Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0579
         (696 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   4.2  
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    22   5.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   5.5  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   7.3  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   7.3  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   7.3  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 14/54 (25%), Positives = 24/54 (44%)
 Frame = +3

Query: 33  ERKVQKGTKTANRQIVPEANSRKRIARAESSPAKVPNKRQALKTKKEVEAATIV 194
           +R   K    +N  + PE+ +R +  + E SP+  P +R    T    +  T V
Sbjct: 666 QRNFLKNALMSNNILPPESPTRDKSKQNEKSPS--PQQRSPSVTDLSTKDGTTV 717



 Score = 22.2 bits (45), Expect = 4.2
 Identities = 16/99 (16%), Positives = 34/99 (34%)
 Frame = +3

Query: 21   SNTAERKVQKGTKTANRQIVPEANSRKRIARAESSPAKVPNKRQALKTKKEVEAATIVSP 200
            S +    + +   +    + PE           S+P   P+KR+   T  + + A     
Sbjct: 806  SGSESSSISERCSSRVESLTPERKMEPPGVPLNSTPRSTPDKREKSPTSDKAQEADGEVV 865

Query: 201  LKTRPRSTRAAKSEAEVSRKLPVEAAGDNEKMKYDDDRK 317
            +K         ++   V  K   E   ++E+  + +  K
Sbjct: 866  VKKEVDEEERLENHTSVKIKREAEDRDEDERSFHSNGAK 904


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
 Frame = -1

Query: 144 YSVLSLEMI---QRVLSSYGYLLLELFACSP 61
           Y  + LE +   +R+L SY   LLE   CSP
Sbjct: 30  YDNIDLENVVKNERLLKSYVDCLLEKGRCSP 60


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
 Frame = +3

Query: 519 FYV-FVVTLE*FLVCTNLFKLIIFILPLVVFF 611
           FY  F++    FL+CT  F     IL  V +F
Sbjct: 85  FYCPFIIFTVHFLLCTYYFYYAFIILLCVYYF 116



 Score = 21.4 bits (43), Expect = 7.3
 Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
 Frame = +2

Query: 431 FYFHLYFCFCGLIVLTLYFKIKLSVIF--KLILRVC 532
           F  HL F    +I+L +Y+     ++F   L+L VC
Sbjct: 222 FTIHLLFYCVLIILLCIYYFYYAFILFTVHLLLLVC 257


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 13/48 (27%), Positives = 23/48 (47%)
 Frame = -1

Query: 228 RVYFVVGFSRETLWSQPPLLF*SSKLVFYSVLSLEMIQRVLSSYGYLL 85
           R  F+    ++ L S P L+  +S+   YS+  L   Q + +   YL+
Sbjct: 211 RYRFMPDIKKKGLHSLPRLVLFTSEDAHYSIKKLASFQGIGTDNVYLI 258



 Score = 21.0 bits (42), Expect = 9.6
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +3

Query: 213 PRSTRAAKSEAEVSRKLPVEAAGDNEKM 296
           P+S R  K EA+   KL   A    E+M
Sbjct: 465 PKSLRGRKDEADYKDKLHKVAPRIKERM 492


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 437 FHLYFCFCGLIVLTLYF 487
           F+L FCF  L+V+   F
Sbjct: 322 FYLCFCFYWLLVMVAMF 338


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 437 FHLYFCFCGLIVLTLYF 487
           F+L FCF  L+V+   F
Sbjct: 278 FYLCFCFYWLLVMVAMF 294


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,967
Number of Sequences: 336
Number of extensions: 2078
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)