Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0581
(694 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 97 4e-19
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 95 2e-18
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 92 1e-17
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 86 9e-16
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 85 2e-15
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 85 2e-15
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 82 1e-14
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 82 1e-14
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 82 1e-14
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 81 3e-14
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 81 3e-14
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 81 3e-14
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 79 8e-14
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 78 2e-13
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 76 1e-12
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 75 1e-12
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 75 2e-12
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 74 3e-12
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 74 4e-12
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 73 7e-12
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 72 1e-11
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 72 1e-11
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 71 2e-11
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 70 5e-11
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 69 8e-11
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 69 1e-10
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 68 2e-10
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 67 4e-10
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 66 8e-10
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 66 8e-10
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 66 8e-10
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 65 1e-09
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 65 2e-09
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 63 5e-09
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 63 5e-09
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 61 3e-08
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 60 4e-08
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 60 5e-08
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 60 7e-08
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 59 9e-08
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 58 2e-07
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 57 4e-07
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 57 4e-07
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 55 1e-06
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 55 2e-06
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 55 2e-06
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 54 3e-06
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 54 3e-06
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 53 6e-06
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 53 6e-06
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 53 8e-06
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 53 8e-06
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 51 2e-05
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 50 7e-05
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 49 9e-05
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 49 1e-04
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 48 2e-04
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 48 2e-04
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 48 2e-04
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 48 2e-04
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 48 2e-04
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 48 2e-04
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 48 2e-04
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 48 3e-04
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 47 4e-04
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 47 5e-04
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 47 5e-04
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 45 0.002
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 45 0.002
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 45 0.002
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 45 0.002
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 45 0.002
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 44 0.003
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 44 0.005
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 43 0.006
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 43 0.008
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 43 0.008
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 43 0.008
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 43 0.008
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 42 0.011
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 42 0.019
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 41 0.025
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 40 0.044
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 40 0.044
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 40 0.058
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 40 0.076
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 38 0.18
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 36 0.71
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 36 1.2
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 36 1.2
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 35 2.2
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 34 2.9
UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach... 34 3.8
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 33 5.0
UniRef50_Q5ABE2 Cluster: Putative uncharacterized protein CLN3; ... 33 6.6
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 97.1 bits (231), Expect = 4e-19
Identities = 52/93 (55%), Positives = 60/93 (64%)
Frame = -2
Query: 285 KGGG*ESKSYIFIRGNAISGAPSIRGTNQFPNPPXXXXXXXXXXXXKACAVTIVL*I*SS 106
K GG +FIRGNA+SGAP++ GTNQFPNPP KA AVT+ L I S
Sbjct: 126 KEGGSNQNLMLFIRGNAMSGAPNMSGTNQFPNPPIMIGMTMKKIITKAWAVTMTL-IWSF 184
Query: 105 PINDPGFPNSARIKSLKDVPIIPDQIPKIKYNL 7
PI PG PNSARIKSL DVP +P PK+KYN+
Sbjct: 185 PIKLPGCPNSARIKSLSDVPTMPAHAPKMKYNV 217
Score = 76.2 bits (179), Expect = 7e-13
Identities = 37/62 (59%), Positives = 45/62 (72%)
Frame = -3
Query: 428 DEIPAKCSEKIARSTDLPLCAILDESGG*TVHPVPAPFSTILLEINNIREGGRSQNLIYL 249
+E PAKC+EKI STD P CAI SGG TVHPVP P STI L + ++EGG +QNL+ L
Sbjct: 78 EETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLSTIPLNKSKVKEGGSNQNLM-L 136
Query: 248 FV 243
F+
Sbjct: 137 FI 138
Score = 72.1 bits (169), Expect = 1e-11
Identities = 35/51 (68%), Positives = 41/51 (80%)
Frame = -1
Query: 661 NKC*YKIGSPPPAGSKNDVFKFRSVNNIVIAPAKTGSDNNNKNAVIPTAHT 509
NKC + IGSPPPAGSK +VFKFRSV +IVIAPA TGS++N+K AV T T
Sbjct: 1 NKC-WSIGSPPPAGSKKEVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQT 50
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 94.7 bits (225), Expect = 2e-18
Identities = 44/59 (74%), Positives = 47/59 (79%)
Frame = +3
Query: 516 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPGSLY 692
AVGITAF AGAIT+LLTDRNLNTSFFDPAGGGDPILYQHLF FFGHP ++
Sbjct: 184 AVGITAFLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPKLMF 242
Score = 83.8 bits (198), Expect = 4e-15
Identities = 44/67 (65%), Positives = 45/67 (67%)
Frame = +1
Query: 307 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 486
IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAGISS
Sbjct: 114 IVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINMRMNNL 173
Query: 487 SFDQLPL 507
SFDQ+PL
Sbjct: 174 SFDQMPL 180
Score = 80.2 bits (189), Expect = 4e-14
Identities = 42/71 (59%), Positives = 45/71 (63%)
Frame = +2
Query: 74 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 253
AELG PGSLIGDDQIYNTIVTAHA N LVPL+LGAPD+AFPR+N
Sbjct: 36 AELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMN 95
Query: 254 I*DFDSYPPPL 286
F PP L
Sbjct: 96 NMSFWLLPPSL 106
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 91.9 bits (218), Expect = 1e-17
Identities = 43/55 (78%), Positives = 44/55 (80%)
Frame = +3
Query: 516 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 680
AVGITA AGAIT+LLTDRNLNTSFFDPAGGGDPILYQHLF FFGHP
Sbjct: 160 AVGITALLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHP 214
Score = 83.8 bits (198), Expect = 4e-15
Identities = 44/67 (65%), Positives = 45/67 (67%)
Frame = +1
Query: 307 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 486
IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAGISS
Sbjct: 90 IVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINMRINKM 149
Query: 487 SFDQLPL 507
SFDQ+PL
Sbjct: 150 SFDQMPL 156
Score = 78.2 bits (184), Expect = 2e-13
Identities = 40/70 (57%), Positives = 44/70 (62%)
Frame = +2
Query: 77 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINI 256
ELG PGSLIGDDQIYNTIVTAHA N L+PL+LGAPD+AFPR+N
Sbjct: 13 ELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMLGAPDMAFPRMNN 72
Query: 257 *DFDSYPPPL 286
F PP L
Sbjct: 73 MSFWLLPPSL 82
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 85.8 bits (203), Expect = 9e-16
Identities = 39/55 (70%), Positives = 43/55 (78%)
Frame = +3
Query: 516 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 680
+V +TAF AGAIT+LLTDRN NT+FFDPAGGGDPILYQHLF FFGHP
Sbjct: 190 SVLVTAFLLLLSLPVLAGAITMLLTDRNFNTTFFDPAGGGDPILYQHLFWFFGHP 244
Score = 60.9 bits (141), Expect = 3e-08
Identities = 28/41 (68%), Positives = 34/41 (82%)
Frame = +1
Query: 307 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 429
+VE G+GTG TVYPPLS +H G +VDLAIFSLHL+G+SS
Sbjct: 120 LVEVGSGTGWTVYPPLSGITSHSGGAVDLAIFSLHLSGVSS 160
Score = 55.6 bits (128), Expect = 1e-06
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +2
Query: 77 ELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 250
EL PG I G+ Q+YN ++TAHA N VP+++GAPD+AFPR+
Sbjct: 41 ELARPGDQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGFGNWFVPILIGAPDMAFPRL 100
Query: 251 NI*DFDSYPPPL 286
N F PP L
Sbjct: 101 NNISFWLLPPSL 112
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 85.0 bits (201), Expect = 2e-15
Identities = 39/55 (70%), Positives = 43/55 (78%)
Frame = +3
Query: 516 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 680
+V ITA AGAIT+LLTDRN+NTSFFDP+GGGDPILYQHLF FFGHP
Sbjct: 171 SVFITAILLLLSLPVLAGAITMLLTDRNMNTSFFDPSGGGDPILYQHLFWFFGHP 225
Score = 66.5 bits (155), Expect = 6e-10
Identities = 31/59 (52%), Positives = 40/59 (67%)
Frame = +2
Query: 77 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 253
ELG PGSLIG+DQIYN+IVT+HA N L+PL+LG+PD++FPR+N
Sbjct: 24 ELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPLMLGSPDMSFPRMN 82
Score = 56.4 bits (130), Expect = 6e-07
Identities = 27/37 (72%), Positives = 28/37 (75%)
Frame = +1
Query: 319 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 429
G GTG TVYPPLS + H G SVDL IFSLHLAG SS
Sbjct: 105 GVGTGWTVYPPLSLILGHGGMSVDLGIFSLHLAGASS 141
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 84.6 bits (200), Expect = 2e-15
Identities = 38/55 (69%), Positives = 42/55 (76%)
Frame = +3
Query: 516 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 680
A+ +TA AGAIT+LLTDRN NTSF+DPAGGGDPILYQHLF FFGHP
Sbjct: 187 AIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLFWFFGHP 241
Score = 63.3 bits (147), Expect = 5e-09
Identities = 31/40 (77%), Positives = 33/40 (82%)
Frame = +1
Query: 310 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 429
VE GAGTG TVYPPLS +H G SVDLAIFSLHL+GISS
Sbjct: 118 VEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISS 157
Score = 57.2 bits (132), Expect = 4e-07
Identities = 32/72 (44%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +2
Query: 77 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 250
EL PG L GD Q+YN I+TAHA N LVP+++GAPD+AFPR+
Sbjct: 38 ELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRL 97
Query: 251 NI*DFDSYPPPL 286
N F PP L
Sbjct: 98 NNISFWLLPPSL 109
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 82.2 bits (194), Expect = 1e-14
Identities = 39/54 (72%), Positives = 41/54 (75%)
Frame = +3
Query: 516 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 677
AV ITA AGAIT+LLTDRN+NTSFFDPAGGGDPILYQHLF F GH
Sbjct: 106 AVEITAILLLLSLPVLAGAITMLLTDRNINTSFFDPAGGGDPILYQHLFWFXGH 159
Score = 66.5 bits (155), Expect = 6e-10
Identities = 31/40 (77%), Positives = 34/40 (85%)
Frame = +1
Query: 310 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 429
VE GAGTG TV PPLS+NIAH G SVDLAIFSLH+AG+ S
Sbjct: 37 VEKGAGTGWTVSPPLSANIAHEGSSVDLAIFSLHMAGVXS 76
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 82.2 bits (194), Expect = 1e-14
Identities = 37/52 (71%), Positives = 40/52 (76%)
Frame = +3
Query: 525 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 680
+TAF AGAIT+LLTDRN NTSFFD +GGGDPILYQHLF FFGHP
Sbjct: 198 VTAFLLLLAVPVLAGAITMLLTDRNFNTSFFDASGGGDPILYQHLFWFFGHP 249
Score = 58.8 bits (136), Expect = 1e-07
Identities = 28/41 (68%), Positives = 33/41 (80%)
Frame = +1
Query: 307 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 429
+VE G GTG TVYPPLSS +H G +VDLAIFSLH++G SS
Sbjct: 125 LVEVGVGTGWTVYPPLSSIQSHSGGAVDLAIFSLHISGASS 165
Score = 56.0 bits (129), Expect = 8e-07
Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Frame = +2
Query: 77 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 250
EL P + L+G+ QIYN ++TAHA N LVP+++G+PD+AFPR+
Sbjct: 46 ELAQPSNHLLLGNHQIYNVLITAHAFLMIFFMVMPVMIGGFGNWLVPIMIGSPDMAFPRL 105
Query: 251 NI*DFDSYPPPL 286
N F PP L
Sbjct: 106 NNISFWLLPPSL 117
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 81.8 bits (193), Expect = 1e-14
Identities = 38/55 (69%), Positives = 41/55 (74%)
Frame = +3
Query: 516 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 680
AV +TA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHP
Sbjct: 187 AVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHP 241
Score = 71.7 bits (168), Expect = 2e-11
Identities = 36/69 (52%), Positives = 42/69 (60%)
Frame = +2
Query: 74 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 253
AEL PG+L+GDDQIYN IVTAHA N LVPL++GAPD+AFPR+N
Sbjct: 39 AELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPILIGGFGNWLVPLMIGAPDMAFPRMN 98
Query: 254 I*DFDSYPP 280
F PP
Sbjct: 99 NMSFWLLPP 107
Score = 67.7 bits (158), Expect = 3e-10
Identities = 31/40 (77%), Positives = 34/40 (85%)
Frame = +1
Query: 310 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 429
VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG+SS
Sbjct: 118 VEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSS 157
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 81.0 bits (191), Expect = 3e-14
Identities = 38/55 (69%), Positives = 41/55 (74%)
Frame = +3
Query: 516 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 680
+V ITA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHP
Sbjct: 188 SVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHP 242
Score = 74.1 bits (174), Expect = 3e-12
Identities = 37/69 (53%), Positives = 43/69 (62%)
Frame = +2
Query: 74 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 253
AELG PG+L+GDDQIYN IVTAHA N LVPL++GAPD+AFPR+N
Sbjct: 40 AELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMN 99
Query: 254 I*DFDSYPP 280
F PP
Sbjct: 100 NMSFWLXPP 108
Score = 69.7 bits (163), Expect = 6e-11
Identities = 33/40 (82%), Positives = 35/40 (87%)
Frame = +1
Query: 310 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 429
VE GAGTG TVYPPL+ N+AH G SVDLAIFSLHLAGISS
Sbjct: 119 VEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGISS 158
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 81.0 bits (191), Expect = 3e-14
Identities = 38/55 (69%), Positives = 41/55 (74%)
Frame = +3
Query: 516 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 680
+V ITA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHP
Sbjct: 187 SVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHP 241
Score = 71.3 bits (167), Expect = 2e-11
Identities = 36/71 (50%), Positives = 43/71 (60%)
Frame = +2
Query: 74 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 253
AELG PG+L+G+D IYN IVTAHA N LVPL++GAPD+AFPR+N
Sbjct: 39 AELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMN 98
Query: 254 I*DFDSYPPPL 286
F PP L
Sbjct: 99 NMSFWLLPPSL 109
Score = 65.3 bits (152), Expect = 1e-09
Identities = 30/41 (73%), Positives = 34/41 (82%)
Frame = +1
Query: 307 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 429
+VE GAGTG TVYPPL+ N +H G SVDL IFSLHLAG+SS
Sbjct: 117 MVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSS 157
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 80.6 bits (190), Expect = 3e-14
Identities = 37/55 (67%), Positives = 41/55 (74%)
Frame = +3
Query: 516 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 680
+V +TA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHP
Sbjct: 187 SVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHP 241
Score = 71.7 bits (168), Expect = 2e-11
Identities = 36/69 (52%), Positives = 42/69 (60%)
Frame = +2
Query: 74 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 253
AEL PG+L+GDDQIYN IVTAHA N LVPL++GAPD+AFPR+N
Sbjct: 39 AELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPVMIGGFGNWLVPLMIGAPDMAFPRMN 98
Query: 254 I*DFDSYPP 280
F PP
Sbjct: 99 NMSFWLLPP 107
Score = 67.7 bits (158), Expect = 3e-10
Identities = 31/40 (77%), Positives = 34/40 (85%)
Frame = +1
Query: 310 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 429
VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG+SS
Sbjct: 118 VEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSS 157
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 79.4 bits (187), Expect = 8e-14
Identities = 35/55 (63%), Positives = 42/55 (76%)
Frame = +3
Query: 516 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 680
+V +TA+ AGAIT+LLTDRN T+FFDPAGGGDPIL+QH+F FFGHP
Sbjct: 293 SVFVTAWLLLLSLPVLAGAITMLLTDRNFGTTFFDPAGGGDPILFQHIFWFFGHP 347
Score = 46.4 bits (105), Expect = 7e-04
Identities = 19/41 (46%), Positives = 29/41 (70%)
Frame = +1
Query: 307 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 429
+++ GAG G T YPP+S+ R+VD AIF++H++G SS
Sbjct: 223 MIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVSGASS 263
Score = 39.9 bits (89), Expect = 0.058
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +2
Query: 74 AELGNPGSLIG--DDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 247
A LG L G D ++N ++T H N +PL++GAPD+AFPR
Sbjct: 143 ALLGTMDQLDGNPDGHLWNVLITGHGVLMMFFVVIPALFGGFGNYFMPLMIGAPDMAFPR 202
Query: 248 IN 253
+N
Sbjct: 203 LN 204
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 78.2 bits (184), Expect = 2e-13
Identities = 37/55 (67%), Positives = 40/55 (72%)
Frame = +3
Query: 516 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 680
AV ITA AG IT++LTDRN NTSFF+ AGGGDPILYQHLF FFGHP
Sbjct: 188 AVVITAVLLLLSLPVLAGGITMVLTDRNFNTSFFEVAGGGDPILYQHLFWFFGHP 242
Score = 60.9 bits (141), Expect = 3e-08
Identities = 28/40 (70%), Positives = 32/40 (80%)
Frame = +1
Query: 310 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 429
+ENG GTG T+YPPLS +H G SVDLAIF LHL+GISS
Sbjct: 119 IENGVGTGWTLYPPLSGIQSHSGPSVDLAIFGLHLSGISS 158
Score = 51.2 bits (117), Expect = 2e-05
Identities = 26/60 (43%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +2
Query: 77 ELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 253
EL PG I D+Q+YN+I+TAHA N L+PL LG PD+ FPR+N
Sbjct: 40 ELSGPGVQYIADNQLYNSIITAHAIIMIFFMVMPALIGGFGNFLLPLGLGGPDMGFPRLN 99
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 75.8 bits (178), Expect = 1e-12
Identities = 33/55 (60%), Positives = 39/55 (70%)
Frame = +3
Query: 516 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 680
+V +T+F A AIT+LL DRN NTSF+DP GGGD +LYQHLF FFGHP
Sbjct: 191 SVAVTSFLVIVAIPVLAAAITLLLFDRNFNTSFYDPVGGGDVVLYQHLFWFFGHP 245
Score = 56.0 bits (129), Expect = 8e-07
Identities = 27/39 (69%), Positives = 28/39 (71%)
Frame = +1
Query: 313 ENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 429
E G GTG TVYPPLSS +H G SVDL IFS HL GI S
Sbjct: 123 EGGPGTGWTVYPPLSSLQSHSGASVDLMIFSFHLVGIGS 161
Score = 43.2 bits (97), Expect = 0.006
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = +2
Query: 77 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 250
EL PG L G+ YN I T H N VP+++GAPD++FPR+
Sbjct: 42 ELAFPGDQILFGEYHFYNMITTVHGVLMLFVVVMPILFGGFGNYFVPILIGAPDMSFPRL 101
Query: 251 N 253
N
Sbjct: 102 N 102
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 75.4 bits (177), Expect = 1e-12
Identities = 37/55 (67%), Positives = 40/55 (72%)
Frame = +3
Query: 516 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 680
AV ITA A AIT+LLTDRNLNTSF++ AGGGD ILYQHLF FFGHP
Sbjct: 214 AVVITAVLLLLSLPVLAAAITMLLTDRNLNTSFYELAGGGDAILYQHLFWFFGHP 268
Score = 57.2 bits (132), Expect = 4e-07
Identities = 26/41 (63%), Positives = 30/41 (73%)
Frame = +1
Query: 307 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 429
I+ENG GTG T+YPPLS +H VDL IF LHL+GISS
Sbjct: 144 IIENGVGTGWTLYPPLSGIQSHSSMGVDLGIFGLHLSGISS 184
Score = 50.0 bits (114), Expect = 5e-05
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +2
Query: 77 ELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 253
EL PG I D+Q+YN+I+T+H N L+P+++G PD+AFPR+N
Sbjct: 66 ELSGPGIQYIEDNQLYNSIITSHGVIMIFFMVMPALIGGFGNFLLPILIGGPDMAFPRLN 125
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 74.5 bits (175), Expect = 2e-12
Identities = 36/53 (67%), Positives = 39/53 (73%)
Frame = +3
Query: 516 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 674
+V ITA AGAIT+LLTDR NT+FFDPAGGGDPILYQHLF FFG
Sbjct: 188 SVLITAILLLLSLPVLAGAITMLLTDRYFNTTFFDPAGGGDPILYQHLFWFFG 240
Score = 69.3 bits (162), Expect = 8e-11
Identities = 33/71 (46%), Positives = 42/71 (59%)
Frame = +2
Query: 77 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINI 256
EL +PGS++GDD +YN IVTAHA N VPL++GAPD+AFPR+N
Sbjct: 41 ELSSPGSMLGDDHLYNVIVTAHAFVMIFFLVMPTMIGGFGNWFVPLMIGAPDMAFPRLNN 100
Query: 257 *DFDSYPPPLY 289
F PP L+
Sbjct: 101 ISFWLLPPALF 111
Score = 65.3 bits (152), Expect = 1e-09
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +1
Query: 307 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 429
+VE GAGTG TVYPPL+S AH G SVD+AIFSLHLAG+SS
Sbjct: 118 LVEQGAGTGWTVYPPLASIQAHSGGSVDMAIFSLHLAGLSS 158
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 74.1 bits (174), Expect = 3e-12
Identities = 35/49 (71%), Positives = 37/49 (75%)
Frame = +3
Query: 516 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 662
+V ITA AGAIT+LLTDRN NTSFFDPAGGGDPILYQHLF
Sbjct: 170 SVKITAILLLLSLPVLAGAITMLLTDRNFNTSFFDPAGGGDPILYQHLF 218
Score = 72.1 bits (169), Expect = 1e-11
Identities = 36/70 (51%), Positives = 42/70 (60%)
Frame = +2
Query: 77 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINI 256
ELG PGS IG+DQ+YN +VTAHA N LVPL+LGAPD+AFPR+N
Sbjct: 23 ELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPLMLGAPDMAFPRLNN 82
Query: 257 *DFDSYPPPL 286
F PP L
Sbjct: 83 MSFWFLPPSL 92
Score = 70.1 bits (164), Expect = 5e-11
Identities = 33/40 (82%), Positives = 35/40 (87%)
Frame = +1
Query: 310 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 429
VE+GAGTG TVYPPLS N AH G SVDLAIFSLHLAG+SS
Sbjct: 101 VESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHLAGVSS 140
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 73.7 bits (173), Expect = 4e-12
Identities = 34/55 (61%), Positives = 39/55 (70%)
Frame = +3
Query: 516 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 680
+V +TAF A AIT+LLTDRN T+F+D AGGGDP LYQHLF FFGHP
Sbjct: 230 SVLVTAFLLLLALPVLAAAITMLLTDRNFGTTFYDAAGGGDPELYQHLFWFFGHP 284
Score = 47.6 bits (108), Expect = 3e-04
Identities = 24/38 (63%), Positives = 29/38 (76%)
Frame = +1
Query: 316 NGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 429
NGAGTG TVY PLS++ G +VD+AI SLH+AG SS
Sbjct: 164 NGAGTGWTVYAPLSTS-GSAGPAVDMAILSLHIAGASS 200
Score = 38.7 bits (86), Expect = 0.13
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +2
Query: 116 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 253
++N ++TAH N VP+++GAPD+AFPR+N
Sbjct: 93 LWNVLITAHGLIMVFFMVMPAMIGGFGNWFVPIMIGAPDMAFPRMN 138
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 72.9 bits (171), Expect = 7e-12
Identities = 33/49 (67%), Positives = 37/49 (75%)
Frame = +3
Query: 516 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 662
A+ +TA AGAIT+LLTDRN NTSF+DPAGGGDPILYQHLF
Sbjct: 187 AIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLF 235
Score = 63.3 bits (147), Expect = 5e-09
Identities = 31/40 (77%), Positives = 33/40 (82%)
Frame = +1
Query: 310 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 429
VE GAGTG TVYPPLS +H G SVDLAIFSLHL+GISS
Sbjct: 118 VEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISS 157
Score = 57.2 bits (132), Expect = 4e-07
Identities = 32/72 (44%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +2
Query: 77 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 250
EL PG L GD Q+YN I+TAHA N LVP+++GAPD+AFPR+
Sbjct: 38 ELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRL 97
Query: 251 NI*DFDSYPPPL 286
N F PP L
Sbjct: 98 NNISFWLLPPSL 109
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 72.1 bits (169), Expect = 1e-11
Identities = 33/55 (60%), Positives = 37/55 (67%)
Frame = +3
Query: 516 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 680
A+ ITAF + IT+LL DRN NTSFF+ AGGGDPI YQH F FFGHP
Sbjct: 188 AIFITAFLLLLSLPVLSAGITMLLMDRNFNTSFFEVAGGGDPIFYQHAFWFFGHP 242
Score = 64.5 bits (150), Expect = 2e-09
Identities = 32/41 (78%), Positives = 34/41 (82%)
Frame = +1
Query: 307 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 429
+VE+GAGTG TVYPPLSS AH G SVDLAIFSLHL ISS
Sbjct: 118 LVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFSLHLTSISS 158
Score = 44.4 bits (100), Expect = 0.003
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +2
Query: 77 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 250
EL PGS L G+ Q++N +V HA N ++PL++GA D++FPRI
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLAMPALIGGFGNYMLPLMIGATDMSFPRI 98
Query: 251 N 253
N
Sbjct: 99 N 99
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 72.1 bits (169), Expect = 1e-11
Identities = 32/55 (58%), Positives = 39/55 (70%)
Frame = +3
Query: 516 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 680
++ ITAF + IT+LL DRN NTSFF+ +GGGDPILY+HLF FFGHP
Sbjct: 188 SIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGHP 242
Score = 63.3 bits (147), Expect = 5e-09
Identities = 31/41 (75%), Positives = 34/41 (82%)
Frame = +1
Query: 307 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 429
+VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL ISS
Sbjct: 118 LVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTSISS 158
Score = 45.6 bits (103), Expect = 0.001
Identities = 25/61 (40%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +2
Query: 77 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 250
EL PGS L G+ Q++N +V HA N L+PL++GA D AFPRI
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGATDTAFPRI 98
Query: 251 N 253
N
Sbjct: 99 N 99
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 71.3 bits (167), Expect = 2e-11
Identities = 35/69 (50%), Positives = 42/69 (60%)
Frame = +2
Query: 74 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 253
AEL PG+L+GDDQIYN IVTAHA N L+PL++GAPD+AFPR+N
Sbjct: 28 AELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLIPLMIGAPDMAFPRMN 87
Query: 254 I*DFDSYPP 280
F PP
Sbjct: 88 NMSFWLLPP 96
Score = 67.7 bits (158), Expect = 3e-10
Identities = 31/40 (77%), Positives = 34/40 (85%)
Frame = +1
Query: 310 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 429
+E GAGTG TVYPPL+ N+AH G SVDL IFSLHLAGISS
Sbjct: 107 IEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISS 146
Score = 41.1 bits (92), Expect = 0.025
Identities = 21/36 (58%), Positives = 23/36 (63%)
Frame = +3
Query: 516 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP 623
AV ITA A IT+LLTDRNLNT+FFDP
Sbjct: 176 AVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP 211
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 70.1 bits (164), Expect = 5e-11
Identities = 34/72 (47%), Positives = 42/72 (58%)
Frame = +2
Query: 77 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINI 256
ELG PGSL+ DDQ+YN +VTAH N LVPL+LGAPD+AFPR+N
Sbjct: 24 ELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNN 83
Query: 257 *DFDSYPPPLYY 292
F +P +Y
Sbjct: 84 MSFGFFPLHWHY 95
Score = 33.1 bits (72), Expect = 6.6
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +1
Query: 376 GRSVDLAIFSLHLAGISS 429
G SVDLAIF LHLAG+SS
Sbjct: 122 GPSVDLAIFPLHLAGVSS 139
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 69.3 bits (162), Expect = 8e-11
Identities = 29/36 (80%), Positives = 33/36 (91%)
Frame = +3
Query: 573 ITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 680
IT++LTDRN NTSFF+ AGGGDPIL+QHLF FFGHP
Sbjct: 232 ITMVLTDRNFNTSFFEVAGGGDPILFQHLFWFFGHP 267
Score = 56.0 bits (129), Expect = 8e-07
Identities = 29/71 (40%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Frame = +2
Query: 77 ELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 253
EL PG I ++Q+YN+I+TAHA N L+PL++G PD+AFPR+N
Sbjct: 68 ELSGPGVQFIANNQLYNSIITAHAILMIFFMVMPALIGGFGNFLMPLMIGGPDMAFPRLN 127
Query: 254 I*DFDSYPPPL 286
F PP L
Sbjct: 128 NISFWLLPPSL 138
Score = 53.2 bits (122), Expect = 6e-06
Identities = 27/45 (60%), Positives = 33/45 (73%), Gaps = 4/45 (8%)
Frame = +1
Query: 307 IVENGAGTG*TV----YPPLSSNIAHRGRSVDLAIFSLHLAGISS 429
I+E G GTG T+ YPPLS +H G SVDLAIF+LHL+G+SS
Sbjct: 146 IIEGGVGTGWTLLKDKYPPLSGLQSHSGPSVDLAIFALHLSGVSS 190
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 68.9 bits (161), Expect = 1e-10
Identities = 37/69 (53%), Positives = 43/69 (62%)
Frame = +2
Query: 74 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 253
AELG PG+L+GDDQ N IVTAHA N LVPL++GAPD+AFPR+N
Sbjct: 40 AELGQPGTLLGDDQXXNVIVTAHAFVMIFXMXMPIMIGGFGNWLVPLMIGAPDMAFPRMN 99
Query: 254 I*DFDSYPP 280
F PP
Sbjct: 100 NMSFWLLPP 108
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 68.1 bits (159), Expect = 2e-10
Identities = 28/39 (71%), Positives = 33/39 (84%)
Frame = +3
Query: 564 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 680
A IT+LL DRN T+FF+P+GGGDPIL+QHLF FFGHP
Sbjct: 293 ASGITMLLFDRNFGTAFFEPSGGGDPILFQHLFWFFGHP 331
Score = 39.1 bits (87), Expect = 0.10
Identities = 21/37 (56%), Positives = 24/37 (64%)
Frame = +1
Query: 319 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 429
G G G T+YPPLS G VD +FSLHLAG+SS
Sbjct: 217 GCGIGWTLYPPLSI-WEGSGFGVDYLMFSLHLAGVSS 252
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 66.9 bits (156), Expect = 4e-10
Identities = 29/52 (55%), Positives = 35/52 (67%)
Frame = +3
Query: 525 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 680
ITA AG +T++L DRN NTSF+D GGGD IL+QH+F FFGHP
Sbjct: 193 ITAILLIITLPVLAGGVTLILCDRNFNTSFYDVVGGGDLILFQHIFWFFGHP 244
Score = 42.3 bits (95), Expect = 0.011
Identities = 20/61 (32%), Positives = 28/61 (45%)
Frame = +2
Query: 92 GSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINI*DFDS 271
G L GD Q YN ++T+H N +P++ G PD+ FPR+N F
Sbjct: 48 GILFGDYQFYNVLITSHGLIMVFAFIMPVMMGGLVNYFIPVMAGFPDMVFPRLNNMSFWM 107
Query: 272 Y 274
Y
Sbjct: 108 Y 108
Score = 36.7 bits (81), Expect = 0.54
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +1
Query: 307 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 429
+ E G G G T+YP L H + D +F++HL GISS
Sbjct: 120 LTEEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHLLGISS 160
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 66.1 bits (154), Expect = 8e-10
Identities = 30/55 (54%), Positives = 37/55 (67%)
Frame = +3
Query: 516 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 680
+V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F FFGHP
Sbjct: 205 SVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGHP 259
Score = 55.2 bits (127), Expect = 1e-06
Identities = 22/41 (53%), Positives = 34/41 (82%)
Frame = +1
Query: 307 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 429
+++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 135 LIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSS 175
Score = 43.6 bits (98), Expect = 0.005
Identities = 22/56 (39%), Positives = 30/56 (53%)
Frame = +2
Query: 86 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 253
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRIN
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRIN 116
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 66.1 bits (154), Expect = 8e-10
Identities = 30/55 (54%), Positives = 37/55 (67%)
Frame = +3
Query: 516 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 680
+V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F FFGHP
Sbjct: 205 SVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGHP 259
Score = 55.2 bits (127), Expect = 1e-06
Identities = 22/41 (53%), Positives = 34/41 (82%)
Frame = +1
Query: 307 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 429
+++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 135 LIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSS 175
Score = 43.6 bits (98), Expect = 0.005
Identities = 22/56 (39%), Positives = 30/56 (53%)
Frame = +2
Query: 86 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 253
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRIN
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRIN 116
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 66.1 bits (154), Expect = 8e-10
Identities = 30/53 (56%), Positives = 37/53 (69%)
Frame = +3
Query: 516 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 674
++ ITAF + IT+LL DRN NTSFF+ +GGGDPILY+HLF FFG
Sbjct: 188 SIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFG 240
Score = 63.3 bits (147), Expect = 5e-09
Identities = 31/41 (75%), Positives = 34/41 (82%)
Frame = +1
Query: 307 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 429
+VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL ISS
Sbjct: 118 LVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTSISS 158
Score = 45.6 bits (103), Expect = 0.001
Identities = 25/61 (40%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +2
Query: 77 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 250
EL PGS L G+ Q++N +V HA N L+PL++GA D AFPRI
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGATDTAFPRI 98
Query: 251 N 253
N
Sbjct: 99 N 99
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 65.3 bits (152), Expect = 1e-09
Identities = 28/52 (53%), Positives = 35/52 (67%)
Frame = +3
Query: 525 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 680
+T+F AG++ LL DRN NTSF+D GG+P+LYQHLF FFGHP
Sbjct: 200 LTSFLLVLSVPVLAGSLLFLLLDRNFNTSFYDTKKGGNPLLYQHLFWFFGHP 251
Score = 48.0 bits (109), Expect = 2e-04
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +2
Query: 77 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 250
EL +PG G Q+YN+++T H N ++PL+LGAP++AFPR+
Sbjct: 49 ELSSPGGHLFFGSGQVYNSVLTMHGVLMIFFLVMPILIGGFGNWMLPLMLGAPEMAFPRV 108
Query: 251 NI*DF 265
N F
Sbjct: 109 NALSF 113
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 64.9 bits (151), Expect = 2e-09
Identities = 30/53 (56%), Positives = 36/53 (67%)
Frame = +3
Query: 516 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 674
A+ ITA + +T+LL DRN NTSFF+ AGGGDPILY+HLF FFG
Sbjct: 188 AILITAVLLLLTLPVLSAGVTMLLLDRNFNTSFFEVAGGGDPILYEHLFWFFG 240
Score = 61.3 bits (142), Expect = 2e-08
Identities = 29/41 (70%), Positives = 34/41 (82%)
Frame = +1
Query: 307 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 429
+VE+GAGTG TVYPPL+S AH G SVDLAIF+LH+ ISS
Sbjct: 118 LVESGAGTGWTVYPPLASIQAHSGPSVDLAIFALHMTSISS 158
Score = 43.6 bits (98), Expect = 0.005
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +2
Query: 77 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 250
EL PG L G++Q++N +V HA N ++PL++GA D AFPRI
Sbjct: 39 ELAAPGQQYLHGNNQLFNVLVVGHAILMIFFMVMPALIGGFGNYMLPLMIGATDTAFPRI 98
Query: 251 N 253
N
Sbjct: 99 N 99
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 63.3 bits (147), Expect = 5e-09
Identities = 26/39 (66%), Positives = 32/39 (82%)
Frame = +3
Query: 564 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 680
A +T+LL DR+ +TSF+ P GGGDPIL+QHLF FFGHP
Sbjct: 206 AAGLTLLLLDRHFSTSFYYPEGGGDPILWQHLFWFFGHP 244
Score = 46.8 bits (106), Expect = 5e-04
Identities = 21/37 (56%), Positives = 28/37 (75%)
Frame = +1
Query: 319 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 429
G G G T+YPPLS++ G +DLA+FSLH+AG+SS
Sbjct: 123 GLGCGWTMYPPLSNSEFMDGLPIDLAVFSLHMAGMSS 159
Score = 33.9 bits (74), Expect = 3.8
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = +2
Query: 77 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 253
EL +PG + +Y++I+T HA N +PL++ D++ PR+N
Sbjct: 42 ELSHPGEWLQVGYMYHSIMTMHAFMMIFFFVMPTSIGGLGNWFIPLMIKIKDLSMPRLN 100
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 63.3 bits (147), Expect = 5e-09
Identities = 31/40 (77%), Positives = 33/40 (82%)
Frame = +1
Query: 310 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 429
VE GAGTG TVYPPLS +H G SVDLAIFSLHL+GISS
Sbjct: 118 VEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISS 157
Score = 57.2 bits (132), Expect = 4e-07
Identities = 32/72 (44%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +2
Query: 77 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 250
EL PG L GD Q+YN I+TAHA N LVP+++GAPD+AFPR+
Sbjct: 38 ELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRL 97
Query: 251 NI*DFDSYPPPL 286
N F PP L
Sbjct: 98 NNISFWLLPPSL 109
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 60.9 bits (141), Expect = 3e-08
Identities = 25/39 (64%), Positives = 31/39 (79%)
Frame = +3
Query: 564 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 680
A IT++LTD++L T F+D GGDP+LYQHLF FFGHP
Sbjct: 187 AVGITLILTDKHLGTCFYDATMGGDPLLYQHLFWFFGHP 225
Score = 36.7 bits (81), Expect = 0.54
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +1
Query: 322 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 429
A G T YPPLSS SV+ ++FSLHLAGI+S
Sbjct: 112 ASAGWTFYPPLSS----LSPSVEFSVFSLHLAGIAS 143
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 60.5 bits (140), Expect = 4e-08
Identities = 25/38 (65%), Positives = 29/38 (76%)
Frame = +3
Query: 567 GAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 680
G + +LL+D + NT FFDP GDPILYQHLF FFGHP
Sbjct: 210 GGVLMLLSDLHFNTLFFDPTFAGDPILYQHLFWFFGHP 247
Score = 36.7 bits (81), Expect = 0.54
Identities = 18/40 (45%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Frame = +1
Query: 313 ENGAGTG*TVYPPLSSNIAHRGR-SVDLAIFSLHLAGISS 429
E G GTG T+YPPLS+++ +VD+ IF L ++G++S
Sbjct: 124 EFGGGTGWTLYPPLSTSLMSLSPVAVDVIIFGLLVSGVAS 163
Score = 33.1 bits (72), Expect = 6.6
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +2
Query: 116 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 253
+YN I T H N +P++ G+P++A+PRIN
Sbjct: 58 LYNMIFTIHGIIMIFFNIMPGLFGGFGNYFLPILCGSPELAYPRIN 103
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 60.1 bits (139), Expect = 5e-08
Identities = 28/53 (52%), Positives = 35/53 (66%)
Frame = +3
Query: 516 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 674
+V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F FFG
Sbjct: 205 SVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFG 257
Score = 55.2 bits (127), Expect = 1e-06
Identities = 22/41 (53%), Positives = 34/41 (82%)
Frame = +1
Query: 307 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 429
+++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 135 LIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSS 175
Score = 43.6 bits (98), Expect = 0.005
Identities = 22/56 (39%), Positives = 30/56 (53%)
Frame = +2
Query: 86 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 253
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRIN
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRIN 116
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 59.7 bits (138), Expect = 7e-08
Identities = 29/56 (51%), Positives = 32/56 (57%)
Frame = +2
Query: 509 CMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWT 676
CM C +Y TCFS S+Y IIN K KY IF W P +STFILIFWT
Sbjct: 97 CMICCNYCYFITSFFTCFSSSHYYIINWPKSKYFIFWPNWSSSPYSLSTFILIFWT 152
Score = 56.0 bits (129), Expect = 8e-07
Identities = 26/33 (78%), Positives = 28/33 (84%)
Frame = +1
Query: 307 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFS 405
+VENGAGTG TVYPPLSS AH G SVDLAI+S
Sbjct: 33 MVENGAGTGWTVYPPLSSGTAHAGASVDLAIYS 65
Score = 33.1 bits (72), Expect = 6.6
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = +2
Query: 212 LILGAPDIAFPRINI*DFDSYPPPL 286
L+LGAPD+AFPR+N F PP L
Sbjct: 1 LMLGAPDMAFPRMNNMSFWMLPPSL 25
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 59.3 bits (137), Expect = 9e-08
Identities = 28/41 (68%), Positives = 31/41 (75%)
Frame = +1
Query: 307 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 429
+VE G G G TVYPPL+S + H G SVD AIFSLHLAG SS
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 58.0 bits (134), Expect = 2e-07
Identities = 22/39 (56%), Positives = 32/39 (82%)
Frame = +3
Query: 564 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 680
AGA+T+L D+ L T+FF+PA GGDP++YQ++F F+ HP
Sbjct: 159 AGAVTMLFLDKYLGTNFFNPAKGGDPLIYQNIFWFYSHP 197
Score = 41.1 bits (92), Expect = 0.025
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +2
Query: 89 PGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 253
PG + D + YN ++T H N L+PL++GA D+AFPR+N
Sbjct: 2 PGMQVVDFKTYNYLLTGHGVGMLFWWAIAAHIGGFGNFLLPLMIGAKDVAFPRLN 56
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 57.2 bits (132), Expect = 4e-07
Identities = 27/55 (49%), Positives = 34/55 (61%)
Frame = +3
Query: 516 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 680
AV TA A +T+ + DRN NTSFF+ AGGGD +LYQHLF ++ HP
Sbjct: 193 AVLFTAILLLLSLPVLAAGLTMGIFDRNFNTSFFEYAGGGDAVLYQHLFYWWNHP 247
Score = 54.8 bits (126), Expect = 2e-06
Identities = 27/41 (65%), Positives = 32/41 (78%)
Frame = +1
Query: 307 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 429
+VE GAGTG TVY PL+ +H G +VDLAIFSLHL+G SS
Sbjct: 123 LVEAGAGTGWTVYFPLAGIQSHSGPAVDLAIFSLHLSGFSS 163
Score = 45.2 bits (102), Expect = 0.002
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +2
Query: 77 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 250
EL N GS L G+ Q +N ++TAHA N L+PL+LGA D+AF R+
Sbjct: 44 ELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLMPLMLGASDMAFARL 103
Query: 251 N 253
N
Sbjct: 104 N 104
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 57.2 bits (132), Expect = 4e-07
Identities = 32/72 (44%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +2
Query: 77 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 250
EL PG L GD Q+YN I+TAHA N LVP+++GAPD+AFPR+
Sbjct: 38 ELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRL 97
Query: 251 NI*DFDSYPPPL 286
N F PP L
Sbjct: 98 NNISFWLLPPSL 109
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 55.2 bits (127), Expect = 1e-06
Identities = 22/41 (53%), Positives = 34/41 (82%)
Frame = +1
Query: 307 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 429
+++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 135 LIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSS 175
Score = 54.4 bits (125), Expect = 3e-06
Identities = 25/49 (51%), Positives = 32/49 (65%)
Frame = +3
Query: 516 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 662
+V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F
Sbjct: 205 SVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIF 253
Score = 43.6 bits (98), Expect = 0.005
Identities = 22/56 (39%), Positives = 30/56 (53%)
Frame = +2
Query: 86 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 253
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRIN
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRIN 116
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 54.8 bits (126), Expect = 2e-06
Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +2
Query: 77 ELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 250
EL PG+ I G+ Q+YN ++TAHA N VP+++G+PD+AFPR+
Sbjct: 42 ELAQPGNQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGFGNWFVPILIGSPDMAFPRL 101
Query: 251 NI*DFDSYPPPL 286
N F PP L
Sbjct: 102 NNISFWLLPPSL 113
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 54.8 bits (126), Expect = 2e-06
Identities = 22/55 (40%), Positives = 32/55 (58%)
Frame = +3
Query: 516 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 680
++ +T+F ++ DR+ NT FF+ + GDP+LYQHLF FFGHP
Sbjct: 193 SIVLTSFLLLLSLPVVTAVFLMVFLDRHYNTMFFESSNSGDPVLYQHLFWFFGHP 247
Score = 40.7 bits (91), Expect = 0.033
Identities = 20/40 (50%), Positives = 30/40 (75%)
Frame = +1
Query: 310 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 429
+E G+GTG T+YPPLS+++++ G +D IF L AGI+S
Sbjct: 126 LEIGSGTGWTLYPPLSTSLSNVG--IDFIIFGLLAAGIAS 163
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 54.4 bits (125), Expect = 3e-06
Identities = 22/39 (56%), Positives = 28/39 (71%)
Frame = +3
Query: 564 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 680
A A+ +L D TSFF+P GGGDP++YQHLF F+ HP
Sbjct: 214 ASALILLSFDLIAGTSFFNPVGGGDPVVYQHLFWFYSHP 252
Score = 35.9 bits (79), Expect = 0.94
Identities = 21/68 (30%), Positives = 30/68 (44%)
Frame = +2
Query: 77 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINI 256
EL P ++YN ++T H N L+PL++G D+AFPR+N
Sbjct: 55 ELATPSPDFVQPEMYNQLMTLHGTIMIFLWIVPAGAAFA-NYLIPLMVGTEDMAFPRLNA 113
Query: 257 *DFDSYPP 280
F PP
Sbjct: 114 VAFWLTPP 121
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 54.0 bits (124), Expect = 3e-06
Identities = 22/28 (78%), Positives = 24/28 (85%)
Frame = +3
Query: 597 NLNTSFFDPAGGGDPILYQHLF*FFGHP 680
N T+FFDPAGGGD IL+QHLF FFGHP
Sbjct: 191 NYYTTFFDPAGGGDXILFQHLFXFFGHP 218
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 53.2 bits (122), Expect = 6e-06
Identities = 25/52 (48%), Positives = 32/52 (61%)
Frame = +3
Query: 525 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 680
+T+F A T L+ DR + T FF+PA GGD +L+QHLF FFGHP
Sbjct: 206 VTSFLVILAMPAIMIASTSLILDRLVGTHFFNPAEGGDVLLWQHLFWFFGHP 257
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 53.2 bits (122), Expect = 6e-06
Identities = 21/38 (55%), Positives = 26/38 (68%)
Frame = +3
Query: 567 GAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 680
G +LL D + TSFF P GGGDP+L+QH F F+ HP
Sbjct: 230 GGAVMLLFDLSFGTSFFRPEGGGDPVLFQHFFWFYSHP 267
Score = 36.3 bits (80), Expect = 0.71
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +2
Query: 77 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 253
EL P + + D +YN + T H N L+P ++GAPD+AFP++N
Sbjct: 64 ELITPPADLVDPSVYNGLYTMHGTVMLFLFLFPILNGFN-NLLIPTMIGAPDMAFPKLN 121
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 52.8 bits (121), Expect = 8e-06
Identities = 24/37 (64%), Positives = 29/37 (78%)
Frame = +3
Query: 570 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 680
AIT LL DRN+N++ +D G DP+LYQHLF FFGHP
Sbjct: 217 AITGLLLDRNINSTIYDVIG--DPVLYQHLFWFFGHP 251
Score = 33.5 bits (73), Expect = 5.0
Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +1
Query: 328 TG*TVYPPLSSNIAHR-GRSVDLAIFSLHLAGISS 429
+G T+YPPLS+ A G ++DL++ +H+ GISS
Sbjct: 135 SGWTLYPPLSTRDADNIGVNIDLSLLVVHVLGISS 169
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 52.8 bits (121), Expect = 8e-06
Identities = 24/37 (64%), Positives = 28/37 (75%)
Frame = +3
Query: 570 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 680
A+ +LL DRN T+FF AGG DPI +QHLF FFGHP
Sbjct: 260 ALIMLLLDRNFGTTFFTVAGG-DPIFWQHLFWFFGHP 295
Score = 33.9 bits (74), Expect = 3.8
Identities = 20/68 (29%), Positives = 29/68 (42%)
Frame = +2
Query: 77 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINI 256
EL + +YN ++T+H N +PL++ A D+AFPRIN
Sbjct: 96 ELATSSETLISPSLYNGLLTSHGITMLFLFGTPMIAAFG-NYFIPLLIDADDMAFPRINA 154
Query: 257 *DFDSYPP 280
F PP
Sbjct: 155 IAFWLLPP 162
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 51.2 bits (117), Expect = 2e-05
Identities = 22/37 (59%), Positives = 28/37 (75%)
Frame = +3
Query: 570 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 680
A+ ++ DR+ T+FF+ A GGDPIL QHLF FFGHP
Sbjct: 366 AVIMMAFDRHWQTTFFEYAYGGDPILSQHLFWFFGHP 402
Score = 34.3 bits (75), Expect = 2.9
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = +2
Query: 77 ELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 250
EL +P S GD Y +VTAH N L+P +G+ D+A+PR+
Sbjct: 88 ELAHPESPFFKGDSLRYLQVVTAHGLIMVFFVVVPILFGGFANFLIPYHVGSKDVAYPRL 147
Query: 251 N 253
N
Sbjct: 148 N 148
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 49.6 bits (113), Expect = 7e-05
Identities = 25/37 (67%), Positives = 27/37 (72%)
Frame = +3
Query: 570 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 680
AI +LL DRN TSFF AG G IL+QHLF FFGHP
Sbjct: 292 AIMMLLFDRNFGTSFF--AGEGGAILWQHLFWFFGHP 326
Score = 45.2 bits (102), Expect = 0.002
Identities = 24/68 (35%), Positives = 35/68 (51%)
Frame = +2
Query: 77 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINI 256
EL +PG + + YN+++T+H N L+PL++GA D+AFPRIN
Sbjct: 122 ELADPGMTVISNTFYNSLLTSHGITMLFLFATPIIAAFS-NYLIPLLIGADDMAFPRINA 180
Query: 257 *DFDSYPP 280
F PP
Sbjct: 181 IAFWLLPP 188
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 49.2 bits (112), Expect = 9e-05
Identities = 21/39 (53%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = +3
Query: 567 GAITILLTDRNL-NTSFFDPAGGGDPILYQHLF*FFGHP 680
G + +L+T NL FDPA GGDP+L+QHLF F+ HP
Sbjct: 229 GLLLVLVTVENLFGFGMFDPARGGDPVLFQHLFWFYSHP 267
Score = 42.7 bits (96), Expect = 0.008
Identities = 22/60 (36%), Positives = 28/60 (46%)
Frame = +2
Query: 77 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINI 256
EL PG I D YN T H N ++PL+LGA D+AFPR+N+
Sbjct: 70 ELLTPGPTIMDAMTYNRTFTLHGLVMIFLFMIPAIPAVFGNFMLPLMLGAKDVAFPRLNL 129
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 48.8 bits (111), Expect = 1e-04
Identities = 20/37 (54%), Positives = 26/37 (70%)
Frame = +3
Query: 570 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 680
A+ +LL DR L ++FFDP GG +L+QH F FGHP
Sbjct: 224 ALAMLLIDRWLGSAFFDPTRGGSAVLWQHYFWIFGHP 260
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 48.4 bits (110), Expect = 2e-04
Identities = 23/37 (62%), Positives = 25/37 (67%)
Frame = +1
Query: 319 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 429
G G VYPP SS +AH +VDL IF LHLAGISS
Sbjct: 111 GVGXXWXVYPPXSSGLAHSSGAVDLGIFXLHLAGISS 147
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 48.4 bits (110), Expect = 2e-04
Identities = 23/39 (58%), Positives = 27/39 (69%)
Frame = +3
Query: 564 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 680
A A+ +LLTDR + FF+PA GGDPI Y HLF F HP
Sbjct: 205 AAALLMLLTDRLGVSGFFNPAVGGDPIAYAHLFWFTFHP 243
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 48.0 bits (109), Expect = 2e-04
Identities = 21/33 (63%), Positives = 24/33 (72%)
Frame = +3
Query: 582 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 680
LL DR+ T FF P GGD +L+QHLF FFGHP
Sbjct: 227 LLFDRHFGTRFFLPNLGGDAVLWQHLFWFFGHP 259
Score = 34.7 bits (76), Expect = 2.2
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +2
Query: 77 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 253
+LG P + +YN + T H N +VPL++GA D+AFPR+N
Sbjct: 59 QLGVPDNTFLTPDVYNQMFTMHGTTMIFLGLMPLNVGLG-NYMVPLMIGARDMAFPRLN 116
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 48.0 bits (109), Expect = 2e-04
Identities = 21/37 (56%), Positives = 24/37 (64%)
Frame = +3
Query: 570 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 680
A +L DRN T FFD A GG P+L+QHLF F HP
Sbjct: 241 AFLLLWLDRNAGTHFFDVAHGGRPLLWQHLFWMFAHP 277
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 48.0 bits (109), Expect = 2e-04
Identities = 25/51 (49%), Positives = 29/51 (56%)
Frame = +2
Query: 512 MSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFIL 664
M C +YS +TC WSYYN IN SKLKYI+F F+ST IL
Sbjct: 84 MICSNYSFTIIIVSTCSCWSYYNTINWSKLKYILFWPSSSWGSYFMSTPIL 134
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 48.0 bits (109), Expect = 2e-04
Identities = 24/53 (45%), Positives = 31/53 (58%)
Frame = +1
Query: 349 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPL 507
PL+S+IAH G SVD+AIFSLHLAG+SS + D++PL
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSSILGSVNFMTTVINMRAKGMTLDRVPL 124
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 48.0 bits (109), Expect = 2e-04
Identities = 25/44 (56%), Positives = 30/44 (68%), Gaps = 5/44 (11%)
Frame = +3
Query: 564 AGAITILLTDRNLNTSFF-----DPAGGGDPILYQHLF*FFGHP 680
AGAI +LL +R+L FF DPA GDP L+QH+F FFGHP
Sbjct: 209 AGAIMLLL-ERHLGMHFFTPVPGDPAASGDPRLFQHIFWFFGHP 251
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 47.6 bits (108), Expect = 3e-04
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = +3
Query: 570 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 680
A+T+L D+ + T FFD A GGD + YQ+LF F+ HP
Sbjct: 205 AVTMLTFDKYIGTHFFDAAAGGDALTYQNLFWFYSHP 241
Score = 39.1 bits (87), Expect = 0.10
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +2
Query: 77 ELGNPGSLIGDD-QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 253
EL G I DD +YNT + H N +PL++GA D+AFPR+N
Sbjct: 42 ELSQIGPTITDDPSVYNTWLYFHGAAMILAFQIPALTGFFANYFIPLMIGAKDVAFPRVN 101
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 47.2 bits (107), Expect = 4e-04
Identities = 24/59 (40%), Positives = 32/59 (54%)
Frame = +3
Query: 516 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPGSLY 692
++ IT AG IT+LL+DRN N FF GG PIL+Q++ FGH L+
Sbjct: 20 SISITVNLSILSLPMLAGTITMLLSDRNFNKFFFILIGGEYPILHQYMLWLFGHTDVLF 78
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 46.8 bits (106), Expect = 5e-04
Identities = 25/57 (43%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Frame = +3
Query: 525 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPA-----GGGDPILYQHLF*FFGHP 680
+TA A +LL DR+ T FF GGGDPIL+QHLF FGHP
Sbjct: 223 LTAILNALFVPVLGSAALLLLLDRSFGTEFFVAGASAVRGGGDPILWQHLFWIFGHP 279
Score = 34.7 bits (76), Expect = 2.2
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = +2
Query: 119 YNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINI*DF 265
Y I T H N L+PL++GA D+AFPR+N+ F
Sbjct: 86 YQQIFTTHGLVMIFFAVTPVLIGTFGNLLIPLMIGARDMAFPRLNMYSF 134
Score = 32.7 bits (71), Expect = 8.8
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 322 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 429
AG G T Y PLS+N+ G L + ++ + G+SS
Sbjct: 155 AGAGWTTYTPLSTNVGMPGMGQTLVVAAIFVTGVSS 190
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 46.8 bits (106), Expect = 5e-04
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = +3
Query: 591 DRNLNTSFFDPAGGGDPILYQHLF*FFGHP 680
+R + FFDP GGDP+L+QHLF FGHP
Sbjct: 254 ERGFDWPFFDPERGGDPLLWQHLFWIFGHP 283
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 45.2 bits (102), Expect = 0.002
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +2
Query: 77 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 250
EL N GS L G+ Q +N ++TAHA N L+PL+LGA D+AF R+
Sbjct: 44 ELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLMPLMLGASDMAFARL 103
Query: 251 N 253
N
Sbjct: 104 N 104
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 45.2 bits (102), Expect = 0.002
Identities = 24/44 (54%), Positives = 27/44 (61%), Gaps = 10/44 (22%)
Frame = +3
Query: 579 ILLTDRNLNTSFFDPA----------GGGDPILYQHLF*FFGHP 680
+LL DR L TSFF P GGG P+L+QHLF FFGHP
Sbjct: 238 MLLLDRLLGTSFFMPTLVEMGQLSKYGGGSPLLFQHLFWFFGHP 281
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 45.2 bits (102), Expect = 0.002
Identities = 17/37 (45%), Positives = 26/37 (70%)
Frame = +3
Query: 570 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 680
A ++L +R + S+F+PA GGDP+L+Q F F+ HP
Sbjct: 215 ATLLVLLERKIGLSWFNPAVGGDPVLFQQFFWFYSHP 251
Score = 35.9 bits (79), Expect = 0.94
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = +2
Query: 77 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 253
+L P + + YN I+T H N +VPL+LGA D+A PR+N
Sbjct: 52 QLAVPNNQFLTGEQYNQILTLHGATMLFFFIIQAGLTGFGNFVVPLMLGARDVALPRVN 110
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 45.2 bits (102), Expect = 0.002
Identities = 22/35 (62%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Frame = +3
Query: 579 ILLTDRNLNTSFF-DPAGGGDPILYQHLF*FFGHP 680
+LL DRNL T FF +PAGG +L+ HLF FFGHP
Sbjct: 217 LLLLDRNLGTEFFLNPAGGA--LLWDHLFWFFGHP 249
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 44.8 bits (101), Expect = 0.002
Identities = 19/37 (51%), Positives = 24/37 (64%)
Frame = +3
Query: 570 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 680
A +L +R+ FF GGDP+L+QHLF FFGHP
Sbjct: 231 ATMLLEIERSFGWPFFTAERGGDPLLWQHLFWFFGHP 267
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 44.4 bits (100), Expect = 0.003
Identities = 19/34 (55%), Positives = 23/34 (67%)
Frame = +3
Query: 579 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 680
+L +R L FFD GGDP+L+QHLF FGHP
Sbjct: 250 LLEAERLLGLPFFDHTLGGDPLLWQHLFWLFGHP 283
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 43.6 bits (98), Expect = 0.005
Identities = 15/36 (41%), Positives = 26/36 (72%)
Frame = +3
Query: 573 ITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 680
+ +++ DR T+FF+P GG+ ++++HLF FGHP
Sbjct: 215 LALMMLDRLFGTNFFNPELGGNTVIWEHLFWIFGHP 250
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 43.2 bits (97), Expect = 0.006
Identities = 22/66 (33%), Positives = 31/66 (46%)
Frame = +2
Query: 77 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINI 256
EL PG I D YN + T H N L+P+++GA D+AFP++N+
Sbjct: 63 ELLTPGPTIMDAMTYNRMFTLHGVVMIFLFMIPAIPSGFGNFLLPIMIGAKDVAFPKLNL 122
Query: 257 *DFDSY 274
F Y
Sbjct: 123 LSFYVY 128
Score = 43.2 bits (97), Expect = 0.006
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +3
Query: 570 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 680
++ ++ + FDPA GGDP+L+QH F F+ HP
Sbjct: 224 SLLLVAVEHAFGWGIFDPARGGDPVLFQHFFWFYSHP 260
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 42.7 bits (96), Expect = 0.008
Identities = 19/37 (51%), Positives = 24/37 (64%)
Frame = +3
Query: 570 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 680
A +L +R + FF GGDP+L+QHLF FFGHP
Sbjct: 290 ATALLELERAFHWPFFAAHLGGDPLLWQHLFWFFGHP 326
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 42.7 bits (96), Expect = 0.008
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = +2
Query: 77 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 250
EL PG+ L G+ Q++N +V HA N L+PL++GA D++F R+
Sbjct: 39 ELAAPGNQYLGGNHQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGASDMSFARL 98
Query: 251 NI*DFDSYPPPL 286
N F PP L
Sbjct: 99 NNISFWLLPPAL 110
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 42.7 bits (96), Expect = 0.008
Identities = 21/39 (53%), Positives = 25/39 (64%)
Frame = +3
Query: 564 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 680
AG + L +R T FFD A GG P+L+Q LF FFGHP
Sbjct: 202 AGLVFAYL-ERLWGTPFFDSALGGSPVLWQQLFWFFGHP 239
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 42.7 bits (96), Expect = 0.008
Identities = 19/33 (57%), Positives = 23/33 (69%)
Frame = +3
Query: 582 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 680
+L DR L +DPA GG +L+QHLF FFGHP
Sbjct: 235 VLYDRKLGGHLYDPANGGS-LLWQHLFWFFGHP 266
Score = 35.9 bits (79), Expect = 0.94
Identities = 20/60 (33%), Positives = 29/60 (48%)
Frame = +2
Query: 74 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 253
AEL PG ++ +N + T H N ++PL +GAPD+AFPR+N
Sbjct: 65 AELFTPGLQFLSNEQFNQLFTMHGTVMLLLYGTPIVWGFA-NYVLPLQIGAPDVAFPRLN 123
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 42.3 bits (95), Expect = 0.011
Identities = 21/37 (56%), Positives = 23/37 (62%)
Frame = +3
Query: 570 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 680
A +L DR FF A GDPIL+QHLF FFGHP
Sbjct: 228 ASLMLALDRMAGMHFFT-AASGDPILWQHLFWFFGHP 263
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 41.5 bits (93), Expect = 0.019
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = +3
Query: 570 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 680
A+ +L+ DR +FF+ GG + YQHLF FGHP
Sbjct: 225 ALIMLMFDRTFAANFFEVLRGGSVVFYQHLFWTFGHP 261
Score = 33.9 bits (74), Expect = 3.8
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +2
Query: 77 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 253
+L PG + + +N + T HA N +PL++GA D+AFPR+N
Sbjct: 57 QLARPGLEVVTARTFNALFTMHATTMIFLGVMPLLSAFM-NYFLPLMIGARDVAFPRLN 114
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 41.1 bits (92), Expect = 0.025
Identities = 17/34 (50%), Positives = 22/34 (64%)
Frame = +3
Query: 579 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 680
+L +R + FF A GGD +L+QHLF FGHP
Sbjct: 224 LLELERAFDMPFFQAAAGGDALLWQHLFWLFGHP 257
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 40.3 bits (90), Expect = 0.044
Identities = 25/66 (37%), Positives = 32/66 (48%), Gaps = 11/66 (16%)
Frame = +3
Query: 516 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP-----------AGGGDPILYQHLF 662
A+ ITA A ++L DR + T FF P AGGG P+L+QHLF
Sbjct: 225 AMFITALLQAFALPVLTAAGFMMLADRLIGTGFFLPEGLVVNNSPMAAGGGQPLLWQHLF 284
Query: 663 *FFGHP 680
F+ HP
Sbjct: 285 WFYSHP 290
Score = 35.5 bits (78), Expect = 1.2
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +2
Query: 113 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINI 256
+ Y +VT HA N L+PL++GA D+AFP +N+
Sbjct: 86 EFYTVLVTMHATVMIFLVIIPILAGAFGNFLIPLMIGADDMAFPTLNM 133
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 40.3 bits (90), Expect = 0.044
Identities = 19/33 (57%), Positives = 20/33 (60%)
Frame = +2
Query: 596 KLKYIIF*SCWRRRPNFISTFILIFWTSWKFIF 694
K KYIIF S W F+STFILIFWT F
Sbjct: 7 KFKYIIFWSSWSSWSYFMSTFILIFWTPSSLYF 39
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 39.9 bits (89), Expect = 0.058
Identities = 26/62 (41%), Positives = 31/62 (50%), Gaps = 10/62 (16%)
Frame = +3
Query: 525 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP----AG------GGDPILYQHLF*FFG 674
ITA A +L+ DR+L TSFF AG GG P+L+QHLF F G
Sbjct: 242 ITAIIGLLSFPVLFSAALLLIFDRSLGTSFFLSEIYIAGEALHHQGGSPVLFQHLFWFLG 301
Query: 675 HP 680
HP
Sbjct: 302 HP 303
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 39.5 bits (88), Expect = 0.076
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +3
Query: 579 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 680
+L +R FF A GGD +L+QHLF FGHP
Sbjct: 224 LLELERAFGLPFFQVAEGGDSLLWQHLFWLFGHP 257
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 38.3 bits (85), Expect = 0.18
Identities = 22/48 (45%), Positives = 26/48 (54%), Gaps = 11/48 (22%)
Frame = +3
Query: 570 AITILLTDRNLNTSFFDPAG-----------GGDPILYQHLF*FFGHP 680
A +L DR TSFF P+G GG +L+QHLF FFGHP
Sbjct: 242 ACILLCLDRVAGTSFFIPSGLVFNDHVIPHGGGSALLWQHLFWFFGHP 289
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 36.3 bits (80), Expect = 0.71
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = +3
Query: 570 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 680
A+ +L DR L T FF GG+ +LY +LF +GHP
Sbjct: 268 ALAMLGADRYLGTHFFTAGLGGNLMLYTNLFWIWGHP 304
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 35.5 bits (78), Expect = 1.2
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +3
Query: 600 LNTSFFDPAGGGDPILYQHLF*FFGHP 680
L S F+P GG P+LYQ F F+ HP
Sbjct: 233 LGLSMFNPGIGGVPVLYQQFFWFYSHP 259
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 35.5 bits (78), Expect = 1.2
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +3
Query: 567 GAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 680
GA+ +L DR L+ FF GG+ ++Y +LF +GHP
Sbjct: 249 GALAMLALDRYLDFHFFTAELGGNAMMYLNLFWAWGHP 286
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 34.7 bits (76), Expect = 2.2
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +3
Query: 627 GGGDPILYQHLF*FFGHP 680
GGG P+L+QHLF F+ HP
Sbjct: 276 GGGQPLLWQHLFWFYSHP 293
Score = 34.3 bits (75), Expect = 2.9
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +2
Query: 113 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINI 256
+ Y + T HA N L+PL++GA D+AFP++N+
Sbjct: 90 EFYTMLFTMHATVMIFLVIIPILAGMFGNFLIPLMIGADDMAFPKLNM 137
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 34.3 bits (75), Expect = 2.9
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +3
Query: 570 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 680
A+ +L DR L+ F GG+P++Y +LF +GHP
Sbjct: 249 ALALLTVDRYLDFHIFTNELGGNPMMYVNLFWAWGHP 285
>UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1;
Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit
I - Pachymerium ferrugineum
Length = 219
Score = 33.9 bits (74), Expect = 3.8
Identities = 20/52 (38%), Positives = 24/52 (46%)
Frame = +3
Query: 255 YKILTPTPLPYIINFKKNCRKWCRNRMNSLPPTFI*YRT*RKIRRSCYFFTT 410
+KIL TPL Y N C K C + +NSLP Y T R +F T
Sbjct: 84 FKILIITPLTYTTNSIYGCSKRCSHSVNSLPAPCCKYLTLGPFRSYNHFCPT 135
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 33.5 bits (73), Expect = 5.0
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +3
Query: 570 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 680
A+ +L DR FF GG P+L+ +LF +GHP
Sbjct: 245 ALALLSFDRLFGAHFFTLEAGGMPMLWANLFWIWGHP 281
>UniRef50_Q5ABE2 Cluster: Putative uncharacterized protein CLN3;
n=1; Candida albicans|Rep: Putative uncharacterized
protein CLN3 - Candida albicans (Yeast)
Length = 785
Score = 33.1 bits (72), Expect = 6.6
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Frame = -1
Query: 649 YKIGSPPPAGSKNDVFKFRSVNN---IVIAPAKTGSDNNNKNAVIPTAHTI 506
Y++ +PP + +KN K S NN IA T ++NNN N+ +P H +
Sbjct: 572 YQMVTPPNSANKNSN-KSNSANNNNTTTIATTTTTTNNNNNNSQLPAPHQL 621
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 534,871,619
Number of Sequences: 1657284
Number of extensions: 9116229
Number of successful extensions: 19768
Number of sequences better than 10.0: 95
Number of HSP's better than 10.0 without gapping: 18917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19714
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54545459628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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