Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0582
         (697 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    38   0.24 
UniRef50_Q7R2I3 Cluster: GLP_623_14514_19574; n=1; Giardia lambl...    33   5.1  
UniRef50_UPI00006601FC Cluster: potassium voltage-gated channel,...    33   8.8  
UniRef50_A7HJQ7 Cluster: Putative uncharacterized protein; n=1; ...    33   8.8  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 37.9 bits (84), Expect = 0.24
 Identities = 16/22 (72%), Positives = 18/22 (81%)
 Frame = -3

Query: 455 FSLPECVDDLTAHLVLSGYWNP 390
           F L   VD+LTAHLVLSGYW+P
Sbjct: 154 FLLLRWVDELTAHLVLSGYWSP 175


>UniRef50_Q7R2I3 Cluster: GLP_623_14514_19574; n=1; Giardia lamblia
           ATCC 50803|Rep: GLP_623_14514_19574 - Giardia lamblia
           ATCC 50803
          Length = 1686

 Score = 33.5 bits (73), Expect = 5.1
 Identities = 11/32 (34%), Positives = 23/32 (71%)
 Frame = +1

Query: 115 WSRDKFVKNLCYRYQISEINVRFLLYTYIYFN 210
           W  ++++K+L Y ++++   VR + +TYIYF+
Sbjct: 499 WDLERYIKSLSYLFEVTITLVRQIRHTYIYFH 530


>UniRef50_UPI00006601FC Cluster: potassium voltage-gated channel,
           shaker-related subfamily, member 7; n=2;
           Deuterostomia|Rep: potassium voltage-gated channel,
           shaker-related subfamily, member 7 - Takifugu rubripes
          Length = 428

 Score = 32.7 bits (71), Expect = 8.8
 Identities = 8/22 (36%), Positives = 18/22 (81%)
 Frame = +3

Query: 456 KNLCVCFFCYEIIIRMQISPNR 521
           + +C+C+FC+E+++R   SP++
Sbjct: 225 ETICICWFCFELLVRFLCSPSK 246


>UniRef50_A7HJQ7 Cluster: Putative uncharacterized protein; n=1;
           Fervidobacterium nodosum Rt17-B1|Rep: Putative
           uncharacterized protein - Fervidobacterium nodosum
           Rt17-B1
          Length = 250

 Score = 32.7 bits (71), Expect = 8.8
 Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
 Frame = -3

Query: 308 DRVPTLGGRGF-----EFRQRKILYDKYKCLFQGYGCILKYMYVYNKNLTF--ISDIWYL 150
           D V  +G  GF     E  + K L   ++    G+ CI   ++ YNKN  +  +S +W  
Sbjct: 8   DIVHYIGAIGFFKSIDEIEENKRLSGDFEIYCSGFSCIPALLWYYNKNSAYNTLSKMWNE 67

Query: 149 *HRFFTNLSRDQL 111
             + F N S++ L
Sbjct: 68  LPKIFPNASKNSL 80


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 696,091,314
Number of Sequences: 1657284
Number of extensions: 14452355
Number of successful extensions: 27139
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 26163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27130
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54958682807
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)