Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0585
(714 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX640974-1|CAE45988.1| 899|Homo sapiens hypothetical protein pr... 32 1.8
AY184205-1|AAO27773.1| 668|Homo sapiens nesprin-2 beta 2 protein. 32 1.8
AY184204-1|AAO27772.1| 429|Homo sapiens nesprin-2 alpha 2 protein. 32 1.8
AY061759-1|AAL33802.1| 3270|Homo sapiens nesprin-2 gamma protein. 32 1.8
AY061758-1|AAL33801.1| 556|Homo sapiens nesprin-2 alpha protein. 32 1.8
AY061757-1|AAL33800.1| 763|Homo sapiens nesprin-2 beta protein. 32 1.8
AL080133-1|CAB45729.1| 1092|Homo sapiens hypothetical protein pr... 32 1.8
AK090430-1|BAC03411.1| 1752|Homo sapiens FLJ00347 protein protein. 32 1.8
AK074055-1|BAB84881.1| 878|Homo sapiens FLJ00126 protein protein. 32 1.8
AF495911-1|AAN60443.1| 6884|Homo sapiens nesprin-2 protein. 32 1.8
AF435011-1|AAL33548.1| 6885|Homo sapiens NUANCE protein. 32 1.8
AB023228-1|BAA76855.3| 3541|Homo sapiens KIAA1011 protein protein. 32 1.8
AK096324-1|BAC04763.1| 144|Homo sapiens protein ( Homo sapiens ... 32 2.3
BX538095-1|CAD98013.1| 1287|Homo sapiens hypothetical protein pr... 31 4.1
BC000102-1|AAH00102.1| 598|Homo sapiens COL4A3BP protein protein. 31 4.1
AY453386-1|AAR26718.1| 624|Homo sapiens lipid-transfer protein ... 31 4.1
AY453385-1|AAR26717.1| 598|Homo sapiens lipid-transfer protein ... 31 4.1
AK091851-1|BAC03762.1| 598|Homo sapiens protein ( Homo sapiens ... 31 4.1
AF232930-1|AAG42046.1| 598|Homo sapiens Goodpasture antigen-bin... 31 4.1
AF136450-1|AAD30288.1| 624|Homo sapiens goodpasture antigen-bin... 31 4.1
AB036936-1|BAB58977.1| 45|Homo sapiens Thr/Ser kinase protein. 31 4.1
U44799-1|AAA86655.1| 246|Homo sapiens U1-snRNP binding protein ... 30 9.5
U44798-1|AAA86654.1| 246|Homo sapiens U1-snRNP binding protein ... 30 9.5
BC113664-1|AAI13665.1| 1338|Homo sapiens centromere protein J pr... 30 9.5
BC113662-1|AAI13663.1| 1338|Homo sapiens centromere protein J pr... 30 9.5
BC113111-1|AAI13112.1| 1136|Homo sapiens CENPJ protein protein. 30 9.5
BC113110-1|AAI13111.1| 1338|Homo sapiens centromere protein J pr... 30 9.5
BC111955-1|AAI11956.1| 251|Homo sapiens U11/U12 snRNP 35K, isof... 30 9.5
BC093671-1|AAH93671.1| 251|Homo sapiens U11/U12 snRNP 35K protein. 30 9.5
BC054034-1|AAH54034.1| 246|Homo sapiens U11/U12 snRNP 35K protein. 30 9.5
BC047678-1|AAH47678.1| 251|Homo sapiens U11/U12 snRNP 35K protein. 30 9.5
BC009622-1|AAH09622.1| 251|Homo sapiens U11/U12 snRNP 35K protein. 30 9.5
AL354798-4|CAI16635.1| 1338|Homo sapiens centromere protein J pr... 30 9.5
AF139625-1|AAG21074.1| 1338|Homo sapiens centrosomal P4.1-associ... 30 9.5
>BX640974-1|CAE45988.1| 899|Homo sapiens hypothetical protein
protein.
Length = 899
Score = 32.3 bits (70), Expect = 1.8
Identities = 20/65 (30%), Positives = 35/65 (53%)
Frame = +1
Query: 34 VGGAKNPRQRHGYHPQKRRPLALVTHNVRTLRLDEKLVELEEEMDKLRWDVIGLSEIRRQ 213
+ AKN RQ+ K P AL+ ++L+++LVE + ++D L+ ++ I+
Sbjct: 692 LASAKNRRQKAHVTDPKADPRALLECRRELMQLEKELVERQPQVDMLQ-EISNSLLIKGH 750
Query: 214 GEDTI 228
GED I
Sbjct: 751 GEDCI 755
>AY184205-1|AAO27773.1| 668|Homo sapiens nesprin-2 beta 2 protein.
Length = 668
Score = 32.3 bits (70), Expect = 1.8
Identities = 20/65 (30%), Positives = 35/65 (53%)
Frame = +1
Query: 34 VGGAKNPRQRHGYHPQKRRPLALVTHNVRTLRLDEKLVELEEEMDKLRWDVIGLSEIRRQ 213
+ AKN RQ+ K P AL+ ++L+++LVE + ++D L+ ++ I+
Sbjct: 460 LASAKNRRQKAHVTDPKADPRALLECRRELMQLEKELVERQPQVDMLQ-EISNSLLIKGH 518
Query: 214 GEDTI 228
GED I
Sbjct: 519 GEDCI 523
>AY184204-1|AAO27772.1| 429|Homo sapiens nesprin-2 alpha 2 protein.
Length = 429
Score = 32.3 bits (70), Expect = 1.8
Identities = 20/65 (30%), Positives = 35/65 (53%)
Frame = +1
Query: 34 VGGAKNPRQRHGYHPQKRRPLALVTHNVRTLRLDEKLVELEEEMDKLRWDVIGLSEIRRQ 213
+ AKN RQ+ K P AL+ ++L+++LVE + ++D L+ ++ I+
Sbjct: 222 LASAKNRRQKAHVTDPKADPRALLECRRELMQLEKELVERQPQVDMLQ-EISNSLLIKGH 280
Query: 214 GEDTI 228
GED I
Sbjct: 281 GEDCI 285
>AY061759-1|AAL33802.1| 3270|Homo sapiens nesprin-2 gamma protein.
Length = 3270
Score = 32.3 bits (70), Expect = 1.8
Identities = 20/65 (30%), Positives = 35/65 (53%)
Frame = +1
Query: 34 VGGAKNPRQRHGYHPQKRRPLALVTHNVRTLRLDEKLVELEEEMDKLRWDVIGLSEIRRQ 213
+ AKN RQ+ K P AL+ ++L+++LVE + ++D L+ ++ I+
Sbjct: 3062 LASAKNRRQKAHVTDPKADPRALLECRRELMQLEKELVERQPQVDMLQ-EISNSLLIKGH 3120
Query: 214 GEDTI 228
GED I
Sbjct: 3121 GEDCI 3125
>AY061758-1|AAL33801.1| 556|Homo sapiens nesprin-2 alpha protein.
Length = 556
Score = 32.3 bits (70), Expect = 1.8
Identities = 20/65 (30%), Positives = 35/65 (53%)
Frame = +1
Query: 34 VGGAKNPRQRHGYHPQKRRPLALVTHNVRTLRLDEKLVELEEEMDKLRWDVIGLSEIRRQ 213
+ AKN RQ+ K P AL+ ++L+++LVE + ++D L+ ++ I+
Sbjct: 348 LASAKNRRQKAHVTDPKADPRALLECRRELMQLEKELVERQPQVDMLQ-EISNSLLIKGH 406
Query: 214 GEDTI 228
GED I
Sbjct: 407 GEDCI 411
>AY061757-1|AAL33800.1| 763|Homo sapiens nesprin-2 beta protein.
Length = 763
Score = 32.3 bits (70), Expect = 1.8
Identities = 20/65 (30%), Positives = 35/65 (53%)
Frame = +1
Query: 34 VGGAKNPRQRHGYHPQKRRPLALVTHNVRTLRLDEKLVELEEEMDKLRWDVIGLSEIRRQ 213
+ AKN RQ+ K P AL+ ++L+++LVE + ++D L+ ++ I+
Sbjct: 555 LASAKNRRQKAHVTDPKADPRALLECRRELMQLEKELVERQPQVDMLQ-EISNSLLIKGH 613
Query: 214 GEDTI 228
GED I
Sbjct: 614 GEDCI 618
>AL080133-1|CAB45729.1| 1092|Homo sapiens hypothetical protein
protein.
Length = 1092
Score = 32.3 bits (70), Expect = 1.8
Identities = 20/65 (30%), Positives = 35/65 (53%)
Frame = +1
Query: 34 VGGAKNPRQRHGYHPQKRRPLALVTHNVRTLRLDEKLVELEEEMDKLRWDVIGLSEIRRQ 213
+ AKN RQ+ K P AL+ ++L+++LVE + ++D L+ ++ I+
Sbjct: 884 LASAKNRRQKAHVTDPKADPRALLECRRELMQLEKELVERQPQVDMLQ-EISNSLLIKGH 942
Query: 214 GEDTI 228
GED I
Sbjct: 943 GEDCI 947
>AK090430-1|BAC03411.1| 1752|Homo sapiens FLJ00347 protein protein.
Length = 1752
Score = 32.3 bits (70), Expect = 1.8
Identities = 20/65 (30%), Positives = 35/65 (53%)
Frame = +1
Query: 34 VGGAKNPRQRHGYHPQKRRPLALVTHNVRTLRLDEKLVELEEEMDKLRWDVIGLSEIRRQ 213
+ AKN RQ+ K P AL+ ++L+++LVE + ++D L+ ++ I+
Sbjct: 1545 LASAKNRRQKAHVTDPKADPRALLECRRELMQLEKELVERQPQVDMLQ-EISNSLLIKGH 1603
Query: 214 GEDTI 228
GED I
Sbjct: 1604 GEDCI 1608
>AK074055-1|BAB84881.1| 878|Homo sapiens FLJ00126 protein protein.
Length = 878
Score = 32.3 bits (70), Expect = 1.8
Identities = 20/65 (30%), Positives = 35/65 (53%)
Frame = +1
Query: 34 VGGAKNPRQRHGYHPQKRRPLALVTHNVRTLRLDEKLVELEEEMDKLRWDVIGLSEIRRQ 213
+ AKN RQ+ K P AL+ ++L+++LVE + ++D L+ ++ I+
Sbjct: 670 LASAKNRRQKAHVTDPKADPRALLECRRELMQLEKELVERQPQVDMLQ-EISNSLLIKGH 728
Query: 214 GEDTI 228
GED I
Sbjct: 729 GEDCI 733
>AF495911-1|AAN60443.1| 6884|Homo sapiens nesprin-2 protein.
Length = 6884
Score = 32.3 bits (70), Expect = 1.8
Identities = 20/65 (30%), Positives = 35/65 (53%)
Frame = +1
Query: 34 VGGAKNPRQRHGYHPQKRRPLALVTHNVRTLRLDEKLVELEEEMDKLRWDVIGLSEIRRQ 213
+ AKN RQ+ K P AL+ ++L+++LVE + ++D L+ ++ I+
Sbjct: 6676 LASAKNRRQKAHVTDPKADPRALLECRRELMQLEKELVERQPQVDMLQ-EISNSLLIKGH 6734
Query: 214 GEDTI 228
GED I
Sbjct: 6735 GEDCI 6739
>AF435011-1|AAL33548.1| 6885|Homo sapiens NUANCE protein.
Length = 6885
Score = 32.3 bits (70), Expect = 1.8
Identities = 20/65 (30%), Positives = 35/65 (53%)
Frame = +1
Query: 34 VGGAKNPRQRHGYHPQKRRPLALVTHNVRTLRLDEKLVELEEEMDKLRWDVIGLSEIRRQ 213
+ AKN RQ+ K P AL+ ++L+++LVE + ++D L+ ++ I+
Sbjct: 6677 LASAKNRRQKAHVTDPKADPRALLECRRELMQLEKELVERQPQVDMLQ-EISNSLLIKGH 6735
Query: 214 GEDTI 228
GED I
Sbjct: 6736 GEDCI 6740
>AB023228-1|BAA76855.3| 3541|Homo sapiens KIAA1011 protein protein.
Length = 3541
Score = 32.3 bits (70), Expect = 1.8
Identities = 20/65 (30%), Positives = 35/65 (53%)
Frame = +1
Query: 34 VGGAKNPRQRHGYHPQKRRPLALVTHNVRTLRLDEKLVELEEEMDKLRWDVIGLSEIRRQ 213
+ AKN RQ+ K P AL+ ++L+++LVE + ++D L+ ++ I+
Sbjct: 3334 LASAKNRRQKAHVTDPKADPRALLECRRELMQLEKELVERQPQVDMLQ-EISNSLLIKGH 3392
Query: 214 GEDTI 228
GED I
Sbjct: 3393 GEDCI 3397
>AK096324-1|BAC04763.1| 144|Homo sapiens protein ( Homo sapiens
cDNA FLJ39005 fis, clone NT2RI2024496. ).
Length = 144
Score = 31.9 bits (69), Expect = 2.3
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +3
Query: 135 REACRVGRRDGQVALGRHWFIRNPKTGRG 221
R +C+VGRR G+ LGR W P+ G G
Sbjct: 73 RPSCKVGRRAGRQDLGRAWGAGPPEGGGG 101
>BX538095-1|CAD98013.1| 1287|Homo sapiens hypothetical protein
protein.
Length = 1287
Score = 31.1 bits (67), Expect = 4.1
Identities = 20/65 (30%), Positives = 34/65 (52%)
Frame = +1
Query: 34 VGGAKNPRQRHGYHPQKRRPLALVTHNVRTLRLDEKLVELEEEMDKLRWDVIGLSEIRRQ 213
+ AKN RQ+ K P AL+ ++L+++LVE + ++D L ++ I+
Sbjct: 1079 LASAKNRRQKAHVTDPKADPRALLECRRELMQLEKELVERQPQVDMLP-EISNSLLIKGH 1137
Query: 214 GEDTI 228
GED I
Sbjct: 1138 GEDCI 1142
>BC000102-1|AAH00102.1| 598|Homo sapiens COL4A3BP protein protein.
Length = 598
Score = 31.1 bits (67), Expect = 4.1
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +2
Query: 131 WTRSLSSWKKRWTSCAGTSLVYQKSED 211
WT + W+ RW +L Y KSED
Sbjct: 33 WTNYIHGWQDRWVVLKNNALSYYKSED 59
>AY453386-1|AAR26718.1| 624|Homo sapiens lipid-transfer protein
CERTL protein.
Length = 624
Score = 31.1 bits (67), Expect = 4.1
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +2
Query: 131 WTRSLSSWKKRWTSCAGTSLVYQKSED 211
WT + W+ RW +L Y KSED
Sbjct: 33 WTNYIHGWQDRWVVLKNNALSYYKSED 59
>AY453385-1|AAR26717.1| 598|Homo sapiens lipid-transfer protein
CERT protein.
Length = 598
Score = 31.1 bits (67), Expect = 4.1
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +2
Query: 131 WTRSLSSWKKRWTSCAGTSLVYQKSED 211
WT + W+ RW +L Y KSED
Sbjct: 33 WTNYIHGWQDRWVVLKNNALSYYKSED 59
>AK091851-1|BAC03762.1| 598|Homo sapiens protein ( Homo sapiens
cDNA FLJ34532 fis, clone HLUNG2008235, highly similar to
Homo sapiens goodpasture antigen-binding protein
(COL4A3BP) ).
Length = 598
Score = 31.1 bits (67), Expect = 4.1
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +2
Query: 131 WTRSLSSWKKRWTSCAGTSLVYQKSED 211
WT + W+ RW +L Y KSED
Sbjct: 33 WTNYIHGWQDRWVVLKNNALSYYKSED 59
>AF232930-1|AAG42046.1| 598|Homo sapiens Goodpasture
antigen-binding protein D26 protein.
Length = 598
Score = 31.1 bits (67), Expect = 4.1
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +2
Query: 131 WTRSLSSWKKRWTSCAGTSLVYQKSED 211
WT + W+ RW +L Y KSED
Sbjct: 33 WTNYIHGWQDRWVVLKNNALSYYKSED 59
>AF136450-1|AAD30288.1| 624|Homo sapiens goodpasture
antigen-binding protein protein.
Length = 624
Score = 31.1 bits (67), Expect = 4.1
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +2
Query: 131 WTRSLSSWKKRWTSCAGTSLVYQKSED 211
WT + W+ RW +L Y KSED
Sbjct: 33 WTNYIHGWQDRWVVLKNNALSYYKSED 59
>AB036936-1|BAB58977.1| 45|Homo sapiens Thr/Ser kinase protein.
Length = 45
Score = 31.1 bits (67), Expect = 4.1
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +2
Query: 131 WTRSLSSWKKRWTSCAGTSLVYQKSED 211
WT + W+ RW +L Y KSED
Sbjct: 1 WTNYIHGWQDRWVVLKNNALSYYKSED 27
>U44799-1|AAA86655.1| 246|Homo sapiens U1-snRNP binding protein
homolog protein.
Length = 246
Score = 29.9 bits (64), Expect = 9.5
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = +1
Query: 7 WIPRAAGGGVGGAKNPRQ-RHGYHPQK-RRPLAL 102
WIPR GGG+GG K Q R G + R+P+ L
Sbjct: 135 WIPRRLGGGLGGKKESGQLRFGGRDRPFRKPINL 168
>U44798-1|AAA86654.1| 246|Homo sapiens U1-snRNP binding protein
homolog protein.
Length = 246
Score = 29.9 bits (64), Expect = 9.5
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = +1
Query: 7 WIPRAAGGGVGGAKNPRQ-RHGYHPQK-RRPLAL 102
WIPR GGG+GG K Q R G + R+P+ L
Sbjct: 135 WIPRRLGGGLGGKKESGQLRFGGRDRPFRKPINL 168
>BC113664-1|AAI13665.1| 1338|Homo sapiens centromere protein J
protein.
Length = 1338
Score = 29.9 bits (64), Expect = 9.5
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = +1
Query: 112 NVRTLRLDEKLVELEEEMDKLRWDVIGLSEIRRQGEDTI 228
N R+ L EK++ELE E++K + + L+++R + E +
Sbjct: 900 NARSQVLREKIIELETEIEKFKAENASLAKLRIERESAL 938
>BC113662-1|AAI13663.1| 1338|Homo sapiens centromere protein J
protein.
Length = 1338
Score = 29.9 bits (64), Expect = 9.5
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = +1
Query: 112 NVRTLRLDEKLVELEEEMDKLRWDVIGLSEIRRQGEDTI 228
N R+ L EK++ELE E++K + + L+++R + E +
Sbjct: 900 NARSQVLREKIIELETEIEKFKAENASLAKLRIERESAL 938
>BC113111-1|AAI13112.1| 1136|Homo sapiens CENPJ protein protein.
Length = 1136
Score = 29.9 bits (64), Expect = 9.5
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = +1
Query: 112 NVRTLRLDEKLVELEEEMDKLRWDVIGLSEIRRQGEDTI 228
N R+ L EK++ELE E++K + + L+++R + E +
Sbjct: 900 NARSQVLREKIIELETEIEKFKAENASLAKLRIERESAL 938
>BC113110-1|AAI13111.1| 1338|Homo sapiens centromere protein J
protein.
Length = 1338
Score = 29.9 bits (64), Expect = 9.5
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = +1
Query: 112 NVRTLRLDEKLVELEEEMDKLRWDVIGLSEIRRQGEDTI 228
N R+ L EK++ELE E++K + + L+++R + E +
Sbjct: 900 NARSQVLREKIIELETEIEKFKAENASLAKLRIERESAL 938
>BC111955-1|AAI11956.1| 251|Homo sapiens U11/U12 snRNP 35K, isoform
b protein.
Length = 251
Score = 29.9 bits (64), Expect = 9.5
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = +1
Query: 7 WIPRAAGGGVGGAKNPRQ-RHGYHPQK-RRPLAL 102
WIPR GGG+GG K Q R G + R+P+ L
Sbjct: 140 WIPRRLGGGLGGKKESGQLRFGGRDRPFRKPINL 173
>BC093671-1|AAH93671.1| 251|Homo sapiens U11/U12 snRNP 35K protein.
Length = 251
Score = 29.9 bits (64), Expect = 9.5
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = +1
Query: 7 WIPRAAGGGVGGAKNPRQ-RHGYHPQK-RRPLAL 102
WIPR GGG+GG K Q R G + R+P+ L
Sbjct: 140 WIPRRLGGGLGGKKESGQLRFGGRDRPFRKPINL 173
>BC054034-1|AAH54034.1| 246|Homo sapiens U11/U12 snRNP 35K protein.
Length = 246
Score = 29.9 bits (64), Expect = 9.5
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = +1
Query: 7 WIPRAAGGGVGGAKNPRQ-RHGYHPQK-RRPLAL 102
WIPR GGG+GG K Q R G + R+P+ L
Sbjct: 135 WIPRRLGGGLGGKKESGQLRFGGRDRPFRKPINL 168
>BC047678-1|AAH47678.1| 251|Homo sapiens U11/U12 snRNP 35K protein.
Length = 251
Score = 29.9 bits (64), Expect = 9.5
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = +1
Query: 7 WIPRAAGGGVGGAKNPRQ-RHGYHPQK-RRPLAL 102
WIPR GGG+GG K Q R G + R+P+ L
Sbjct: 140 WIPRRLGGGLGGKKESGQLRFGGRDRPFRKPINL 173
>BC009622-1|AAH09622.1| 251|Homo sapiens U11/U12 snRNP 35K protein.
Length = 251
Score = 29.9 bits (64), Expect = 9.5
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = +1
Query: 7 WIPRAAGGGVGGAKNPRQ-RHGYHPQK-RRPLAL 102
WIPR GGG+GG K Q R G + R+P+ L
Sbjct: 140 WIPRRLGGGLGGKKESGQLRFGGRDRPFRKPINL 173
>AL354798-4|CAI16635.1| 1338|Homo sapiens centromere protein J
protein.
Length = 1338
Score = 29.9 bits (64), Expect = 9.5
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = +1
Query: 112 NVRTLRLDEKLVELEEEMDKLRWDVIGLSEIRRQGEDTI 228
N R+ L EK++ELE E++K + + L+++R + E +
Sbjct: 900 NARSQVLREKIIELETEIEKFKAENASLAKLRIERESAL 938
>AF139625-1|AAG21074.1| 1338|Homo sapiens centrosomal P4.1-associated
protein protein.
Length = 1338
Score = 29.9 bits (64), Expect = 9.5
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = +1
Query: 112 NVRTLRLDEKLVELEEEMDKLRWDVIGLSEIRRQGEDTI 228
N R+ L EK++ELE E++K + + L+++R + E +
Sbjct: 900 NARSQVLREKIIELETEIEKFKAENASLAKLRIERESAL 938
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,388,848
Number of Sequences: 237096
Number of extensions: 2905407
Number of successful extensions: 11975
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 11431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11947
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8343197486
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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