Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0584
         (698 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146732-1|AAO12092.1|  327|Anopheles gambiae odorant-binding pr...    26   1.3  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   4.0  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   4.0  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    24   5.3  
Z49813-1|CAA89967.1|  247|Anopheles gambiae serine proteinase pr...    23   9.2  

>AY146732-1|AAO12092.1|  327|Anopheles gambiae odorant-binding
           protein AgamOBP44 protein.
          Length = 327

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = -1

Query: 251 SRNNCS*VVRVPSEALGQLLANPTP 177
           S ++C+  +++P E LGQ +AN  P
Sbjct: 36  SVHDCTEYLQIPKERLGQYMANEFP 60


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = +3

Query: 198  LPERLRRXPNNSRAIVSRMIYYRIGIATR*EDP 296
            LP+R+   PN+  A      Y   G  TR EDP
Sbjct: 2077 LPKRVLIQPNSRHAYQRTYHYNEPGYLTRIEDP 2109


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = +3

Query: 198  LPERLRRXPNNSRAIVSRMIYYRIGIATR*EDP 296
            LP+R+   PN+  A      Y   G  TR EDP
Sbjct: 2078 LPKRVLIQPNSRHAYQRTYHYNEPGYLTRIEDP 2110


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +2

Query: 119 GPKAFPVSPGQVGEQRLSQEGWDL 190
           G K F   PG++GE+ L  E  D+
Sbjct: 421 GEKGFKGEPGRIGERGLMGEKGDM 444


>Z49813-1|CAA89967.1|  247|Anopheles gambiae serine proteinase
           protein.
          Length = 247

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -3

Query: 666 CRLAVGAPWFVRNVDLHDDLGLES 595
           C+   G P  VRN D H+ +G+ S
Sbjct: 188 CQGDSGGPLLVRNGDKHEIVGIVS 211


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 670,262
Number of Sequences: 2352
Number of extensions: 12507
Number of successful extensions: 20
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)