNTPKYRLIVRFSNRDITCQIAYSRIEGDKILCAAYSHELPRYGVK 89
Score = 78.2 bits (184), Expect = 2e-13
Identities = 36/57 (63%), Positives = 45/57 (78%)
Frame = +2
Query: 509 MRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSVK 679
M +LE +D ++FKRQFS+YIKLG+ AD IE IYKKAH+AIRADPS KK E + + K
Sbjct: 177 MHALEDEDAEAFKRQFSQYIKLGIAADQIETIYKKAHDAIRADPSIKKVEKPEPAKK 233
>UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107;
Fungi/Metazoa group|Rep: 60S ribosomal protein L5 - Homo
sapiens (Human)
Length = 297
Score = 151 bits (365), Expect = 2e-35
Identities = 79/157 (50%), Positives = 103/157 (65%), Gaps = 5/157 (3%)
Frame = +3
Query: 258 DVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGY 437
+VTGDEYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGY
Sbjct: 124 EVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGY 183
Query: 438 DAESKKFNAEVHRAHIFGLHVAE**EVLNRMMRILSRDNSA-----ST*N*ESLQMLLKP 602
D+ESK+FNAEVHR HI G +VA+ M ++ D A S S+ +
Sbjct: 184 DSESKEFNAEVHRKHIMGQNVAD------YMRYLMEEDEDAYKKQFSQYIKNSVTPDMME 237
Query: 603 STRKPMKPSVRIHPTRRKS*RKTLSKQKRWNKRKLTI 713
K ++R +P K +K + K+KRWN+ K+++
Sbjct: 238 EMYKKAHAAIRENPVYEKKPKKEV-KKKRWNRPKMSL 273
Score = 120 bits (290), Expect = 3e-26
Identities = 55/98 (56%), Positives = 70/98 (71%)
Frame = +1
Query: 10 RNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYS 189
+NKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY
Sbjct: 41 KNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYC 100
Query: 190 TGXXXXXXXXXXXXXDTLYTGTQMSQVMNTMLNLSTMD 303
TG D +Y G +V N+ ++D
Sbjct: 101 TGLLLARRLLNRFGMDKIYEG--QVEVTGDEYNVESID 136
Score = 65.3 bits (152), Expect = 1e-09
Identities = 29/53 (54%), Positives = 41/53 (77%)
Frame = +2
Query: 509 MRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKK 667
MR L ++DED++K+QFS+YIK VT D +E +YKKAH AIR +P ++KK K+
Sbjct: 208 MRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENPVYEKKPKKE 260
>UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57;
Eukaryota|Rep: 60S ribosomal protein L5 - Caenorhabditis
elegans
Length = 293
Score = 115 bits (276), Expect = 1e-24
Identities = 52/81 (64%), Positives = 62/81 (76%)
Frame = +1
Query: 10 RNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYS 189
+NKYNTPKYRLIVR++NKDV Q+AYS+IEGD +V +AYSHELPRYG+KVGLTNYAAAY+
Sbjct: 41 KNKYNTPKYRLIVRITNKDVVAQLAYSKIEGDVVVASAYSHELPRYGLKVGLTNYAAAYA 100
Query: 190 TGXXXXXXXXXXXXXDTLYTG 252
TG D+ Y G
Sbjct: 101 TGLLLARRHLKTIGLDSTYKG 121
Score = 107 bits (258), Expect = 2e-22
Identities = 49/86 (56%), Positives = 63/86 (73%), Gaps = 1/86 (1%)
Frame = +3
Query: 252 HTDVTGDEYNVEPV-DNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 428
H ++TG++YNVE D P F+ LD+GLARTTTG+++F MKG DGG+NVPHS RF
Sbjct: 122 HEELTGEDYNVEEEGDRAP--FKAVLDIGLARTTTGSKIFAVMKGVADGGINVPHSESRF 179
Query: 429 PGYDAESKKFNAEVHRAHIFGLHVAE 506
G+D ESK++NAE HR I G HVA+
Sbjct: 180 FGFDQESKEYNAEAHRDRILGKHVAD 205
Score = 59.7 bits (138), Expect = 7e-08
Identities = 29/64 (45%), Positives = 40/64 (62%)
Frame = +2
Query: 509 MRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSVKTEA 688
M L+++DED +KRQFSK++ G+ AD + A Y+K H AIRAD S K+ K S + A
Sbjct: 207 MTYLKEEDEDRYKRQFSKFLAAGLNADNLVATYQKVHSAIRADASPAAKKAAKPSKRHTA 266
Query: 689 LEQT 700
T
Sbjct: 267 KRLT 270
>UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-green
alga; n=1; Ostreococcus tauri|Rep: T08009 probable
ribosomal protein L5-green alga - Ostreococcus tauri
Length = 331
Score = 103 bits (248), Expect = 3e-21
Identities = 41/62 (66%), Positives = 52/62 (83%)
Frame = +1
Query: 10 RNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYS 189
+NKYN+PKYR +VR +N+DV CQV Y+ + GD +CAAYSHELP+YG+K GLTNYAA Y+
Sbjct: 50 KNKYNSPKYRFVVRFTNRDVVCQVVYATLSGDVTICAAYSHELPKYGMKAGLTNYAATYA 109
Query: 190 TG 195
TG
Sbjct: 110 TG 111
Score = 93.9 bits (223), Expect = 4e-18
Identities = 43/84 (51%), Positives = 58/84 (69%)
Frame = +3
Query: 255 TDVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPG 434
T+ G++Y+VE D F+C+LD GL RT+TGARVF A+KGAVDGGL++PH+ KRF G
Sbjct: 132 TEDLGEDYHVEQGDEEARPFKCFLDTGLVRTSTGARVFAALKGAVDGGLDIPHNEKRFAG 191
Query: 435 YDAESKKFNAEVHRAHIFGLHVAE 506
YD + K + + +I G VAE
Sbjct: 192 YDLQDKSHDPDTLERYIKGGVVAE 215
Score = 40.3 bits (90), Expect = 0.047
Identities = 16/50 (32%), Positives = 31/50 (62%)
Frame = +2
Query: 518 LEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKK 667
+++++ + F++ F+KY+ +E ++ EAIR DP+H+KKE K
Sbjct: 220 MQEEEPEKFEQHFAKYLAEDFDPTELEDAMEEVFEAIREDPTHEKKERVK 269
>UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4;
Leishmania|Rep: 60S ribosomal protein L5, putative -
Leishmania major strain Friedlin
Length = 328
Score = 96.3 bits (229), Expect = 7e-19
Identities = 43/65 (66%), Positives = 50/65 (76%)
Frame = +3
Query: 312 FRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFG 491
F+ LDVGLARTTTGARVFG +KGAVDGG+ VPH RFPGY+ E +A+VHR IFG
Sbjct: 171 FKAILDVGLARTTTGARVFGVLKGAVDGGMAVPHRPNRFPGYNKEKSSLDAKVHRDRIFG 230
Query: 492 LHVAE 506
HVA+
Sbjct: 231 KHVAD 235
Score = 89.0 bits (211), Expect = 1e-16
Identities = 35/62 (56%), Positives = 51/62 (82%)
Frame = +1
Query: 10 RNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYS 189
+ K+ +PKYRL+VR++NKD+ Q+ ++I GD +V AAY+HELP +G++ GLTNYAAAY+
Sbjct: 64 KTKFGSPKYRLVVRITNKDIIAQIVQAKIVGDEVVMAAYAHELPAFGIEHGLTNYAAAYA 123
Query: 190 TG 195
TG
Sbjct: 124 TG 125
Score = 48.0 bits (109), Expect = 2e-04
Identities = 24/43 (55%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Frame = +2
Query: 551 QFSKYIKLGVTADAIEAIYKKAHEAIRADPSHK-KKELKKDSV 676
QFSKY+ V ++IE +YKKAH AIRADPS K+ KK+ V
Sbjct: 254 QFSKYMAAKVLPESIEGMYKKAHAAIRADPSKSLPKKAKKEGV 296
>UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1;
Theileria sp. CAAS-2005|Rep: Putative uncharacterized
protein - Theileria sp. CAAS-2005
Length = 255
Score = 95.5 bits (227), Expect = 1e-18
Identities = 45/85 (52%), Positives = 58/85 (68%), Gaps = 3/85 (3%)
Frame = +3
Query: 258 DVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGY 437
+V G+ Y+VE +N F+ LDVG+ TTG RVFGA+KGA DGGL+VPHS KRFPGY
Sbjct: 73 EVDGEVYHVEEEENERRPFKALLDVGVKNVTTGNRVFGALKGACDGGLHVPHSEKRFPGY 132
Query: 438 DAESKK---FNAEVHRAHIFGLHVA 503
+ + ++A+ HR IFG HVA
Sbjct: 133 SVDEENNGTYDAQAHRDRIFGAHVA 157
Score = 60.1 bits (139), Expect = 5e-08
Identities = 31/67 (46%), Positives = 38/67 (56%)
Frame = +1
Query: 52 LSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXX 231
++NK V CQV S + GD + +A S EL YGVKVGLTNYAAAY TG
Sbjct: 4 VTNKRVICQVVSSTLVGDKVHASADSAELVHYGVKVGLTNYAAAYCTGLLLARRLLTKLK 63
Query: 232 XDTLYTG 252
D+ + G
Sbjct: 64 LDSQFVG 70
Score = 48.4 bits (110), Expect = 2e-04
Identities = 22/55 (40%), Positives = 38/55 (69%), Gaps = 3/55 (5%)
Frame = +2
Query: 509 MRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRAD---PSHKKKELK 664
M L+++D + +++QFS Y+K G+ + A+E +Y KAHE IR + P+ K+E+K
Sbjct: 160 MEYLKEEDPERYRKQFSAYLKHGLESSALEDMYLKAHENIRKNPVRPTKPKREVK 214
>UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal L18p/L5e
family protein - Tetrahymena thermophila SB210
Length = 590
Score = 91.9 bits (218), Expect = 1e-17
Identities = 44/87 (50%), Positives = 54/87 (62%), Gaps = 5/87 (5%)
Frame = +3
Query: 255 TDVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPG 434
T V G +NV+ F+ LD GL RTTTG RVFG +KGA DGG+N+PHS RFPG
Sbjct: 412 TKVDGAYFNVDEDQKEKKPFKAILDAGLVRTTTGNRVFGVLKGACDGGINIPHSESRFPG 471
Query: 435 Y-----DAESKKFNAEVHRAHIFGLHV 500
Y + ES K+ E H+A IFG H+
Sbjct: 472 YVRASDEGESSKYKPEDHKARIFGKHI 498
Score = 84.2 bits (199), Expect = 3e-15
Identities = 36/81 (44%), Positives = 52/81 (64%)
Frame = +1
Query: 10 RNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYS 189
++KYNTPKYRL+ R +N + Q+ Y+ ++ D ++CAA S+EL R+GV GL +YAAAY+
Sbjct: 330 KDKYNTPKYRLVARATNTRIIAQIVYATLKCDRVLCAADSYELKRFGVSTGLASYAAAYA 389
Query: 190 TGXXXXXXXXXXXXXDTLYTG 252
TG DT+Y G
Sbjct: 390 TGLLLARRLLKQIGLDTVYAG 410
>UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_13,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 338
Score = 84.2 bits (199), Expect = 3e-15
Identities = 38/83 (45%), Positives = 52/83 (62%)
Frame = +1
Query: 10 RNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYS 189
++KYN+PKYR +VR +N + CQV Y+ ++GD +V AA S EL R+G+ GLTNYAAAY+
Sbjct: 41 KDKYNSPKYRFVVRHTNTKIICQVIYATLKGDKVVAAAESTELKRFGLTSGLTNYAAAYA 100
Query: 190 TGXXXXXXXXXXXXXDTLYTGTQ 258
TG D Y G +
Sbjct: 101 TGLLLARRTLKTLKMDKFYEGNK 123
Score = 78.2 bits (184), Expect = 2e-13
Identities = 33/66 (50%), Positives = 49/66 (74%), Gaps = 3/66 (4%)
Frame = +3
Query: 312 FRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAES---KKFNAEVHRAH 482
F LD+GL R+T G RVF A+KGA DGG+++PH+ +RFPG+ ++ +K++A VH+
Sbjct: 137 FFAVLDIGLVRSTLGNRVFAALKGAADGGIHIPHNNRRFPGFSVDNDKKEKYDANVHKDR 196
Query: 483 IFGLHV 500
IFG+HV
Sbjct: 197 IFGVHV 202
>UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative;
n=4; Plasmodium (Vinckeia)|Rep: Ribosomal protein family
L5, putative - Plasmodium berghei
Length = 314
Score = 80.2 bits (189), Expect = 5e-14
Identities = 39/83 (46%), Positives = 48/83 (57%)
Frame = +1
Query: 10 RNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYS 189
+NKYN K R IVR +N + CQ+A S IEGD I+ A S EL RYG+ VGL NYAAAY+
Sbjct: 41 KNKYNAQKLRFIVRKTNNQIICQIASSHIEGDKILSEAKSKELIRYGIPVGLKNYAAAYA 100
Query: 190 TGXXXXXXXXXXXXXDTLYTGTQ 258
TG D + G +
Sbjct: 101 TGLLCARRFLKSLNLDNQFIGVE 123
Score = 79.8 bits (188), Expect = 6e-14
Identities = 37/64 (57%), Positives = 45/64 (70%)
Frame = +3
Query: 315 RCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGL 494
+ +LDVG+ RTTTG RVF A+KGA DGGLN+PH RFPG +FN E R +I G+
Sbjct: 146 KAFLDVGITRTTTGNRVFAALKGACDGGLNIPHGNNRFPG---SKNEFNPEQLRKNILGI 202
Query: 495 HVAE 506
HVAE
Sbjct: 203 HVAE 206
Score = 45.6 bits (103), Expect = 0.001
Identities = 20/53 (37%), Positives = 32/53 (60%)
Frame = +2
Query: 509 MRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKK 667
M S++++D D +K F+ Y+K + + IE +Y AHE IR +P K K+ K
Sbjct: 208 MASMKEEDMDKYKAHFNDYLKHKIDENNIEKMYLTAHEKIRKNPEKKAKKAGK 260
>UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 161
Score = 77.8 bits (183), Expect = 3e-13
Identities = 36/58 (62%), Positives = 45/58 (77%)
Frame = +3
Query: 333 GLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAE 506
GLARTTTG +VFGA+K VD GL++PHS K FPGYD+ SK+FNAEV+ I G +V +
Sbjct: 71 GLARTTTGNKVFGALKEPVDCGLSIPHSTKCFPGYDSVSKEFNAEVYCKDIMGQNVVD 128
Score = 76.6 bits (180), Expect = 6e-13
Identities = 36/71 (50%), Positives = 45/71 (63%)
Frame = +1
Query: 40 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXX 219
+IV +N+ + CQ+AY+ E D IVCAAY+HELP+ GVKVGLTNYAAAY G
Sbjct: 1 MIVLATNRGIICQIAYAGNECDMIVCAAYAHELPKSGVKVGLTNYAAAYCIGLLLAHRLL 60
Query: 220 XXXXXDTLYTG 252
D +Y G
Sbjct: 61 NRFGMDKIYEG 71
>UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas
vaginalis|Rep: Ribosomal protein L5 - Trichomonas
vaginalis
Length = 308
Score = 75.8 bits (178), Expect = 1e-12
Identities = 31/62 (50%), Positives = 43/62 (69%)
Frame = +1
Query: 10 RNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYS 189
+ KY KYRL+ R++N V Q+ + + GD VC A S ELP+YG+K+GL+NY AAY+
Sbjct: 40 KTKYGAAKYRLVARITNTKVIAQIVVAELTGDKTVCQALSTELPKYGIKLGLSNYPAAYA 99
Query: 190 TG 195
TG
Sbjct: 100 TG 101
Score = 63.3 bits (147), Expect = 6e-09
Identities = 32/57 (56%), Positives = 42/57 (73%)
Frame = +3
Query: 255 TDVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKR 425
T++T +EY + + P F+ LDVGLARTTTGA+VF MKGAVDGGL +PH++ R
Sbjct: 120 TEIT-EEYLNDEENRRP--FKVILDVGLARTTTGAKVFAVMKGAVDGGLFIPHNVCR 173
Score = 60.1 bits (139), Expect = 5e-08
Identities = 23/45 (51%), Positives = 36/45 (80%)
Frame = +2
Query: 509 MRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPS 643
MR L+++ E+ + +QFS+Y+K G+TAD++E IYK AH AIR +P+
Sbjct: 214 MRKLKKESEEKYNKQFSRYVKAGITADSLEKIYKDAHAAIRKNPA 258
>UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L5 -
Encephalitozoon cuniculi
Length = 283
Score = 74.5 bits (175), Expect = 2e-12
Identities = 37/83 (44%), Positives = 53/83 (63%)
Frame = +3
Query: 258 DVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGY 437
++ G + +D A R +LD+GLAR+T GARVFGA+KGA D GLNVPHS +F G+
Sbjct: 117 EIDGTYSVTKDIDGEKKAPRVFLDIGLARSTRGARVFGALKGASDAGLNVPHSAAKFYGH 176
Query: 438 DAESKKFNAEVHRAHIFGLHVAE 506
+ F+A+ IFG +++E
Sbjct: 177 KPDG-SFDAKELHDRIFGYNISE 198
Score = 64.1 bits (149), Expect = 3e-09
Identities = 27/61 (44%), Positives = 41/61 (67%)
Frame = +1
Query: 13 NKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYST 192
N + K+RL+VR++ V CQ+ + ++GD ++ A S EL RYG+ G TNY+AAY+T
Sbjct: 36 NSCGSVKHRLVVRITGSRVICQIVAAYMDGDRVMVYADSRELERYGINFGATNYSAAYAT 95
Query: 193 G 195
G
Sbjct: 96 G 96
Score = 53.6 bits (123), Expect = 5e-06
Identities = 24/52 (46%), Positives = 31/52 (59%)
Frame = +2
Query: 509 MRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELK 664
M+ L D + +K QFS YIK G+ + I IYK A + I DP+ KKKE K
Sbjct: 200 MKQLRDGDPEKYKTQFSSYIKKGIDPEEIPRIYKSAFDKIAEDPTRKKKETK 251
>UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr16 scaffold_10, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 128
Score = 74.1 bits (174), Expect = 3e-12
Identities = 36/87 (41%), Positives = 56/87 (64%)
Frame = +3
Query: 273 EYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESK 452
+Y+VE NG F +L+VGL +T+ G VFG +K A+DG LN+PH+ +RF G ++K
Sbjct: 43 DYSVEST-NGKRPFYAFLNVGLVKTSIGNCVFGVLKEALDGSLNIPHNDRRFVGSSKDNK 101
Query: 453 KFNAEVHRAHIFGLHVAE**EVLNRMM 533
+ +A+VHR I+G +V+ E L +
Sbjct: 102 QLDAKVHRKSIYGGYVSAYIETLKTFL 128
>UniRef50_P93779 Cluster: 60S ribosomal protein L5; n=4;
Spermatophyta|Rep: 60S ribosomal protein L5 - Solanum
melongena (Eggplant) (Aubergine)
Length = 121
Score = 52.0 bits (119), Expect = 1e-05
Identities = 23/50 (46%), Positives = 31/50 (62%)
Frame = +2
Query: 509 MRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKE 658
M L +D+ + ++ FS YIK + D IE +YKK H AIR DPS KK +
Sbjct: 26 MNILMEDEPEKYQSHFSSYIKADLAPDNIEEMYKKVHAAIRPDPSPKKSQ 75
Score = 34.7 bits (76), Expect = 2.3
Identities = 25/89 (28%), Positives = 47/89 (52%)
Frame = +3
Query: 444 ESKKFNAEVHRAHIFGLHVAE**EVLNRMMRILSRDNSAST*N*ESLQMLLKPSTRKPMK 623
+SK+ +AEVHR +I+G HVA +L + + +S + ++ +K +
Sbjct: 4 DSKQLDAEVHRKYIYGGHVAAYMNILMEDEPEKYQSHFSSYIKADLAPDNIEEMYKK-VH 62
Query: 624 PSVRIHPTRRKS*RKTLSKQKRWNKRKLT 710
++R P+ +KS ++ KR+N +KLT
Sbjct: 63 AAIRPDPSPKKSQKQPPKTHKRYNLKKLT 91
>UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1;
Methanoculleus marisnigri JR1|Rep: Ribosomal protein
L18P/L5E - Methanoculleus marisnigri (strain ATCC 35101
/ DSM 1498 / JR1)
Length = 175
Score = 51.2 bits (117), Expect = 3e-05
Identities = 27/57 (47%), Positives = 36/57 (63%)
Frame = +3
Query: 261 VTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 431
+TG + V+ ++ G G LD+GLAR GARVF A+KGAVD GL+VP+ P
Sbjct: 84 LTGMLFAVKALNAGYG--EAILDIGLARAKPGARVFAALKGAVDAGLDVPYGESILP 138
Score = 45.6 bits (103), Expect = 0.001
Identities = 21/53 (39%), Positives = 31/53 (58%)
Frame = +1
Query: 37 RLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 195
R++VR +N+ + Q+ +EGD + AAYS EL YG + + AAY TG
Sbjct: 34 RMVVRKTNRQIIVQLVVPEVEGDSTLVAAYSAELAGYGYEGSTASTPAAYLTG 86
>UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_2951, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 117
Score = 49.6 bits (113), Expect = 8e-05
Identities = 19/32 (59%), Positives = 25/32 (78%)
Frame = +1
Query: 10 RNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGD 105
+NKYNTPKYR +VR +NKD+T Q+ + I GD
Sbjct: 52 KNKYNTPKYRFVVRFTNKDITAQIISASIAGD 83
>UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31;
Archaea|Rep: 50S ribosomal protein L18P - Aeropyrum
pernix
Length = 214
Score = 48.8 bits (111), Expect = 1e-04
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +3
Query: 306 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPG 434
G LDVGL + G+RVF A+KGA+D G+ +PHS + PG
Sbjct: 98 GVREAVLDVGLHKPVKGSRVFAALKGALDAGVEIPHSEEILPG 140
Score = 45.6 bits (103), Expect = 0.001
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = +1
Query: 31 KYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHEL-PRYGVKVGLTNYAAAYSTG 195
K R+ VR+SN+ + Q +RIEGD ++ AA+S EL ++G K N AAY TG
Sbjct: 32 KPRMAVRISNEYLWVQFLEARIEGDRVIAAAHSRELIKKFGWKGDGNNTCAAYLTG 87
>UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2;
environmental samples|Rep: Ribosomal protein L18/L5 -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 171
Score = 47.2 bits (107), Expect = 4e-04
Identities = 21/42 (50%), Positives = 26/42 (61%)
Frame = +3
Query: 306 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 431
G LDVGLA T+G RVF A++G VD GL++PH P
Sbjct: 100 GHSEAVLDVGLAAATSGNRVFAALRGMVDAGLDIPHGADVLP 141
>UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillardia
theta|Rep: 60S ribosomal protein L5 - Guillardia theta
(Cryptomonas phi)
Length = 232
Score = 45.6 bits (103), Expect = 0.001
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 4/58 (6%)
Frame = +3
Query: 324 LDVGLARTTTGARVFGAMKGAVDGGLNVPHS---IKRFPGYDAESKK-FNAEVHRAHI 485
+D+GL R T G + F +MKG+VD G+N+PH+ I + + +SK+ FN HI
Sbjct: 132 IDIGLKRATIGNKSFASMKGSVDSGINIPHNYNKIFKVKNNEIDSKELFNERSKGIHI 189
Score = 41.1 bits (92), Expect = 0.027
Identities = 18/62 (29%), Positives = 34/62 (54%)
Frame = +1
Query: 10 RNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYS 189
+ K+ K R+I+R S ++++ Q+ S ++GD I+ ++Y L + K NY +Y
Sbjct: 41 KKKFENKKKRIIIRFSKRNLSLQMVNSNVDGDFILLSSYLKNLSKLEYKNLTNNYPFSYL 100
Query: 190 TG 195
G
Sbjct: 101 LG 102
>UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8;
Euryarchaeota|Rep: 50S ribosomal protein L18P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 187
Score = 41.5 bits (93), Expect = 0.020
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +3
Query: 306 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHS 416
G LD+GL T G++VF +GA+D GL++PH+
Sbjct: 97 GVEEAVLDIGLNSPTPGSKVFAIQEGAIDAGLDIPHN 133
Score = 39.5 bits (88), Expect = 0.082
Identities = 21/55 (38%), Positives = 29/55 (52%)
Frame = +1
Query: 31 KYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 195
K RL+ R SNK V Q+ GD + +A+S +L YG + N +AY TG
Sbjct: 32 KPRLVARKSNKHVRAQLVTLGPNGDDTLASAHSSDLAEYGWEAPTGNMPSAYLTG 86
>UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12;
Archaea|Rep: 50S ribosomal protein L18P - Methanosarcina
mazei (Methanosarcina frisia)
Length = 174
Score = 41.1 bits (92), Expect = 0.027
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +3
Query: 324 LDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 431
LD+GL ++ G+RV+ A+KG VD G +P S FP
Sbjct: 103 LDIGLQASSAGSRVYAALKGIVDSGFEIPCSSDVFP 138
Score = 37.1 bits (82), Expect = 0.44
Identities = 21/53 (39%), Positives = 28/53 (52%)
Frame = +1
Query: 37 RLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 195
R++VR S ++V Q+ EGD +A S EL +YG N AAY TG
Sbjct: 34 RVVVRKSARNVQIQLLAPTPEGDITYSSAVSSELAKYGYTGATGNTTAAYLTG 86
>UniRef50_UPI00005A2328 Cluster: PREDICTED: hypothetical protein
XP_853470; n=1; Canis lupus familiaris|Rep: PREDICTED:
hypothetical protein XP_853470 - Canis familiaris
Length = 204
Score = 38.3 bits (85), Expect = 0.19
Identities = 27/89 (30%), Positives = 34/89 (38%)
Frame = -3
Query: 409 GTLRPPSTAPFIAPKTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSSPVTSVCQCIRCQV 230
GT R S A + +P R+P V P + PGP T P S Q R
Sbjct: 35 GTRRLASIAGYTSPTDRSPRVFLTGPRCRRRRERPGPPETSQRQDRGPAASALQTYRAPK 94
Query: 229 QVFEAVFVLIADQLNMLQHNLSDQPSHHN 143
Q EAV L + ++ PS HN
Sbjct: 95 QP-EAVKATSGAPLRQTPYKMAAAPSPHN 122
>UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2;
Methanobacteriaceae|Rep: 50S ribosomal protein L18P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 193
Score = 37.1 bits (82), Expect = 0.44
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +3
Query: 324 LDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 431
LD+G+ + G +++ +KGA+D GL +PH+ P
Sbjct: 103 LDIGVQPSIKGTKIYAVLKGALDAGLYIPHNDSILP 138
>UniRef50_Q4V5W2 Cluster: IP11866p; n=3; Drosophila
melanogaster|Rep: IP11866p - Drosophila melanogaster
(Fruit fly)
Length = 540
Score = 36.7 bits (81), Expect = 0.58
Identities = 30/110 (27%), Positives = 45/110 (40%)
Frame = -3
Query: 406 TLRPPSTAPFIAPKTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSSPVTSVCQCIRCQVQ 227
T RPP +AP P TR P R KP++K P+ST S + + +
Sbjct: 262 TPRPPPSAPSRPPTTRKPSAQRIKPSNK------CPISTKSQKLGGAKVLLEIILATKQH 315
Query: 226 VFEAVFVLIADQLNMLQHNLSDQPSHHNVATHVNKQRTQYGHLQSESRPP 77
+ L +L +L H+ D S ++V +T + E RPP
Sbjct: 316 ALSVLKNLNYLELELLSHSTDDDVSENHVKEKEPTTKTSERIEKPEPRPP 365
>UniRef50_Q7RWY4 Cluster: Putative uncharacterized protein
NCU08779.1; n=1; Neurospora crassa|Rep: Putative
uncharacterized protein NCU08779.1 - Neurospora crassa
Length = 864
Score = 34.3 bits (75), Expect = 3.1
Identities = 20/39 (51%), Positives = 22/39 (56%)
Frame = -3
Query: 385 APFIAPKTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSS 269
AP AP T AP AKP+S LN PG +TGS SS
Sbjct: 646 APAPAPSTAAPATTSAKPSS---LNIPGVSTTGSIASSS 681
>UniRef50_Q9HIS6 Cluster: 50S ribosomal protein L18P; n=3;
Thermoplasma|Rep: 50S ribosomal protein L18P -
Thermoplasma acidophilum
Length = 163
Score = 33.9 bits (74), Expect = 4.1
Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +1
Query: 37 RLIVRLSNKDVTCQVA-YSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 195
R IVR++ K V QVA YS I GD I+ L +YGV + N Y G
Sbjct: 29 RFIVRITGKGVIAQVAEYSDI-GDRILFTVTDKTLAKYGVDLRGNNIQVCYLVG 81
Score = 33.9 bits (74), Expect = 4.1
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +3
Query: 306 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 431
G LD G + G R+ +KG D G+ VPH FP
Sbjct: 92 GVESAVLDTGRRKFRKGGRIAACLKGFTDAGIEVPHGEDVFP 133
>UniRef50_A7EZF0 Cluster: Predicted protein; n=1; Sclerotinia
sclerotiorum 1980|Rep: Predicted protein - Sclerotinia
sclerotiorum 1980
Length = 238
Score = 33.5 bits (73), Expect = 5.4
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Frame = -2
Query: 527 PVQDFSLFSNMQTKDVSPVYFSI-ELF-GFCIIARESFDGMRNIEATVNSTLHSSKDTST 354
P +LF+N +TKDV P Y + ELF + A + ++ + NI T+ +++ ++ ST
Sbjct: 65 PAAATTLFANYKTKDVFPTYARLRELFHNYATEAHDHYEQVLNILGTLRASILATNTHST 124
Query: 353 S 351
+
Sbjct: 125 A 125
>UniRef50_Q4R8L0 Cluster: Testis cDNA clone: QtsA-12228, similar to
human SRY (sex determining region Y)-box 30
(SOX30),transcript variant 1,; n=3; Mammalia|Rep: Testis
cDNA clone: QtsA-12228, similar to human SRY (sex
determining region Y)-box 30 (SOX30),transcript variant
1, - Macaca fascicularis (Crab eating macaque)
(Cynomolgus monkey)
Length = 433
Score = 32.7 bits (71), Expect = 9.4
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = -3
Query: 406 TLRPPSTAPFIAPKTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSSP 266
T++PP ++P R+ + +A P H+ P PL +TL+ +P
Sbjct: 241 TIQPPKEYSSVSPCPRSAPIPQASPIPHPHVYQPPPLGHPATLFGTP 287
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 751,256,710
Number of Sequences: 1657284
Number of extensions: 15396540
Number of successful extensions: 42662
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 40625
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42602
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 58677691418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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