Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0582
         (697 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g34220.1 68415.m04187 hypothetical protein contains Pfam prof...    28   5.1  
At5g55380.1 68418.m06900 membrane bound O-acyl transferase (MBOA...    28   6.8  

>At2g34220.1 68415.m04187 hypothetical protein contains Pfam
           profiles PF04780: Protein of unknown function (DUF629),
           PF04781: Protein of unknown function (DUF627)
          Length = 718

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -3

Query: 458 FFSLPECVDDLTAHLVLSGYWNP 390
           F + P+CVD++ A ++  G W P
Sbjct: 279 FSARPKCVDEILADMICCGDWKP 301


>At5g55380.1 68418.m06900 membrane bound O-acyl transferase (MBOAT)
           family protein / wax synthase-related  similar to wax
           synthase [gi:5020219] from Simmondsia chinensis
          Length = 341

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
 Frame = +3

Query: 468 VCFFCYEIIIRMQISPNRVTHDSQKFLP-----VTLDRSPLNSHVYLYFIGLFQFPVR*I 632
           +CF C  I IR   SPN + +   K +P     V +    +  HVY Y  GL +F V  +
Sbjct: 95  ICFACLPIKIRQDPSPNAIPNLHPKPMPKWVLAVKILVLGVLLHVYEYRDGLPRFVVLAL 154

Query: 633 NC 638
            C
Sbjct: 155 YC 156


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,049,057
Number of Sequences: 28952
Number of extensions: 314737
Number of successful extensions: 581
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 581
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1487069504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)