Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0579
(696 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73103-5|CAA97422.1| 380|Caenorhabditis elegans Hypothetical pr... 36 0.021
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 36 0.021
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 36 0.021
U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical pr... 33 0.19
AF098999-1|AAC68727.1| 150|Caenorhabditis elegans Hypothetical ... 31 0.60
Z96102-2|CAI79216.1| 746|Caenorhabditis elegans Hypothetical pr... 31 0.79
U50066-2|AAA93438.2| 202|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z93391-7|CAB07685.3| 405|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z69385-4|CAA93427.2| 1326|Caenorhabditis elegans Hypothetical pr... 30 1.4
U40059-1|AAA81138.3| 867|Caenorhabditis elegans Hypothetical pr... 30 1.4
U50300-2|AAC48102.1| 335|Caenorhabditis elegans Serpentine rece... 30 1.8
Z81586-11|CAF31485.1| 1165|Caenorhabditis elegans Hypothetical p... 29 2.4
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 29 3.2
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 29 3.2
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 29 3.2
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 29 3.2
Z81587-6|CAB04704.1| 417|Caenorhabditis elegans Hypothetical pr... 29 4.2
U64848-2|AAM29669.2| 376|Caenorhabditis elegans Hypothetical pr... 29 4.2
U41013-2|AAA82300.1| 557|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z50740-2|CAA90608.1| 383|Caenorhabditis elegans Hypothetical pr... 28 5.5
AL031630-14|CAA20993.1| 185|Caenorhabditis elegans Hypothetical... 28 5.5
AF002197-6|AAD34661.1| 446|Caenorhabditis elegans Hypothetical ... 28 5.5
Z46267-15|CAI79255.1| 1100|Caenorhabditis elegans Hypothetical p... 28 7.3
Z46267-14|CAI79254.1| 1030|Caenorhabditis elegans Hypothetical p... 28 7.3
Z46267-11|CAA86426.1| 611|Caenorhabditis elegans Hypothetical p... 28 7.3
Z46267-10|CAA86425.1| 581|Caenorhabditis elegans Hypothetical p... 28 7.3
Z46267-6|CAA86428.2| 1215|Caenorhabditis elegans Hypothetical pr... 28 7.3
U40029-10|AAN65326.1| 644|Caenorhabditis elegans Hypothetical p... 28 7.3
U40029-9|AAN65325.1| 727|Caenorhabditis elegans Hypothetical pr... 28 7.3
AF043697-5|AAB97557.2| 230|Caenorhabditis elegans Hypothetical ... 28 7.3
U39676-4|AAN60532.1| 2747|Caenorhabditis elegans Hypothetical pr... 27 9.7
AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical ... 27 9.7
>Z73103-5|CAA97422.1| 380|Caenorhabditis elegans Hypothetical
protein C08F8.6 protein.
Length = 380
Score = 36.3 bits (80), Expect = 0.021
Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 1/99 (1%)
Frame = +3
Query: 36 RKVQKGTKTANRQIVPEANSRKRIARAESSPAK-VPNKRQALKTKKEVEAATIVSPLKTR 212
R+ K T + E + K+ + K V ++ + + KKEVE A S +T+
Sbjct: 283 REAMKNTGSTEYPYDWEQSLMKKTKEEQEKKKKGVVDQTEKVIKKKEVELAEGKSHKETK 342
Query: 213 PRSTRAAKSEAEVSRKLPVEAAGDNEKMKYDDDRKYKLY 329
T+ +K E ++ E + +K KY+DD+K +LY
Sbjct: 343 -EVTKVSKEIVEEKKEEKKEEKKEEKKEKYEDDKKEELY 380
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 36.3 bits (80), Expect = 0.021
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Frame = +3
Query: 27 TAERKVQKGTKTANRQIVPEA--NSRKRIARAESSPAKVPNKRQALKTKKEVEAATIVSP 200
TAE++ + + ++ V E+ + ++ + +S VP K +TKK+V V
Sbjct: 12806 TAEKQSTEALIESKKKEVDESKISEQQPSDKNKSEVVGVPEKAAGPETKKDVSEIEEVPK 12865
Query: 201 LKTRPRSTRAAKSEAEVSRKLPVEAAGDNEKMKYDD 308
KT + T KS++ +S+K V D++K K DD
Sbjct: 12866 KKTIKKKTE--KSDSSISQKSNVLKPADDDKSKSDD 12899
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 36.3 bits (80), Expect = 0.021
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Frame = +3
Query: 27 TAERKVQKGTKTANRQIVPEA--NSRKRIARAESSPAKVPNKRQALKTKKEVEAATIVSP 200
TAE++ + + ++ V E+ + ++ + +S VP K +TKK+V V
Sbjct: 12806 TAEKQSTEALIESKKKEVDESKISEQQPSDKNKSEVVGVPEKAAGPETKKDVSEIEEVPK 12865
Query: 201 LKTRPRSTRAAKSEAEVSRKLPVEAAGDNEKMKYDD 308
KT + T KS++ +S+K V D++K K DD
Sbjct: 12866 KKTIKKKTE--KSDSSISQKSNVLKPADDDKSKSDD 12899
>U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical protein
C32E12.4 protein.
Length = 1553
Score = 33.1 bits (72), Expect = 0.19
Identities = 26/105 (24%), Positives = 43/105 (40%)
Frame = +3
Query: 3 ARGVAVSNTAERKVQKGTKTANRQIVPEANSRKRIARAESSPAKVPNKRQALKTKKEVEA 182
AR + T KVQ GTK + ++ P +++ + E K K +K KE E
Sbjct: 979 ARKAVIQPTKLEKVQVGTK-IDTKLAPTEEEKRKKKQEEEEEKKRKEKELEMKKNKE-EE 1036
Query: 183 ATIVSPLKTRPRSTRAAKSEAEVSRKLPVEAAGDNEKMKYDDDRK 317
+ ++ +S A K + RK + ++ K K D K
Sbjct: 1037 EKLKKDIEA--KSLAAGKEDKSALRKSALNMKDEDAKKKVATDEK 1079
>AF098999-1|AAC68727.1| 150|Caenorhabditis elegans Hypothetical
protein W04C9.4 protein.
Length = 150
Score = 31.5 bits (68), Expect = 0.60
Identities = 27/95 (28%), Positives = 41/95 (43%)
Frame = +3
Query: 6 RGVAVSNTAERKVQKGTKTANRQIVPEANSRKRIARAESSPAKVPNKRQALKTKKEVEAA 185
RG+AVS+ +K+ G Q VP+ N +K I + E P + K T K A
Sbjct: 51 RGLAVSSL--KKLASG----ELQNVPKVNEKKIIRKTEL-PVRENKKILDAPTGKRGTTA 103
Query: 186 TIVSPLKTRPRSTRAAKSEAEVSRKLPVEAAGDNE 290
++ K + + + RK+ E AGD E
Sbjct: 104 QYITKKKAKKMYKKMTHDARDKYRKIQAELAGDGE 138
>Z96102-2|CAI79216.1| 746|Caenorhabditis elegans Hypothetical
protein H39E23.3 protein.
Length = 746
Score = 31.1 bits (67), Expect = 0.79
Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 3/99 (3%)
Frame = +3
Query: 30 AERKVQKG-TKTANRQIVPEANSRKRIARAES--SPAKVPNKRQALKTKKEVEAATIVSP 200
A+R+ K T++A+ + A + ES S K P KR+A K K E + +P
Sbjct: 167 AKREADKPKTESADSEKKAPAKREADKPKTESADSEKKAPAKREADKPKTESADSEKKAP 226
Query: 201 LKTRPRSTRAAKSEAEVSRKLPVEAAGDNEKMKYDDDRK 317
K S + A+ +K PV+ D K + D K
Sbjct: 227 AKR--ESDKPKTESADSEKKAPVKREADKPKTESADSEK 263
Score = 31.1 bits (67), Expect = 0.79
Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 3/99 (3%)
Frame = +3
Query: 30 AERKVQKG-TKTANRQIVPEANSRKRIARAES--SPAKVPNKRQALKTKKEVEAATIVSP 200
A+R+ K T++A+ + A + ES S K P KR+A K K E + +P
Sbjct: 207 AKREADKPKTESADSEKKAPAKRESDKPKTESADSEKKAPVKREADKPKTESADSEKKAP 266
Query: 201 LKTRPRSTRAAKSEAEVSRKLPVEAAGDNEKMKYDDDRK 317
K S + A+ +K PV+ D K + D K
Sbjct: 267 AKR--ESDKPKTESADSEKKAPVKREADKPKTESADSEK 303
Score = 30.3 bits (65), Expect = 1.4
Identities = 22/75 (29%), Positives = 31/75 (41%)
Frame = +3
Query: 93 SRKRIARAESSPAKVPNKRQALKTKKEVEAATIVSPLKTRPRSTRAAKSEAEVSRKLPVE 272
S K + S K P KR+A K K E + +P K S + A+ +K PV+
Sbjct: 271 SDKPKTESADSEKKAPVKREADKPKTESADSEKKAPAKR--ESDKPKTESADSEKKAPVK 328
Query: 273 AAGDNEKMKYDDDRK 317
D K + D K
Sbjct: 329 READKPKTESADSEK 343
Score = 29.5 bits (63), Expect = 2.4
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 5/101 (4%)
Frame = +3
Query: 30 AERKVQKG-TKTANRQIVPEANSRKRIARAES--SPAKVPNKRQALKTKKEVEAATIVSP 200
A+R+ K T++A+ + A + ES S K P KR+A K K E + +P
Sbjct: 367 AKREADKPKTESADSEKKASAKREADKPKTESADSEKKAPVKREADKPKTESADSEKKAP 426
Query: 201 LKTR--PRSTRAAKSEAEVSRKLPVEAAGDNEKMKYDDDRK 317
+K P T +A SE +K P + D K + D K
Sbjct: 427 VKREADPPKTESADSE----KKAPTKREADPPKTESADSEK 463
Score = 28.7 bits (61), Expect = 4.2
Identities = 24/77 (31%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
Frame = +3
Query: 93 SRKRIARAESSPAKVPNKRQALKTKKEVEAATIVSPLKTR--PRSTRAAKSEAEVSRKLP 266
S K + S K P KR+A K K E + +P K P T +A SE +K P
Sbjct: 311 SDKPKTESADSEKKAPVKREADKPKTESADSEKKAPTKREADPPKTESADSE----KKAP 366
Query: 267 VEAAGDNEKMKYDDDRK 317
+ D K + D K
Sbjct: 367 AKREADKPKTESADSEK 383
Score = 27.5 bits (58), Expect = 9.7
Identities = 17/65 (26%), Positives = 28/65 (43%)
Frame = +3
Query: 123 SPAKVPNKRQALKTKKEVEAATIVSPLKTRPRSTRAAKSEAEVSRKLPVEAAGDNEKMKY 302
S K P KR++ K K E + +P K + +++E +K P + D K +
Sbjct: 61 SEKKAPTKRESDKPKTESADSEKNAPAKREADKPKTESADSE--KKAPAKREADKPKTES 118
Query: 303 DDDRK 317
D K
Sbjct: 119 ADSEK 123
Score = 27.5 bits (58), Expect = 9.7
Identities = 26/99 (26%), Positives = 41/99 (41%), Gaps = 3/99 (3%)
Frame = +3
Query: 30 AERKVQKG-TKTANRQIVPEANSRKRIARAES--SPAKVPNKRQALKTKKEVEAATIVSP 200
A+R+ K T++A+ + A + ES S K P KR+A K K E + +P
Sbjct: 87 AKREADKPKTESADSEKKAPAKREADKPKTESADSEKKAPAKREADKPKTESADSEKKAP 146
Query: 201 LKTRPRSTRAAKSEAEVSRKLPVEAAGDNEKMKYDDDRK 317
K S + A+ + P + D K + D K
Sbjct: 147 AKR--ESDKPKTESADSEKNAPAKREADKPKTESADSEK 183
>U50066-2|AAA93438.2| 202|Caenorhabditis elegans Hypothetical
protein T14A8.2 protein.
Length = 202
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/51 (31%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Frame = +3
Query: 135 VPNKRQALKTKKEVEAATIVSPLKTRPRSTRAAKSEAE---VSRKLPVEAA 278
V +K ++ K +EAAT+VS ++ +P ++ + S +E S + PV +A
Sbjct: 134 VLSKEPEVEESKPIEAATVVSAVEDQPSTSETSSSSSEEPSTSSETPVSSA 184
>Z93391-7|CAB07685.3| 405|Caenorhabditis elegans Hypothetical
protein W04G5.9 protein.
Length = 405
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/71 (23%), Positives = 29/71 (40%), Gaps = 3/71 (4%)
Frame = +3
Query: 57 KTANRQIVPEANSRKRIARAESS---PAKVPNKRQALKTKKEVEAATIVSPLKTRPRSTR 227
KT + ++ S RI ++S P + P K +T E T PR+TR
Sbjct: 108 KTTTKPVITATRSTARITTTKASTLEPPEAPTKASTARTISTTETTTSPPTTTVTPRTTR 167
Query: 228 AAKSEAEVSRK 260
++ + + K
Sbjct: 168 SSTARTVATTK 178
>Z69385-4|CAA93427.2| 1326|Caenorhabditis elegans Hypothetical
protein ZK593.5 protein.
Length = 1326
Score = 30.3 bits (65), Expect = 1.4
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Frame = +3
Query: 87 ANSRKRIARAESSPA-KVPN-KRQALKTKKEVEAAT--IVSPLKTRPRSTRAAKSEAEVS 254
A+SR + ++ P P+ +RQ+L K+ T + P ++PR + A AEV+
Sbjct: 155 ASSRASASASKPRPQFTAPDPRRQSLAPPKKASTTTAPVSKPSLSKPRQSLAPSKPAEVT 214
Query: 255 RKLPVEAAGDNE 290
+ PV AA +E
Sbjct: 215 PQKPVPAAQASE 226
>U40059-1|AAA81138.3| 867|Caenorhabditis elegans Hypothetical
protein K03C7.1 protein.
Length = 867
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/62 (27%), Positives = 27/62 (43%)
Frame = +3
Query: 132 KVPNKRQALKTKKEVEAATIVSPLKTRPRSTRAAKSEAEVSRKLPVEAAGDNEKMKYDDD 311
K P K+ A K K E V+P K +P E E +P++ D ++ + DD
Sbjct: 481 KAPTKKPADKPKPSEEPEKPVAPKKWKPPWEEDPDDEPEADFTVPIKPGEDEDEPEDADD 540
Query: 312 RK 317
+
Sbjct: 541 EE 542
>U50300-2|AAC48102.1| 335|Caenorhabditis elegans Serpentine
receptor, class x protein2 protein.
Length = 335
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -3
Query: 94 LFASGTIC-LFAVLVPFCTFLSAVLDTATP 8
LF IC LF +++PFC FL + TP
Sbjct: 122 LFTRTNICKLFCIIIPFCFFLMYMAQYGTP 151
>Z81586-11|CAF31485.1| 1165|Caenorhabditis elegans Hypothetical
protein T05F1.6 protein.
Length = 1165
Score = 29.5 bits (63), Expect = 2.4
Identities = 24/87 (27%), Positives = 37/87 (42%)
Frame = +3
Query: 18 VSNTAERKVQKGTKTANRQIVPEANSRKRIARAESSPAKVPNKRQALKTKKEVEAATIVS 197
V N K K + ++ + E + RIA +SSPA + A T + + VS
Sbjct: 591 VHNFGAVKYAKLGNSESKYSMTEKAAESRIAELQSSPAAKNRRSLADMTPGKDKMKHRVS 650
Query: 198 PLKTRPRSTRAAKSEAEVSRKLPVEAA 278
+ T R +RA K E + +E A
Sbjct: 651 SVGTSGRRSRAKKEEEHHENDIEMEDA 677
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 29.1 bits (62), Expect = 3.2
Identities = 21/93 (22%), Positives = 40/93 (43%), Gaps = 3/93 (3%)
Frame = +3
Query: 30 AERKVQKGTKTANRQIVPEANSRKRIARAESSPAKVPNKRQ---ALKTKKEVEAATIVSP 200
++RK +K ++ PE K + + + +V + ++ A TKKE A
Sbjct: 1369 SDRKKKKSPSPDKKEKSPEKTEEKPASPTKKTGEEVKSPKEKSPASPTKKEKSPAAEEVK 1428
Query: 201 LKTRPRSTRAAKSEAEVSRKLPVEAAGDNEKMK 299
T+ + ++ ++ E S P + GD K K
Sbjct: 1429 SPTKKEKSPSSPTKKEKSPSSPTKKTGDEVKEK 1461
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 29.1 bits (62), Expect = 3.2
Identities = 21/93 (22%), Positives = 40/93 (43%), Gaps = 3/93 (3%)
Frame = +3
Query: 30 AERKVQKGTKTANRQIVPEANSRKRIARAESSPAKVPNKRQ---ALKTKKEVEAATIVSP 200
++RK +K ++ PE K + + + +V + ++ A TKKE A
Sbjct: 1369 SDRKKKKSPSPDKKEKSPEKTEEKPASPTKKTGEEVKSPKEKSPASPTKKEKSPAAEEVK 1428
Query: 201 LKTRPRSTRAAKSEAEVSRKLPVEAAGDNEKMK 299
T+ + ++ ++ E S P + GD K K
Sbjct: 1429 SPTKKEKSPSSPTKKEKSPSSPTKKTGDEVKEK 1461
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 29.1 bits (62), Expect = 3.2
Identities = 21/93 (22%), Positives = 40/93 (43%), Gaps = 3/93 (3%)
Frame = +3
Query: 30 AERKVQKGTKTANRQIVPEANSRKRIARAESSPAKVPNKRQ---ALKTKKEVEAATIVSP 200
++RK +K ++ PE K + + + +V + ++ A TKKE A
Sbjct: 1369 SDRKKKKSPSPDKKEKSPEKTEEKPASPTKKTGEEVKSPKEKSPASPTKKEKSPAAEEVK 1428
Query: 201 LKTRPRSTRAAKSEAEVSRKLPVEAAGDNEKMK 299
T+ + ++ ++ E S P + GD K K
Sbjct: 1429 SPTKKEKSPSSPTKKEKSPSSPTKKTGDEVKEK 1461
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 29.1 bits (62), Expect = 3.2
Identities = 21/93 (22%), Positives = 40/93 (43%), Gaps = 3/93 (3%)
Frame = +3
Query: 30 AERKVQKGTKTANRQIVPEANSRKRIARAESSPAKVPNKRQ---ALKTKKEVEAATIVSP 200
++RK +K ++ PE K + + + +V + ++ A TKKE A
Sbjct: 1369 SDRKKKKSPSPDKKEKSPEKTEEKPASPTKKTGEEVKSPKEKSPASPTKKEKSPAAEEVK 1428
Query: 201 LKTRPRSTRAAKSEAEVSRKLPVEAAGDNEKMK 299
T+ + ++ ++ E S P + GD K K
Sbjct: 1429 SPTKKEKSPSSPTKKEKSPSSPTKKTGDEVKEK 1461
>Z81587-6|CAB04704.1| 417|Caenorhabditis elegans Hypothetical
protein T06G6.8 protein.
Length = 417
Score = 28.7 bits (61), Expect = 4.2
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +3
Query: 105 IARAESSPAKVPNKRQA-LKTKKEVEAATIVSPLKTRPRSTRAAKSEAEVSRKLP 266
I + + P+ R + L T +A T S L T+P TR+ S + + KLP
Sbjct: 203 ICEGPAQTSTAPSTRSSKLPTSSVWKATTTPSDLPTKPSRTRSLTSTSTTTAKLP 257
>U64848-2|AAM29669.2| 376|Caenorhabditis elegans Hypothetical
protein C50E3.6 protein.
Length = 376
Score = 28.7 bits (61), Expect = 4.2
Identities = 20/62 (32%), Positives = 28/62 (45%)
Frame = +3
Query: 93 SRKRIARAESSPAKVPNKRQALKTKKEVEAATIVSPLKTRPRSTRAAKSEAEVSRKLPVE 272
SR+RI E K + KTKKE A ++S ++ +P + E V K VE
Sbjct: 184 SRRRIKAGEIGVRKETRQEMRTKTKKEDIA--LLSRIEEKPEKMTEKEEEPRVEEKENVE 241
Query: 273 AA 278
A
Sbjct: 242 FA 243
>U41013-2|AAA82300.1| 557|Caenorhabditis elegans Hypothetical
protein T06C10.3 protein.
Length = 557
Score = 28.7 bits (61), Expect = 4.2
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = +3
Query: 114 AESSPAKVPNKRQALKTKKEV-EAATIVSPLKTRPRSTRAAKSEAEVSRKLPVEAAGDNE 290
A SSP+K P K++ KKEV E I ++ + AK E+ + E E
Sbjct: 44 AASSPSKEPAKQEKEDDKKEVEEKKEIEKSVEAKVEGKVKAKVESTQNTDNSQELKAPEE 103
Query: 291 KMKYDDDRKYKLYI 332
K K +K L +
Sbjct: 104 KPKKKKKKKSNLIV 117
>Z50740-2|CAA90608.1| 383|Caenorhabditis elegans Hypothetical
protein F31B12.3 protein.
Length = 383
Score = 28.3 bits (60), Expect = 5.5
Identities = 18/68 (26%), Positives = 31/68 (45%)
Frame = +3
Query: 126 PAKVPNKRQALKTKKEVEAATIVSPLKTRPRSTRAAKSEAEVSRKLPVEAAGDNEKMKYD 305
P + N +A +E++ + L +T SE ++ LPV+ GD +K
Sbjct: 238 PNESANASRAQSVVEEIQHRSRTPTLLRCITNTDGLMSEEMQAQCLPVDLRGDRRTIKLV 297
Query: 306 DDRKYKLY 329
+RK KL+
Sbjct: 298 KERKRKLF 305
>AL031630-14|CAA20993.1| 185|Caenorhabditis elegans Hypothetical
protein Y38H6C.15 protein.
Length = 185
Score = 28.3 bits (60), Expect = 5.5
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 2/98 (2%)
Frame = +3
Query: 12 VAVSNTAERKVQKGTKTANRQIVPEANSRKRIARAESSPAKVPNKR-QALKTKKEVEAAT 188
V S +A V+ G A VP R + + P PNK + ++KK E +
Sbjct: 34 VVESTSASSSVKNGANAAPDCPVPPPGLRS-VGKDTQDPNMPPNKEDKKPESKKSAEKLS 92
Query: 189 IVSPLKTRPRSTRAAKSEAEVSRKL-PVEAAGDNEKMK 299
S KT+ ++T +++ + E KL E + EK K
Sbjct: 93 KKSD-KTKKKTTVSSEDKPEKPEKLTEEEKPKEKEKAK 129
>AF002197-6|AAD34661.1| 446|Caenorhabditis elegans Hypothetical
protein F20H11.4 protein.
Length = 446
Score = 28.3 bits (60), Expect = 5.5
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Frame = +3
Query: 21 SNTAERKV-QKGTKTANRQIV---PEANSRKRIARAESSPAKVPNKRQALKTKKEVEAAT 188
+N E+KV +KG K +++ PE + + + +KVP+ + + KKEV+
Sbjct: 16 NNVVEKKVDKKGKKNGSKEEKSRNPEKEEKSKFKDLKEEKSKVPDDGKKQEDKKEVKKEE 75
Query: 189 IVSPLKTRPRSTRAAK 236
K + R +K
Sbjct: 76 KKKDEKNKKSKNRKSK 91
>Z46267-15|CAI79255.1| 1100|Caenorhabditis elegans Hypothetical
protein F49E2.5j protein.
Length = 1100
Score = 27.9 bits (59), Expect = 7.3
Identities = 22/101 (21%), Positives = 40/101 (39%)
Frame = +3
Query: 18 VSNTAERKVQKGTKTANRQIVPEANSRKRIARAESSPAKVPNKRQALKTKKEVEAATIVS 197
V N E V+K T + + K+ + +E + A ++V T +
Sbjct: 357 VENVVENVVEKSTTPPATENKKKNKKDKKKSESEKVTEQPVESAPAPPQVEQVVETTPPA 416
Query: 198 PLKTRPRSTRAAKSEAEVSRKLPVEAAGDNEKMKYDDDRKY 320
+ KSE+E + + PV+AA ++K DD +
Sbjct: 417 SENKKKNKKDKKKSESEKAVEEPVQAAPSSKKPTADDSMDF 457
>Z46267-14|CAI79254.1| 1030|Caenorhabditis elegans Hypothetical
protein F49E2.5i protein.
Length = 1030
Score = 27.9 bits (59), Expect = 7.3
Identities = 22/101 (21%), Positives = 40/101 (39%)
Frame = +3
Query: 18 VSNTAERKVQKGTKTANRQIVPEANSRKRIARAESSPAKVPNKRQALKTKKEVEAATIVS 197
V N E V+K T + + K+ + +E + A ++V T +
Sbjct: 357 VENVVENVVEKSTTPPATENKKKNKKDKKKSESEKVTEQPVESAPAPPQVEQVVETTPPA 416
Query: 198 PLKTRPRSTRAAKSEAEVSRKLPVEAAGDNEKMKYDDDRKY 320
+ KSE+E + + PV+AA ++K DD +
Sbjct: 417 SENKKKNKKDKKKSESEKAVEEPVQAAPSSKKPTADDSMDF 457
>Z46267-11|CAA86426.1| 611|Caenorhabditis elegans Hypothetical
protein F49E2.5f protein.
Length = 611
Score = 27.9 bits (59), Expect = 7.3
Identities = 22/101 (21%), Positives = 40/101 (39%)
Frame = +3
Query: 18 VSNTAERKVQKGTKTANRQIVPEANSRKRIARAESSPAKVPNKRQALKTKKEVEAATIVS 197
V N E V+K T + + K+ + +E + A ++V T +
Sbjct: 357 VENVVENVVEKSTTPPATENKKKNKKDKKKSESEKVTEQPVESAPAPPQVEQVVETTPPA 416
Query: 198 PLKTRPRSTRAAKSEAEVSRKLPVEAAGDNEKMKYDDDRKY 320
+ KSE+E + + PV+AA ++K DD +
Sbjct: 417 SENKKKNKKDKKKSESEKAVEEPVQAAPSSKKPTADDSMDF 457
>Z46267-10|CAA86425.1| 581|Caenorhabditis elegans Hypothetical
protein F49E2.5e protein.
Length = 581
Score = 27.9 bits (59), Expect = 7.3
Identities = 22/101 (21%), Positives = 40/101 (39%)
Frame = +3
Query: 18 VSNTAERKVQKGTKTANRQIVPEANSRKRIARAESSPAKVPNKRQALKTKKEVEAATIVS 197
V N E V+K T + + K+ + +E + A ++V T +
Sbjct: 357 VENVVENVVEKSTTPPATENKKKNKKDKKKSESEKVTEQPVESAPAPPQVEQVVETTPPA 416
Query: 198 PLKTRPRSTRAAKSEAEVSRKLPVEAAGDNEKMKYDDDRKY 320
+ KSE+E + + PV+AA ++K DD +
Sbjct: 417 SENKKKNKKDKKKSESEKAVEEPVQAAPSSKKPTADDSMDF 457
>Z46267-6|CAA86428.2| 1215|Caenorhabditis elegans Hypothetical
protein F49E2.5a protein.
Length = 1215
Score = 27.9 bits (59), Expect = 7.3
Identities = 22/101 (21%), Positives = 40/101 (39%)
Frame = +3
Query: 18 VSNTAERKVQKGTKTANRQIVPEANSRKRIARAESSPAKVPNKRQALKTKKEVEAATIVS 197
V N E V+K T + + K+ + +E + A ++V T +
Sbjct: 357 VENVVENVVEKSTTPPATENKKKNKKDKKKSESEKVTEQPVESAPAPPQVEQVVETTPPA 416
Query: 198 PLKTRPRSTRAAKSEAEVSRKLPVEAAGDNEKMKYDDDRKY 320
+ KSE+E + + PV+AA ++K DD +
Sbjct: 417 SENKKKNKKDKKKSESEKAVEEPVQAAPSSKKPTADDSMDF 457
>U40029-10|AAN65326.1| 644|Caenorhabditis elegans Hypothetical
protein F10G7.9b protein.
Length = 644
Score = 27.9 bits (59), Expect = 7.3
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Frame = +3
Query: 30 AERKVQKGTKTANRQIVPEAN---SRKRIARAESSPAKVPNKRQALKTKKEVEAATI 191
A+ +V+ TKT+N I PE N S+K +S VP + +A ++K E + +
Sbjct: 222 AKIEVKLATKTSNLSIAPEVNSIDSQKVPLEPTTSETVVPAETEAPPSEKSSELSRV 278
>U40029-9|AAN65325.1| 727|Caenorhabditis elegans Hypothetical
protein F10G7.9a protein.
Length = 727
Score = 27.9 bits (59), Expect = 7.3
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Frame = +3
Query: 30 AERKVQKGTKTANRQIVPEAN---SRKRIARAESSPAKVPNKRQALKTKKEVEAATI 191
A+ +V+ TKT+N I PE N S+K +S VP + +A ++K E + +
Sbjct: 305 AKIEVKLATKTSNLSIAPEVNSIDSQKVPLEPTTSETVVPAETEAPPSEKSSELSRV 361
>AF043697-5|AAB97557.2| 230|Caenorhabditis elegans Hypothetical
protein F56C11.5 protein.
Length = 230
Score = 27.9 bits (59), Expect = 7.3
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +3
Query: 549 FLVCTNLFKLIIFILPLVVFFRVGTL 626
F + LF L+IF+L + +F+++G L
Sbjct: 72 FTIAALLFLLVIFLLFVAIFYQIGNL 97
>U39676-4|AAN60532.1| 2747|Caenorhabditis elegans Hypothetical protein
C23F12.1b protein.
Length = 2747
Score = 27.5 bits (58), Expect = 9.7
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +2
Query: 437 FHLYFCFCGLIVLTLYFKIKLSVIF 511
F + C C VL ++F K+ VIF
Sbjct: 1983 FQIRSCLCACFVLFIFFNFKIHVIF 2007
>AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical
protein Y55B1BR.3 protein.
Length = 679
Score = 27.5 bits (58), Expect = 9.7
Identities = 21/105 (20%), Positives = 48/105 (45%)
Frame = +3
Query: 12 VAVSNTAERKVQKGTKTANRQIVPEANSRKRIARAESSPAKVPNKRQALKTKKEVEAATI 191
V ++ + +K K T + + + + + S +K+ NKR+A ++ + E
Sbjct: 346 VKKNSKSPKKTPKKTAVKEESEESSGDEEEEVVKKKKS-SKI-NKRKAKESSSDEEEEVE 403
Query: 192 VSPLKTRPRSTRAAKSEAEVSRKLPVEAAGDNEKMKYDDDRKYKL 326
SP K + +S R + ++ + E++ + E+ + D K K+
Sbjct: 404 ESP-KKKTKSPRKSSKKSAAKEESEEESSDNEEEEEVDYSPKKKV 447
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,957,722
Number of Sequences: 27780
Number of extensions: 194026
Number of successful extensions: 853
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 715
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 844
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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