Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0579
(696 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_10901| Best HMM Match : SAM_1 (HMM E-Value=2.5e-09) 34 0.096
SB_14000| Best HMM Match : DUF1213 (HMM E-Value=0.71) 31 0.67
SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7) 31 0.67
SB_46059| Best HMM Match : Astacin (HMM E-Value=2.8e-17) 31 0.89
SB_27034| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_25059| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_19195| Best HMM Match : LEA_4 (HMM E-Value=0.00053) 30 2.1
SB_29195| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_7216| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_40415| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_36010| Best HMM Match : Remorin_C (HMM E-Value=6.1) 29 3.6
SB_32465| Best HMM Match : Chromo (HMM E-Value=3.5e-16) 29 4.8
SB_32406| Best HMM Match : VWA (HMM E-Value=8.8e-32) 29 4.8
SB_3044| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 28 6.3
SB_26376| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1) 28 6.3
SB_4908| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_40929| Best HMM Match : Attractin (HMM E-Value=5.1) 28 8.3
SB_18662| Best HMM Match : Toxin_27 (HMM E-Value=2) 28 8.3
SB_43495| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_1527| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
>SB_10901| Best HMM Match : SAM_1 (HMM E-Value=2.5e-09)
Length = 1472
Score = 34.3 bits (75), Expect = 0.096
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Frame = +3
Query: 33 ERKVQKGTKTANRQIVPEANSRKRIARAESSPAKVPNKRQALKTKKEVEAATIVS--PLK 206
E+KVQ+ T+ +++ E + R + + AK +KR+ K KE E + I PL+
Sbjct: 135 EQKVQRNTEIFLKEL--ETEKEREDNRKKKAAAKRRDKRKRRKAAKENEGSNIKEDLPLE 192
Query: 207 TRPRSTRAAKSEAEVS 254
RP+ +SE + S
Sbjct: 193 NRPQEVAENESEGDGS 208
>SB_14000| Best HMM Match : DUF1213 (HMM E-Value=0.71)
Length = 1281
Score = 31.5 bits (68), Expect = 0.67
Identities = 21/83 (25%), Positives = 37/83 (44%)
Frame = +3
Query: 33 ERKVQKGTKTANRQIVPEANSRKRIARAESSPAKVPNKRQALKTKKEVEAATIVSPLKTR 212
+R+ TKT+ Q + +R R A ++ +K P + A + ++ + R
Sbjct: 307 QRQASHKTKTSKPQDQDKQAARPRQASRKTKTSK-PQDQAARPRRASLKTSKAQDKHAAR 365
Query: 213 PRSTRAAKSEAEVSRKLPVEAAG 281
PR R A+ + RKL + AG
Sbjct: 366 PRQARKARQARQARRKLQNKQAG 388
>SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7)
Length = 521
Score = 31.5 bits (68), Expect = 0.67
Identities = 19/82 (23%), Positives = 40/82 (48%)
Frame = +3
Query: 24 NTAERKVQKGTKTANRQIVPEANSRKRIARAESSPAKVPNKRQALKTKKEVEAATIVSPL 203
N++ ++ + T+ A +I P +R RI R + ++ T+ + I+
Sbjct: 433 NSSSARITR-TRIAKTRITPTRITRPRITRKRITLTRI--------TQTRITRTRIIPTR 483
Query: 204 KTRPRSTRAAKSEAEVSRKLPV 269
T+PR TR ++ ++RK+P+
Sbjct: 484 ITKPRITRTRITKTRITRKIPI 505
>SB_46059| Best HMM Match : Astacin (HMM E-Value=2.8e-17)
Length = 1775
Score = 31.1 bits (67), Expect = 0.89
Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 1/94 (1%)
Frame = +3
Query: 21 SNTAERKVQKGTKTANRQIVPEANSRKRIARAESSPAKVPNKRQALKTKKEVEAATIVSP 200
+NT + Q KT N P+ +KRI +SS A + + K +V + +
Sbjct: 233 NNTLKHGHQVLRKTKNHTKTPQQAKKKRIKHTKSSSADSSDDYEVESIKVKVNFSELKKA 292
Query: 201 LKT-RPRSTRAAKSEAEVSRKLPVEAAGDNEKMK 299
L+T P R K + E + + G+ EK K
Sbjct: 293 LQTFSPEILRKVKHDLEKMER--EKKLGEKEKKK 324
>SB_27034| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 629
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/51 (27%), Positives = 22/51 (43%)
Frame = +3
Query: 159 KTKKEVEAATIVSPLKTRPRSTRAAKSEAEVSRKLPVEAAGDNEKMKYDDD 311
K + +V A ++P + + + R P E + D EK YDDD
Sbjct: 138 KLRNDVNALRTMAPASSSDEDDNDESDKKDQQRNRPAEVSYDIEKSDYDDD 188
>SB_25059| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 613
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/52 (28%), Positives = 32/52 (61%)
Frame = +3
Query: 93 SRKRIARAESSPAKVPNKRQALKTKKEVEAATIVSPLKTRPRSTRAAKSEAE 248
S+ +ARA+ A++ + + +K +++ T+V P++ PR+TR A +A+
Sbjct: 501 SQLELARAKKRIAEIDEELKTIKLL-DLKNQTVVLPMQYSPRTTRKAAVQAD 551
>SB_19195| Best HMM Match : LEA_4 (HMM E-Value=0.00053)
Length = 1152
Score = 29.9 bits (64), Expect = 2.1
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Frame = +3
Query: 45 QKGTKTANRQIVPEANSRKRIARAESSPAKVPNKRQALKTKKEVEAATIV-SPLKTR--P 215
Q+ + T R+IVP AN+R +S + + R +LK E ++ S L+
Sbjct: 530 QQRSSTLRRKIVPTANTRVSRRTTRNSDSATNDFRHSLKDDSEKTLIRVLRSDLEEEEPA 589
Query: 216 RSTRAAK---SEAEVSRKLPVEAAGDNEKMKYDD 308
R R K S+ + RK AA + +K YDD
Sbjct: 590 RHKRVHKKRSSDEKFQRKR--RAAEEEQKRSYDD 621
>SB_29195| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 29.1 bits (62), Expect = 3.6
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Frame = +3
Query: 48 KGTKTANRQIVPEANSRKRIARAESSPAKVPNKRQALKTKKEVEAATIVSPLKTRPR--S 221
K + NR+I +A ++ RA + P +V N+R + K V PL TRP S
Sbjct: 294 KNREKINRKIREKAKLKREEKRA-NLPDEVANRRLKWRQKFIVVNVESALPLITRPSHCS 352
Query: 222 TRAAKSEAEVSRKLPVEAAGDNEKMKYDDDRK 317
+R + + + SR+ + + DR+
Sbjct: 353 SRVSPAPSNTSRRSSSRGSVPRPRRSTSHDRR 384
>SB_7216| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1400
Score = 29.1 bits (62), Expect = 3.6
Identities = 28/111 (25%), Positives = 49/111 (44%), Gaps = 2/111 (1%)
Frame = +3
Query: 6 RGVAVSNTAERKVQKGTKTANRQIVPEANSRKRIARAES-SPAKVPNKRQALKTKKEVEA 182
+ V SN+ ++ +G T +R+ + RK+ A S +K+ N + V A
Sbjct: 158 KNVFNSNSTGNEIDQGDDTNDRKKL----ERKKSDEANRISVSKLKNIFDTAIANESVNA 213
Query: 183 ATIVSPLKTRPRSTRAAKSEAEVSRKLPVEA-AGDNEKMKYDDDRKYKLYI 332
+ KTRP+S AK AE R+ V + + K + YK+++
Sbjct: 214 LNVYRVGKTRPKSDDIAKINAENHRESQVNRWSVPSYVKKSSPESLYKIFV 264
>SB_40415| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1512
Score = 29.1 bits (62), Expect = 3.6
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +3
Query: 54 TKTANRQIVPEANSRKRIARAESSPAKVPNKRQALKTKKEVEAATIVSPLKTRPRS--TR 227
T T + +P N RA+S+P + K + +V+ A ++S + PRS R
Sbjct: 814 TGTDEIRKIPPVNPDVGRLRADSAPKVARSSSDPPKERPKVDPAAVLSRSCSEPRSPPKR 873
Query: 228 AAKSEAEVSRKLPV 269
SEA + LP+
Sbjct: 874 RTSSEAFYTEGLPL 887
>SB_36010| Best HMM Match : Remorin_C (HMM E-Value=6.1)
Length = 183
Score = 29.1 bits (62), Expect = 3.6
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Frame = +3
Query: 48 KGTKTANRQIVPEANSRKRIARAESSPAKVPNKRQALKTKKEVEAATIVSPLKTRPR--S 221
K + NR+I +A ++ RA + P +V N+R + K V PL TRP S
Sbjct: 34 KNREKINRKIREKAKLKREEKRA-NLPDEVANRRLKWRQKFIVVNVESALPLITRPSHCS 92
Query: 222 TRAAKSEAEVSRKLPVEAAGDNEKMKYDDDRK 317
+R + + + SR+ + + DR+
Sbjct: 93 SRVSPAPSNTSRRSSSRGSVPRPRRSTSHDRR 124
>SB_32465| Best HMM Match : Chromo (HMM E-Value=3.5e-16)
Length = 411
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/60 (26%), Positives = 25/60 (41%)
Frame = +3
Query: 72 QIVPEANSRKRIARAESSPAKVPNKRQALKTKKEVEAATIVSPLKTRPRSTRAAKSEAEV 251
++ PE + P+ + L+ KKE A VS + RPR AK E ++
Sbjct: 296 RVTPEKTPTASTSNGHGIPSASVSLLGILEKKKESPKAPEVSSVSPRPRDEHTAKGEPKI 355
>SB_32406| Best HMM Match : VWA (HMM E-Value=8.8e-32)
Length = 1074
Score = 28.7 bits (61), Expect = 4.8
Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Frame = +3
Query: 48 KGTKTANRQIVPEANSRKRIARAESSPAKVPNKRQALKTKKEVEAATIVSPLKTRPRSTR 227
K TA+ + P+ +++ + + +P P K T KEVEA+ + +
Sbjct: 104 KQEATADNKAEPK---KEQASGIKDAPEATPKKGADKATPKEVEASGDEVASEAEAKPVE 160
Query: 228 AAKSEAEVSRK-LPVEAAGDNEKMKYDDDRKYK 323
AAK+E+ +++ P E A +++ +D+ K
Sbjct: 161 AAKTESNPAKEDKPAEKAKEDKAGPAKEDKPSK 193
>SB_3044| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 28.7 bits (61), Expect = 4.8
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Frame = +3
Query: 12 VAVSNTAERKVQKGTKTANRQIVPEANSRKRIARAESSPAKVPNK-RQALK-TKKEVEAA 185
+A S A +++K K Q+ NS+ I ESS + N+ +AL E EA
Sbjct: 272 LAQSELARVELEKQVKKLLVQVSEGTNSKTSITVVESSQLEAANRDSEALSLALSESEAY 331
Query: 186 TIVSPLKTRPRSTRAAKSEAEVSRKLPVEAAGDNEKMK 299
L + + R K E EV+ L ++A D +++K
Sbjct: 332 CKELELHNKTKQERIEKLEKEVA-SLKMQAELDAKEIK 368
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 28.3 bits (60), Expect = 6.3
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 1/103 (0%)
Frame = +3
Query: 18 VSNTAERK-VQKGTKTANRQIVPEANSRKRIARAESSPAKVPNKRQALKTKKEVEAATIV 194
VS E+ +++ T + R++ ++ ++ A +S ++PN+R A K + A++
Sbjct: 283 VSKVREKSCIKQETASKVREVREKSCIKQETASKRASTKRIPNRRTANKHGAKPMASS-- 340
Query: 195 SPLKTRPRSTRAAKSEAEVSRKLPVEAAGDNEKMKYDDDRKYK 323
P +T +K E EV+ +EA G N D D ++
Sbjct: 341 ----NLPEAT-VSKGEKEVT----IEAVGQNPAFTPDSDMAFR 374
>SB_26376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1018
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/61 (24%), Positives = 26/61 (42%)
Frame = +3
Query: 117 ESSPAKVPNKRQALKTKKEVEAATIVSPLKTRPRSTRAAKSEAEVSRKLPVEAAGDNEKM 296
E PAK+ + +K E EA T+ L+ + R + ++ +NEK+
Sbjct: 441 EKLPAKLERLEERMKENAEREARTLRDSLRLLNNQIEKGGGAIDSLRNMVLDLQAENEKL 500
Query: 297 K 299
K
Sbjct: 501 K 501
>SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1)
Length = 768
Score = 28.3 bits (60), Expect = 6.3
Identities = 23/75 (30%), Positives = 34/75 (45%)
Frame = +3
Query: 54 TKTANRQIVPEANSRKRIARAESSPAKVPNKRQALKTKKEVEAATIVSPLKTRPRSTRAA 233
T +A Q E+ K IA A SS A P + K +KE+E LKT +T +
Sbjct: 581 TGSAFPQASKESVGPKIIAEARSSNA-APGSGELEKLRKEIEKLKEEYALKTEEYNTTIS 639
Query: 234 KSEAEVSRKLPVEAA 278
+ ++ + EAA
Sbjct: 640 ELRRDLEKASTKEAA 654
>SB_4908| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1014
Score = 28.3 bits (60), Expect = 6.3
Identities = 20/99 (20%), Positives = 43/99 (43%), Gaps = 4/99 (4%)
Frame = +3
Query: 48 KGTKTANRQIVPEANSRKRIARAESSPAKVPN----KRQALKTKKEVEAATIVSPLKTRP 215
KG + E K + ++SP + N K+ KT K +A+ + +
Sbjct: 591 KGEHEIEDAVYEEGILLKPTMKVKASPQEEKNETGVKKVHKKTGKAAKASKKQAKMDKPS 650
Query: 216 RSTRAAKSEAEVSRKLPVEAAGDNEKMKYDDDRKYKLYI 332
+ T+ + + + K+ + A D + +KY+ + YK+ +
Sbjct: 651 KKTKQGSVKTKPAIKVRPQKAKDEQGVKYESKKTYKVVV 689
>SB_40929| Best HMM Match : Attractin (HMM E-Value=5.1)
Length = 566
Score = 27.9 bits (59), Expect = 8.3
Identities = 23/98 (23%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Frame = +3
Query: 30 AERKVQKGT-KTANRQIVPEANSRKRIARAESSPAKVPNKRQALKTKKEVEAATIVSPLK 206
AER+ + T K ++Q +A SRK E A+ + + K + T S +
Sbjct: 203 AERQASRKTSKPKDKQAARQA-SRKTSKPQEKQAARQASSKTKTSRKTKTSRKTKTSKPQ 261
Query: 207 TRPRSTRAAKSEAEVSRKL-PVEAAGDNEKMKYDDDRK 317
+ + + ++ + SRK + + EK K D+D++
Sbjct: 262 EKNKQEQDKQAARQASRKTSKTKTSKPQEKDKQDEDKQ 299
>SB_18662| Best HMM Match : Toxin_27 (HMM E-Value=2)
Length = 253
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/80 (20%), Positives = 37/80 (46%)
Frame = +3
Query: 111 RAESSPAKVPNKRQALKTKKEVEAATIVSPLKTRPRSTRAAKSEAEVSRKLPVEAAGDNE 290
+A + K +QA++ K++ + + + + RAA++EA R++ ++ +
Sbjct: 35 KANLTVLKASEWKQAIRAKRKATSKFLKNKTSENWENKRAARNEATRQRRIAIKHNWRKQ 94
Query: 291 KMKYDDDRKYKLYI*WCLRR 350
+ DD + +I RR
Sbjct: 95 CVTIDDQLNFSTHINEICRR 114
>SB_43495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1994
Score = 27.9 bits (59), Expect = 8.3
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
Frame = +3
Query: 69 RQIVPEANSRKRIARAESSPA----KVPNKRQALKTKKEVEAATIVSPL--KTRPRSTRA 230
+ + P N + A+ P+ +VP KRQ+ T++E++ + L K R R R
Sbjct: 1549 QSLPPIDNKNTSLVAAKIDPSEDEERVPRKRQSKATQRELKQKADIERLRNKQRLREQRK 1608
Query: 231 AKSEAEVSRK 260
AKS + ++
Sbjct: 1609 AKSHSPEDKR 1618
>SB_1527| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 826
Score = 27.9 bits (59), Expect = 8.3
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Frame = +3
Query: 114 AESSPAKVPNKRQALKTKKEVEAATIVSPLKTRPRSTRAAKSEAEV----SRKLPVEAA- 278
AE S K+ +ALKTKK + +S T RS + +K V SR++ ++A
Sbjct: 582 AELSEEKMKEYMKALKTKKFSKGEPQISSRWTARRSQQKSKLAILVASGKSREMVIKALT 641
Query: 279 -GDNEKMKYDDDRKYK 323
D ++M ++ RKY+
Sbjct: 642 HDDVKRMSAEEVRKYE 657
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,614,693
Number of Sequences: 59808
Number of extensions: 242740
Number of successful extensions: 924
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 924
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1817559367
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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