Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0586
(723 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5 va... 151 2e-36
U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5 prot... 151 3e-36
BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5 pr... 151 3e-36
BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5 pr... 151 3e-36
AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5 pr... 151 3e-36
BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5 pr... 150 4e-36
AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5 va... 149 1e-35
BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein. 111 3e-24
U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein prot... 101 3e-21
AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5 pr... 99 2e-20
BC033492-1|AAH33492.2| 753|Homo sapiens SRY (sex determining re... 32 1.8
AB022083-1|BAA37146.1| 753|Homo sapiens SOX30 protein protein. 32 1.8
L07810-1|AAA02806.1| 126|Homo sapiens dynamin protein. 31 3.2
L07809-1|AAA02805.1| 131|Homo sapiens dynamin protein. 31 3.2
L07807-1|AAA02803.1| 864|Homo sapiens dynamin protein. 31 3.2
BC063850-1|AAH63850.1| 851|Homo sapiens dynamin 1 protein. 31 3.2
AL590708-18|CAI13837.1| 864|Homo sapiens dynamin 1 protein. 31 3.2
AL590708-17|CAI13839.2| 851|Homo sapiens dynamin 1 protein. 31 3.2
AB061848-1|BAB79486.1| 62|Homo sapiens ribosomal protein L5 pr... 31 3.2
X76061-1|CAA53661.1| 1139|Homo sapiens 130K protein protein. 31 4.2
X74594-1|CAA52671.1| 1082|Homo sapiens Rb2/p130 protein protein. 31 4.2
S67171-1|AAB29227.1| 1139|Homo sapiens p130 protein. 31 4.2
BX537767-1|CAD97830.1| 849|Homo sapiens hypothetical protein pr... 31 4.2
BC034490-1|AAH34490.1| 1139|Homo sapiens retinoblastoma-like 2 (... 31 4.2
BC050279-1|AAH50279.2| 851|Homo sapiens dynamin 1 protein. 31 5.5
>AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5
variant protein.
Length = 303
Score = 151 bits (366), Expect = 2e-36
Identities = 79/159 (49%), Positives = 104/159 (65%), Gaps = 7/159 (4%)
Frame = +3
Query: 258 DVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGY 437
+VTGDEYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGY
Sbjct: 131 EVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGY 190
Query: 438 DAESKKFNAEVHRAHIFGLHVAE**EVLNRMMRILSRDNSAST*N*ESLQMLLKPSTRKP 617
D+ESK+FNAEVHR HI G +VA+ M ++ D A + +K S
Sbjct: 191 DSESKEFNAEVHRKHIMGQNVAD------YMRYLMEEDEDAYK---KQFSQYIKNSVTPD 241
Query: 618 MK-------PSVRIHPTRRKS*RKTLSKQKRWNKRKLTI 713
M+ ++R +P K +K + K+KRWN+ K+++
Sbjct: 242 MEEMYKKAHAAIRENPVYEKKPKKEV-KKKRWNRPKMSL 279
Score = 120 bits (290), Expect = 4e-27
Identities = 55/98 (56%), Positives = 70/98 (71%)
Frame = +1
Query: 10 RNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYS 189
+NKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY
Sbjct: 48 KNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYC 107
Query: 190 TGXXXXXXXXXXXXXDTLYTGTQMSQVMNTMLNLSTMD 303
TG D +Y G +V N+ ++D
Sbjct: 108 TGLLLARRLLNRFGMDKIYEG--QVEVTGDEYNVESID 143
>U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 151 bits (365), Expect = 3e-36
Identities = 79/157 (50%), Positives = 103/157 (65%), Gaps = 5/157 (3%)
Frame = +3
Query: 258 DVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGY 437
+VTGDEYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGY
Sbjct: 124 EVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGY 183
Query: 438 DAESKKFNAEVHRAHIFGLHVAE**EVLNRMMRILSRDNSA-----ST*N*ESLQMLLKP 602
D+ESK+FNAEVHR HI G +VA+ M ++ D A S S+ +
Sbjct: 184 DSESKEFNAEVHRKHIMGQNVAD------YMRYLMEEDEDAYKKQFSQYIKNSVTPDMME 237
Query: 603 STRKPMKPSVRIHPTRRKS*RKTLSKQKRWNKRKLTI 713
K ++R +P K +K + K+KRWN+ K+++
Sbjct: 238 EMYKKAHAAIRENPVYEKKPKKEV-KKKRWNRPKMSL 273
Score = 118 bits (285), Expect = 2e-26
Identities = 54/98 (55%), Positives = 69/98 (70%)
Frame = +1
Query: 10 RNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYS 189
+NKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCA Y+HELP+YGVKVGLTNYAAAY
Sbjct: 41 KNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCARYAHELPKYGVKVGLTNYAAAYC 100
Query: 190 TGXXXXXXXXXXXXXDTLYTGTQMSQVMNTMLNLSTMD 303
TG D +Y G +V N+ ++D
Sbjct: 101 TGLLLARRLLNRFGMDKIYEG--QVEVTGDEYNVESID 136
Score = 65.3 bits (152), Expect = 2e-10
Identities = 29/53 (54%), Positives = 41/53 (77%)
Frame = +2
Query: 509 MRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKK 667
MR L ++DED++K+QFS+YIK VT D +E +YKKAH AIR +P ++KK K+
Sbjct: 208 MRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENPVYEKKPKKE 260
>BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 151 bits (365), Expect = 3e-36
Identities = 79/157 (50%), Positives = 103/157 (65%), Gaps = 5/157 (3%)
Frame = +3
Query: 258 DVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGY 437
+VTGDEYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGY
Sbjct: 124 EVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGY 183
Query: 438 DAESKKFNAEVHRAHIFGLHVAE**EVLNRMMRILSRDNSA-----ST*N*ESLQMLLKP 602
D+ESK+FNAEVHR HI G +VA+ M ++ D A S S+ +
Sbjct: 184 DSESKEFNAEVHRKHIMGQNVAD------YMRYLMEEDEDAYKKQFSQYIKNSVTPDMME 237
Query: 603 STRKPMKPSVRIHPTRRKS*RKTLSKQKRWNKRKLTI 713
K ++R +P K +K + K+KRWN+ K+++
Sbjct: 238 EMYKKAHAAIRENPVYEKKPKKEV-KKKRWNRPKMSL 273
Score = 120 bits (290), Expect = 4e-27
Identities = 55/98 (56%), Positives = 70/98 (71%)
Frame = +1
Query: 10 RNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYS 189
+NKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY
Sbjct: 41 KNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYC 100
Query: 190 TGXXXXXXXXXXXXXDTLYTGTQMSQVMNTMLNLSTMD 303
TG D +Y G +V N+ ++D
Sbjct: 101 TGLLLARRLLNRFGMDKIYEG--QVEVTGDEYNVESID 136
Score = 65.3 bits (152), Expect = 2e-10
Identities = 29/53 (54%), Positives = 41/53 (77%)
Frame = +2
Query: 509 MRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKK 667
MR L ++DED++K+QFS+YIK VT D +E +YKKAH AIR +P ++KK K+
Sbjct: 208 MRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENPVYEKKPKKE 260
>BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 151 bits (365), Expect = 3e-36
Identities = 79/157 (50%), Positives = 103/157 (65%), Gaps = 5/157 (3%)
Frame = +3
Query: 258 DVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGY 437
+VTGDEYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGY
Sbjct: 124 EVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGY 183
Query: 438 DAESKKFNAEVHRAHIFGLHVAE**EVLNRMMRILSRDNSA-----ST*N*ESLQMLLKP 602
D+ESK+FNAEVHR HI G +VA+ M ++ D A S S+ +
Sbjct: 184 DSESKEFNAEVHRKHIMGQNVAD------YMRYLMEEDEDAYKKQFSQYIKNSVTPDMME 237
Query: 603 STRKPMKPSVRIHPTRRKS*RKTLSKQKRWNKRKLTI 713
K ++R +P K +K + K+KRWN+ K+++
Sbjct: 238 EMYKKAHAAIRENPVYEKKPKKEV-KKKRWNRPKMSL 273
Score = 120 bits (290), Expect = 4e-27
Identities = 55/98 (56%), Positives = 70/98 (71%)
Frame = +1
Query: 10 RNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYS 189
+NKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY
Sbjct: 41 KNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYC 100
Query: 190 TGXXXXXXXXXXXXXDTLYTGTQMSQVMNTMLNLSTMD 303
TG D +Y G +V N+ ++D
Sbjct: 101 TGLLLARRLLNRFGMDKIYEG--QVEVTGDEYNVESID 136
Score = 65.3 bits (152), Expect = 2e-10
Identities = 29/53 (54%), Positives = 41/53 (77%)
Frame = +2
Query: 509 MRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKK 667
MR L ++DED++K+QFS+YIK VT D +E +YKKAH AIR +P ++KK K+
Sbjct: 208 MRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENPVYEKKPKKE 260
>AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 151 bits (365), Expect = 3e-36
Identities = 79/157 (50%), Positives = 103/157 (65%), Gaps = 5/157 (3%)
Frame = +3
Query: 258 DVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGY 437
+VTGDEYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGY
Sbjct: 124 EVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGY 183
Query: 438 DAESKKFNAEVHRAHIFGLHVAE**EVLNRMMRILSRDNSA-----ST*N*ESLQMLLKP 602
D+ESK+FNAEVHR HI G +VA+ M ++ D A S S+ +
Sbjct: 184 DSESKEFNAEVHRKHIMGQNVAD------YMRYLMEEDEDAYKKQFSQYIKNSVTPDMME 237
Query: 603 STRKPMKPSVRIHPTRRKS*RKTLSKQKRWNKRKLTI 713
K ++R +P K +K + K+KRWN+ K+++
Sbjct: 238 EMYKKAHAAIRENPVYEKKPKKEV-KKKRWNRPKMSL 273
Score = 120 bits (290), Expect = 4e-27
Identities = 55/98 (56%), Positives = 70/98 (71%)
Frame = +1
Query: 10 RNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYS 189
+NKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY
Sbjct: 41 KNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYC 100
Query: 190 TGXXXXXXXXXXXXXDTLYTGTQMSQVMNTMLNLSTMD 303
TG D +Y G +V N+ ++D
Sbjct: 101 TGLLLARRLLNRFGMDKIYEG--QVEVTGDEYNVESID 136
Score = 65.3 bits (152), Expect = 2e-10
Identities = 29/53 (54%), Positives = 41/53 (77%)
Frame = +2
Query: 509 MRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKK 667
MR L ++DED++K+QFS+YIK VT D +E +YKKAH AIR +P ++KK K+
Sbjct: 208 MRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENPVYEKKPKKE 260
>BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 150 bits (364), Expect = 4e-36
Identities = 79/157 (50%), Positives = 103/157 (65%), Gaps = 5/157 (3%)
Frame = +3
Query: 258 DVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGY 437
+VTGDEYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGY
Sbjct: 124 EVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGY 183
Query: 438 DAESKKFNAEVHRAHIFGLHVAE**EVLNRMMRILSRDNSA-----ST*N*ESLQMLLKP 602
D+ESK+FNAEVHR HI G +VA+ M ++ D A S S+ +
Sbjct: 184 DSESKEFNAEVHRKHIMGQNVAD------YMRCLMEEDEDAYKKQFSQYIKNSVTPDMME 237
Query: 603 STRKPMKPSVRIHPTRRKS*RKTLSKQKRWNKRKLTI 713
K ++R +P K +K + K+KRWN+ K+++
Sbjct: 238 EMYKKAHAAIRENPVYEKKPKKEV-KKKRWNRPKMSL 273
Score = 120 bits (290), Expect = 4e-27
Identities = 55/98 (56%), Positives = 70/98 (71%)
Frame = +1
Query: 10 RNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYS 189
+NKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY
Sbjct: 41 KNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYC 100
Query: 190 TGXXXXXXXXXXXXXDTLYTGTQMSQVMNTMLNLSTMD 303
TG D +Y G +V N+ ++D
Sbjct: 101 TGLLLARRLLNRFGMDKIYEG--QVEVTGDEYNVESID 136
Score = 65.7 bits (153), Expect = 2e-10
Identities = 29/53 (54%), Positives = 41/53 (77%)
Frame = +2
Query: 509 MRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKK 667
MR L ++DED++K+QFS+YIK VT D +E +YKKAH AIR +P ++KK K+
Sbjct: 208 MRCLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENPVYEKKPKKE 260
>AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5
variant protein.
Length = 297
Score = 149 bits (361), Expect = 1e-35
Identities = 78/157 (49%), Positives = 103/157 (65%), Gaps = 5/157 (3%)
Frame = +3
Query: 258 DVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGY 437
+VTGDEYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGY
Sbjct: 124 EVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGY 183
Query: 438 DAESKKFNAEVHRAHIFGLHVAE**EVLNRMMRILSRDNSA-----ST*N*ESLQMLLKP 602
D+ESK+FNAEVHR HI G +VA+ M ++ D A S S+ +
Sbjct: 184 DSESKEFNAEVHRKHIMGQNVAD------YMRYLMEEDEDAYKKQFSQYIKNSVTPDMME 237
Query: 603 STRKPMKPSVRIHPTRRKS*RKTLSKQKRWNKRKLTI 713
K ++R +P K +K + K++RWN+ K+++
Sbjct: 238 EMYKKAHAAIRENPVYEKKPKKEV-KKERWNRPKMSL 273
Score = 120 bits (290), Expect = 4e-27
Identities = 55/98 (56%), Positives = 70/98 (71%)
Frame = +1
Query: 10 RNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYS 189
+NKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY
Sbjct: 41 KNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYC 100
Query: 190 TGXXXXXXXXXXXXXDTLYTGTQMSQVMNTMLNLSTMD 303
TG D +Y G +V N+ ++D
Sbjct: 101 TGLLLARRLLNRFGMDKIYEG--QVEVTGDEYNVESID 136
Score = 65.3 bits (152), Expect = 2e-10
Identities = 29/53 (54%), Positives = 41/53 (77%)
Frame = +2
Query: 509 MRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKK 667
MR L ++DED++K+QFS+YIK VT D +E +YKKAH AIR +P ++KK K+
Sbjct: 208 MRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENPVYEKKPKKE 260
>BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein.
Length = 101
Score = 111 bits (266), Expect = 3e-24
Identities = 46/58 (79%), Positives = 56/58 (96%)
Frame = +1
Query: 10 RNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAA 183
+NKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAA
Sbjct: 41 KNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAA 98
>U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein
protein.
Length = 145
Score = 101 bits (242), Expect = 3e-21
Identities = 57/128 (44%), Positives = 79/128 (61%), Gaps = 5/128 (3%)
Frame = +3
Query: 345 TTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAE**EVLN 524
TTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+
Sbjct: 1 TTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVAD------ 54
Query: 525 RMMRILSRDNSA-----ST*N*ESLQMLLKPSTRKPMKPSVRIHPTRRKS*RKTLSKQKR 689
M ++ D A S S+ + K ++R +P K +K + K+KR
Sbjct: 55 YMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENPVYEKKPKKEV-KKKR 113
Query: 690 WNKRKLTI 713
WN+ K+++
Sbjct: 114 WNRPKMSL 121
Score = 65.3 bits (152), Expect = 2e-10
Identities = 29/53 (54%), Positives = 41/53 (77%)
Frame = +2
Query: 509 MRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKK 667
MR L ++DED++K+QFS+YIK VT D +E +YKKAH AIR +P ++KK K+
Sbjct: 56 MRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENPVYEKKPKKE 108
>AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5
protein.
Length = 126
Score = 98.7 bits (235), Expect = 2e-20
Identities = 46/88 (52%), Positives = 60/88 (68%)
Frame = +1
Query: 40 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXX 219
+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 1 MIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLL 60
Query: 220 XXXXXDTLYTGTQMSQVMNTMLNLSTMD 303
D +Y G +V N+ ++D
Sbjct: 61 NRFGMDKIYEG--QVEVTGDEYNVESID 86
Score = 95.1 bits (226), Expect = 2e-19
Identities = 40/52 (76%), Positives = 46/52 (88%)
Frame = +3
Query: 258 DVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPH 413
+VTGDEYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PH
Sbjct: 74 EVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPH 125
>BC033492-1|AAH33492.2| 753|Homo sapiens SRY (sex determining
region Y)-box 30 protein.
Length = 753
Score = 32.3 bits (70), Expect = 1.8
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = -3
Query: 406 TLRPPSTAPFIAPKTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSSP 266
T++PP ++P R+ + +A P H+ P PL +TL+ +P
Sbjct: 561 TIQPPREYSSVSPCPRSAPIPQASPIPHPHVYQPPPLGHPATLFGTP 607
>AB022083-1|BAA37146.1| 753|Homo sapiens SOX30 protein protein.
Length = 753
Score = 32.3 bits (70), Expect = 1.8
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = -3
Query: 406 TLRPPSTAPFIAPKTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSSP 266
T++PP ++P R+ + +A P H+ P PL +TL+ +P
Sbjct: 561 TIQPPREYSSVSPCPRSAPIPQASPIPHPHVYQPPPLGHPATLFGTP 607
>L07810-1|AAA02806.1| 126|Homo sapiens dynamin protein.
Length = 126
Score = 31.5 bits (68), Expect = 3.2
Identities = 19/45 (42%), Positives = 26/45 (57%)
Frame = -3
Query: 400 RPPSTAPFIAPKTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSSP 266
R P+++P P+ RAP V A+P S+ APGP GS L +P
Sbjct: 48 RSPTSSP--TPQRRAPAVPPARPGSR--GPAPGPPPAGSALGGAP 88
>L07809-1|AAA02805.1| 131|Homo sapiens dynamin protein.
Length = 131
Score = 31.5 bits (68), Expect = 3.2
Identities = 19/45 (42%), Positives = 26/45 (57%)
Frame = -3
Query: 400 RPPSTAPFIAPKTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSSP 266
R P+++P P+ RAP V A+P S+ APGP GS L +P
Sbjct: 48 RSPTSSP--TPQRRAPAVPPARPGSR--GPAPGPPPAGSALGGAP 88
>L07807-1|AAA02803.1| 864|Homo sapiens dynamin protein.
Length = 864
Score = 31.5 bits (68), Expect = 3.2
Identities = 19/45 (42%), Positives = 26/45 (57%)
Frame = -3
Query: 400 RPPSTAPFIAPKTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSSP 266
R P+++P P+ RAP V A+P S+ APGP GS L +P
Sbjct: 773 RSPTSSP--TPQRRAPAVPPARPGSR--GPAPGPPPAGSALGGAP 813
>BC063850-1|AAH63850.1| 851|Homo sapiens dynamin 1 protein.
Length = 851
Score = 31.5 bits (68), Expect = 3.2
Identities = 19/45 (42%), Positives = 26/45 (57%)
Frame = -3
Query: 400 RPPSTAPFIAPKTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSSP 266
R P+++P P+ RAP V A+P S+ APGP GS L +P
Sbjct: 773 RSPTSSP--TPQRRAPAVPPARPGSR--GPAPGPPPAGSALGGAP 813
>AL590708-18|CAI13837.1| 864|Homo sapiens dynamin 1 protein.
Length = 864
Score = 31.5 bits (68), Expect = 3.2
Identities = 19/45 (42%), Positives = 26/45 (57%)
Frame = -3
Query: 400 RPPSTAPFIAPKTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSSP 266
R P+++P P+ RAP V A+P S+ APGP GS L +P
Sbjct: 773 RSPTSSP--TPQRRAPAVPPARPGSR--GPAPGPPPAGSALGGAP 813
>AL590708-17|CAI13839.2| 851|Homo sapiens dynamin 1 protein.
Length = 851
Score = 31.5 bits (68), Expect = 3.2
Identities = 19/45 (42%), Positives = 26/45 (57%)
Frame = -3
Query: 400 RPPSTAPFIAPKTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSSP 266
R P+++P P+ RAP V A+P S+ APGP GS L +P
Sbjct: 773 RSPTSSP--TPQRRAPAVPPARPGSR--GPAPGPPPAGSALGGAP 813
>AB061848-1|BAB79486.1| 62|Homo sapiens ribosomal protein L5
protein.
Length = 62
Score = 31.5 bits (68), Expect = 3.2
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +2
Query: 593 IEAIYKKAHEAIRADPSHKKKELKK 667
+E +YKKAH AIR +P ++KK K+
Sbjct: 1 MEEMYKKAHAAIRENPVYEKKPKKE 25
>X76061-1|CAA53661.1| 1139|Homo sapiens 130K protein protein.
Length = 1139
Score = 31.1 bits (67), Expect = 4.2
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -3
Query: 259 SVCQCIRCQVQVFEAVF--VLIADQLNMLQHNLSDQPSHHNVATHVNKQRT 113
++ +C R Q Q V+ VLI + SD SH N T +NK RT
Sbjct: 911 NIMRCYRTQPQARSQVYRSVLIKGKRKRRNSGSSDSRSHQNSPTELNKDRT 961
>X74594-1|CAA52671.1| 1082|Homo sapiens Rb2/p130 protein protein.
Length = 1082
Score = 31.1 bits (67), Expect = 4.2
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -3
Query: 259 SVCQCIRCQVQVFEAVF--VLIADQLNMLQHNLSDQPSHHNVATHVNKQRT 113
++ +C R Q Q V+ VLI + SD SH N T +NK RT
Sbjct: 854 NIMRCYRTQPQARSQVYRSVLIKGKRKRRNSGSSDSRSHQNSPTELNKDRT 904
>S67171-1|AAB29227.1| 1139|Homo sapiens p130 protein.
Length = 1139
Score = 31.1 bits (67), Expect = 4.2
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -3
Query: 259 SVCQCIRCQVQVFEAVF--VLIADQLNMLQHNLSDQPSHHNVATHVNKQRT 113
++ +C R Q Q V+ VLI + SD SH N T +NK RT
Sbjct: 911 NIMRCYRTQPQARSQVYRSVLIKGKRKRRNSGSSDSRSHQNSPTELNKDRT 961
>BX537767-1|CAD97830.1| 849|Homo sapiens hypothetical protein
protein.
Length = 849
Score = 31.1 bits (67), Expect = 4.2
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -3
Query: 259 SVCQCIRCQVQVFEAVF--VLIADQLNMLQHNLSDQPSHHNVATHVNKQRT 113
++ +C R Q Q V+ VLI + SD SH N T +NK RT
Sbjct: 621 NIMRCYRTQPQARSQVYRSVLIKGKRKRRNSGSSDSRSHQNSPTELNKDRT 671
>BC034490-1|AAH34490.1| 1139|Homo sapiens retinoblastoma-like 2 (p130)
protein.
Length = 1139
Score = 31.1 bits (67), Expect = 4.2
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -3
Query: 259 SVCQCIRCQVQVFEAVF--VLIADQLNMLQHNLSDQPSHHNVATHVNKQRT 113
++ +C R Q Q V+ VLI + SD SH N T +NK RT
Sbjct: 911 NIMRCYRTQPQARSQVYRSVLIKGKRKRRNSGSSDSRSHQNSPTELNKDRT 961
>BC050279-1|AAH50279.2| 851|Homo sapiens dynamin 1 protein.
Length = 851
Score = 30.7 bits (66), Expect = 5.5
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = -3
Query: 400 RPPSTAPFIAPKTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSSP 266
R P+++P P+ RAP V A+P S+ APGP GS + +P
Sbjct: 773 RSPTSSP--TPQRRAPAVPPARPGSR--GPAPGPPPAGSAMGGAP 813
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,420,081
Number of Sequences: 237096
Number of extensions: 2444842
Number of successful extensions: 5609
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 5262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5606
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8511181328
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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