Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0582
         (697 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY779768-1|AAX11186.1|  456|Homo sapiens voltage-dependent potas...    30   9.1  
AJ310479-1|CAC29065.1|  456|Homo sapiens potassium voltage-gated...    30   9.1  
AF315818-1|AAK63002.1|  456|Homo sapiens voltage-gated potassium...    30   9.1  

>AY779768-1|AAX11186.1|  456|Homo sapiens voltage-dependent
           potassium channel Kv1.7 protein.
          Length = 456

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 7/22 (31%), Positives = 18/22 (81%)
 Frame = +3

Query: 456 KNLCVCFFCYEIIIRMQISPNR 521
           + LC+C+F +E+++R+ + P++
Sbjct: 213 ETLCICWFSFELLVRLLVCPSK 234


>AJ310479-1|CAC29065.1|  456|Homo sapiens potassium voltage-gated
           channel, shaker-related subfamily, member 7 protein.
          Length = 456

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 7/22 (31%), Positives = 18/22 (81%)
 Frame = +3

Query: 456 KNLCVCFFCYEIIIRMQISPNR 521
           + LC+C+F +E+++R+ + P++
Sbjct: 213 ETLCICWFSFELLVRLLVCPSK 234


>AF315818-1|AAK63002.1|  456|Homo sapiens voltage-gated potassium
           channel KCNA7 protein.
          Length = 456

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 7/22 (31%), Positives = 18/22 (81%)
 Frame = +3

Query: 456 KNLCVCFFCYEIIIRMQISPNR 521
           + LC+C+F +E+++R+ + P++
Sbjct: 213 ETLCICWFSFELLVRLLVCPSK 234


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,791,764
Number of Sequences: 237096
Number of extensions: 2157306
Number of successful extensions: 2817
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2817
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8007229802
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)