Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0575
(633 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4S3Z0 Cluster: Chromosome 20 SCAF14744, whole genome s... 170 3e-41
UniRef50_Q16134 Cluster: Electron transfer flavoprotein-ubiquino... 168 1e-40
UniRef50_Q11190 Cluster: Probable electron transfer flavoprotein... 151 2e-35
UniRef50_Q9HZP5 Cluster: Electron transfer flavoprotein-ubiquino... 124 2e-27
UniRef50_Q89S81 Cluster: Electrotransfer ubiquinone oxidoreducta... 112 8e-24
UniRef50_A6FCU0 Cluster: Electron transfer flavoprotein-ubiquino... 108 9e-23
UniRef50_Q5P5I6 Cluster: Putative uncharacterized protein; n=1; ... 106 4e-22
UniRef50_Q08822 Cluster: Probable electron transfer flavoprotein... 103 5e-21
UniRef50_Q2C4S4 Cluster: Electron transfer flavoprotein-ubiquino... 102 8e-21
UniRef50_Q6MPB3 Cluster: Electron transfer flavoprotein-ubiquino... 97 3e-19
UniRef50_Q9PDT1 Cluster: Electron transfer flavoprotein ubiquino... 93 4e-18
UniRef50_Q1IM34 Cluster: Electron-transferring-flavoprotein dehy... 89 1e-16
UniRef50_Q3B624 Cluster: Electron-transferring-flavoprotein dehy... 79 1e-13
UniRef50_A0LDX9 Cluster: Electron-transferring-flavoprotein dehy... 78 2e-13
UniRef50_Q1NK22 Cluster: Electron-transferring-flavoprotein dehy... 74 2e-12
UniRef50_A0TVN8 Cluster: Putative uncharacterized protein; n=8; ... 55 1e-06
UniRef50_Q9X1L9 Cluster: Ferredoxin; n=7; Bacteria|Rep: Ferredox... 50 5e-05
UniRef50_Q4JBU6 Cluster: Ferredoxin-like protein; n=6; Archaea|R... 50 5e-05
UniRef50_A0HJJ5 Cluster: Putative uncharacterized protein; n=2; ... 48 1e-04
UniRef50_A4J4R6 Cluster: 4Fe-4S ferredoxin, iron-sulfur binding ... 47 4e-04
UniRef50_Q4WXN2 Cluster: Electron transfer flavoprotein-ubiquino... 45 0.001
UniRef50_A5URW5 Cluster: 4Fe-4S ferredoxin, iron-sulfur binding ... 45 0.002
UniRef50_A1HJ36 Cluster: Putative uncharacterized protein; n=1; ... 43 0.005
UniRef50_A6KXX1 Cluster: Putative ferredoxin-type protein; n=3; ... 42 0.012
UniRef50_A0NVF1 Cluster: Putative uncharacterized protein; n=1; ... 38 0.15
UniRef50_Q978W3 Cluster: Ferredoxin; n=2; Thermoplasma|Rep: Ferr... 37 0.35
UniRef50_Q18T48 Cluster: 4Fe-4S ferredoxin, iron-sulfur binding;... 36 0.61
UniRef50_Q24QW8 Cluster: Putative uncharacterized protein; n=1; ... 36 0.81
UniRef50_Q97V60 Cluster: Ferredoxin like protein; n=6; Archaea|R... 36 0.81
UniRef50_A4E724 Cluster: Putative uncharacterized protein; n=1; ... 36 1.1
UniRef50_Q8QV02 Cluster: 'B' spike structural protein; n=1; Fiji... 35 1.4
UniRef50_Q8Z4S6 Cluster: Putative oxidoreductase; n=1; Salmonell... 35 1.4
UniRef50_Q0AV39 Cluster: Putative uncharacterized protein; n=1; ... 35 1.4
UniRef50_Q8ZYL3 Cluster: Ferredoxin like protein; n=5; Thermopro... 35 1.4
UniRef50_Q72EY9 Cluster: Ech hydrogenase, subunit EchF, putative... 35 1.9
UniRef50_A3UJE3 Cluster: Putative uncharacterized protein; n=1; ... 34 3.3
UniRef50_Q46905 Cluster: Ferredoxin-like protein ygcO; n=17; Ent... 34 3.3
UniRef50_P37127 Cluster: Protein aegA; n=42; Enterobacteriaceae|... 33 4.3
UniRef50_A2EEG8 Cluster: Metallothionein family protein; n=4; Tr... 33 7.5
UniRef50_A4VCI2 Cluster: KIAA1751 protein; n=18; Eutheria|Rep: K... 33 7.5
UniRef50_Q8PXX1 Cluster: Iron-sulfur-binding protein; n=4; Metha... 33 7.5
UniRef50_Q8A954 Cluster: Putative ferredoxin-type protein; n=4; ... 32 10.0
UniRef50_A1WTY4 Cluster: 4Fe-4S ferredoxin, iron-sulfur binding ... 32 10.0
UniRef50_Q9LR83 Cluster: F21B7.2; n=2; Arabidopsis thaliana|Rep:... 32 10.0
>UniRef50_Q4S3Z0 Cluster: Chromosome 20 SCAF14744, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 20 SCAF14744, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 600
Score = 170 bits (413), Expect = 3e-41
Identities = 71/82 (86%), Positives = 75/82 (91%)
Frame = +2
Query: 11 DQPPHLTLKDDTVPVKTNLGVYDGPEARFCPAGVYEFVPLEEGDGQRLQINAQNCIHCKT 190
DQPPHLTLKDD VPV NL +YDGPE RFCPAGVYE+VP+E GDG RLQINAQNC+HCKT
Sbjct: 515 DQPPHLTLKDDGVPVGRNLAIYDGPEQRFCPAGVYEYVPMETGDGMRLQINAQNCVHCKT 574
Query: 191 CDIKDPSQNINWVVPEGGGGPA 256
CDIKDPSQNINWVVPEGGGGPA
Sbjct: 575 CDIKDPSQNINWVVPEGGGGPA 596
>UniRef50_Q16134 Cluster: Electron transfer flavoprotein-ubiquinone
oxidoreductase, mitochondrial precursor; n=147; cellular
organisms|Rep: Electron transfer flavoprotein-ubiquinone
oxidoreductase, mitochondrial precursor - Homo sapiens
(Human)
Length = 617
Score = 168 bits (408), Expect = 1e-40
Identities = 69/82 (84%), Positives = 76/82 (92%)
Frame = +2
Query: 11 DQPPHLTLKDDTVPVKTNLGVYDGPEARFCPAGVYEFVPLEEGDGQRLQINAQNCIHCKT 190
DQP HLTL+DD++PV NL +YDGPE RFCPAGVYEFVP+E+GDG RLQINAQNC+HCKT
Sbjct: 532 DQPAHLTLRDDSIPVNRNLSIYDGPEQRFCPAGVYEFVPVEQGDGFRLQINAQNCVHCKT 591
Query: 191 CDIKDPSQNINWVVPEGGGGPA 256
CDIKDPSQNINWVVPEGGGGPA
Sbjct: 592 CDIKDPSQNINWVVPEGGGGPA 613
>UniRef50_Q11190 Cluster: Probable electron transfer
flavoprotein-ubiquinone oxidoreductase, mitochondrial
precursor; n=28; cellular organisms|Rep: Probable
electron transfer flavoprotein-ubiquinone
oxidoreductase, mitochondrial precursor - Caenorhabditis
elegans
Length = 597
Score = 151 bits (365), Expect = 2e-35
Identities = 66/84 (78%), Positives = 70/84 (83%), Gaps = 1/84 (1%)
Frame = +2
Query: 5 TRDQPPHLTLKDDTVPVKTNLGVYDGPEARFCPAGVYEFVPLEEGDGQ-RLQINAQNCIH 181
T DQP HLTLK+D VP+ NL VY GPEARFCPAGVYEFVP E + + RLQINAQNCIH
Sbjct: 509 TEDQPAHLTLKNDQVPLDVNLAVYGGPEARFCPAGVYEFVPSEADESKKRLQINAQNCIH 568
Query: 182 CKTCDIKDPSQNINWVVPEGGGGP 253
CKTCDIKDP QNINWV PEGGGGP
Sbjct: 569 CKTCDIKDPQQNINWVTPEGGGGP 592
>UniRef50_Q9HZP5 Cluster: Electron transfer flavoprotein-ubiquinone
oxidoreductase; n=47; Proteobacteria|Rep: Electron
transfer flavoprotein-ubiquinone oxidoreductase -
Pseudomonas aeruginosa
Length = 551
Score = 124 bits (298), Expect = 2e-27
Identities = 52/81 (64%), Positives = 63/81 (77%)
Frame = +2
Query: 11 DQPPHLTLKDDTVPVKTNLGVYDGPEARFCPAGVYEFVPLEEGDGQRLQINAQNCIHCKT 190
DQP HL L D ++P++ NL +YD P R+CPAGVYE V ++G +R QINAQNC+HCKT
Sbjct: 467 DQPIHLKLADASIPIEKNLPLYDEPAQRYCPAGVYEVVANDDGS-KRFQINAQNCVHCKT 525
Query: 191 CDIKDPSQNINWVVPEGGGGP 253
CDIKDP+QNI WV PEG GGP
Sbjct: 526 CDIKDPAQNITWVAPEGTGGP 546
>UniRef50_Q89S81 Cluster: Electrotransfer ubiquinone oxidoreductase;
n=57; Proteobacteria|Rep: Electrotransfer ubiquinone
oxidoreductase - Bradyrhizobium japonicum
Length = 553
Score = 112 bits (269), Expect = 8e-24
Identities = 49/81 (60%), Positives = 58/81 (71%)
Frame = +2
Query: 11 DQPPHLTLKDDTVPVKTNLGVYDGPEARFCPAGVYEFVPLEEGDGQRLQINAQNCIHCKT 190
DQP HL + D + + V+ GP R+CPAGVYE+V EEG R QINAQNC+HCKT
Sbjct: 470 DQPVHLRVADMNLQKTSEHDVFAGPSNRYCPAGVYEWV--EEGASPRYQINAQNCVHCKT 527
Query: 191 CDIKDPSQNINWVVPEGGGGP 253
CD+KDP+ NI WV PEGGGGP
Sbjct: 528 CDVKDPNGNITWVPPEGGGGP 548
>UniRef50_A6FCU0 Cluster: Electron transfer flavoprotein-ubiquinone
oxidoreductase, putative; n=1; Moritella sp. PE36|Rep:
Electron transfer flavoprotein-ubiquinone
oxidoreductase, putative - Moritella sp. PE36
Length = 578
Score = 108 bits (260), Expect = 9e-23
Identities = 47/81 (58%), Positives = 58/81 (71%)
Frame = +2
Query: 11 DQPPHLTLKDDTVPVKTNLGVYDGPEARFCPAGVYEFVPLEEGDGQRLQINAQNCIHCKT 190
DQP HL L D ++P+ TNL ++ P R+CPA VYE V +++ + QINA+NCIHCK
Sbjct: 495 DQPCHLKLTDSSIPMCTNLPLFAEPAQRYCPAAVYEIVTIDKE--VKFQINAENCIHCKA 552
Query: 191 CDIKDPSQNINWVVPEGGGGP 253
CDIKDPSQNI W PEGG GP
Sbjct: 553 CDIKDPSQNIVWTPPEGGSGP 573
>UniRef50_Q5P5I6 Cluster: Putative uncharacterized protein; n=1;
Azoarcus sp. EbN1|Rep: Putative uncharacterized protein
- Azoarcus sp. (strain EbN1) (Aromatoleum aromaticum
(strain EbN1))
Length = 104
Score = 106 bits (255), Expect = 4e-22
Identities = 45/72 (62%), Positives = 54/72 (75%), Gaps = 4/72 (5%)
Frame = +2
Query: 50 PVKTNLGVYDGPEARFCPAGVYEFVPLE----EGDGQRLQINAQNCIHCKTCDIKDPSQN 217
P+ N+ +D PE R+CPAGVYE V E G+ RLQINAQNC+HCKTCDIKDP+QN
Sbjct: 28 PIAVNVAKFDAPEQRYCPAGVYEIVRDEAGHSSGNSARLQINAQNCVHCKTCDIKDPTQN 87
Query: 218 INWVVPEGGGGP 253
+NWVVP+GG P
Sbjct: 88 VNWVVPQGGEWP 99
>UniRef50_Q08822 Cluster: Probable electron transfer
flavoprotein-ubiquinone oxidoreductase, mitochondrial
precursor; n=9; Saccharomycetales|Rep: Probable electron
transfer flavoprotein-ubiquinone oxidoreductase,
mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 631
Score = 103 bits (246), Expect = 5e-21
Identities = 50/87 (57%), Positives = 60/87 (68%), Gaps = 3/87 (3%)
Frame = +2
Query: 11 DQPPHLTL--KDDTVPVKTNLGVYDGPEARFCPAGVYEFVPLEEGD-GQRLQINAQNCIH 181
D+P HL + +D + + V+ G E+RFCPAGVYEFV E+ G RLQIN+QNCIH
Sbjct: 543 DEPCHLRVPGQDMVKYAERSFPVWKGVESRFCPAGVYEFVKDEKSPVGTRLQINSQNCIH 602
Query: 182 CKTCDIKDPSQNINWVVPEGGGGPATT 262
CKTCDIK P Q+I W VPEGG GP T
Sbjct: 603 CKTCDIKAPRQDITWKVPEGGDGPKYT 629
>UniRef50_Q2C4S4 Cluster: Electron transfer flavoprotein-ubiquinone
oxidoreductase; n=2; Vibrionaceae|Rep: Electron transfer
flavoprotein-ubiquinone oxidoreductase - Photobacterium
sp. SKA34
Length = 569
Score = 102 bits (244), Expect = 8e-21
Identities = 44/81 (54%), Positives = 53/81 (65%)
Frame = +2
Query: 11 DQPPHLTLKDDTVPVKTNLGVYDGPEARFCPAGVYEFVPLEEGDGQRLQINAQNCIHCKT 190
DQP HL L D +P+ +L +D P R+CPAGVYE + E + QINA NC+ CK
Sbjct: 486 DQPCHLQLHDAQIPISQHLKEFDEPSQRYCPAGVYEVIT--ENNQANFQINAGNCLQCKA 543
Query: 191 CDIKDPSQNINWVVPEGGGGP 253
CDIKDPSQNI+W PE G GP
Sbjct: 544 CDIKDPSQNISWTPPESGSGP 564
>UniRef50_Q6MPB3 Cluster: Electron transfer flavoprotein-ubiquinone
oxidoreductase; n=1; Bdellovibrio bacteriovorus|Rep:
Electron transfer flavoprotein-ubiquinone oxidoreductase
- Bdellovibrio bacteriovorus
Length = 578
Score = 97.1 bits (231), Expect = 3e-19
Identities = 46/82 (56%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Frame = +2
Query: 11 DQPPHLTLKDDTVPVKTNLGVYDGPEARFCPAGVYEFVPLEEGDGQR-LQINAQNCIHCK 187
D P HL LKD + Y P FCPA VYE VP + G++ LQIN NCIHCK
Sbjct: 492 DSPNHLILKDGDICRTVCEPQYKSPCNHFCPAAVYEMVPSTKEAGKKDLQINYTNCIHCK 551
Query: 188 TCDIKDPSQNINWVVPEGGGGP 253
TCDIK P +NI W VPEGGGGP
Sbjct: 552 TCDIKCPFENIEWTVPEGGGGP 573
>UniRef50_Q9PDT1 Cluster: Electron transfer flavoprotein ubiquinone
oxidoreductase; n=11; Xanthomonadaceae|Rep: Electron
transfer flavoprotein ubiquinone oxidoreductase -
Xylella fastidiosa
Length = 548
Score = 93.5 bits (222), Expect = 4e-18
Identities = 42/82 (51%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Frame = +2
Query: 11 DQPPHLTLKDDTVPVKTNLGVYDGPEARFCPAGVYEFVP-LEEGDGQRLQINAQNCIHCK 187
DQP HL + D V + Y P RFCPA VY+ + +RL INA NC+HCK
Sbjct: 462 DQPIHLKITDPERCVTRCVEEYGNPCTRFCPANVYQIIEDPSSATNKRLHINAANCVHCK 521
Query: 188 TCDIKDPSQNINWVVPEGGGGP 253
TCDIKDP Q I+W+ PEGG GP
Sbjct: 522 TCDIKDPYQIIDWITPEGGSGP 543
>UniRef50_Q1IM34 Cluster: Electron-transferring-flavoprotein
dehydrogenase; n=1; Acidobacteria bacterium
Ellin345|Rep: Electron-transferring-flavoprotein
dehydrogenase - Acidobacteria bacterium (strain
Ellin345)
Length = 571
Score = 88.6 bits (210), Expect = 1e-16
Identities = 38/82 (46%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Frame = +2
Query: 11 DQPPHLTLKDDTVPVKTNLGVYDGPEARFCPAGVYEFVPLEE-GDGQRLQINAQNCIHCK 187
DQP HL + D + + P FCPA VYE V ++ G+ + +N NC+HCK
Sbjct: 485 DQPAHLVIHDTNICSTRCAKEFGNPCTNFCPANVYEMVDSQDVPGGKEIHLNPSNCVHCK 544
Query: 188 TCDIKDPSQNINWVVPEGGGGP 253
TCDI DP + I WV PEGGGGP
Sbjct: 545 TCDIMDPYEIITWVPPEGGGGP 566
>UniRef50_Q3B624 Cluster: Electron-transferring-flavoprotein
dehydrogenase; n=8; Chlorobiaceae|Rep:
Electron-transferring-flavoprotein dehydrogenase -
Pelodictyon luteolum (strain DSM 273) (Chlorobium
luteolum (strain DSM273))
Length = 559
Score = 78.6 bits (185), Expect = 1e-13
Identities = 36/60 (60%), Positives = 40/60 (66%)
Frame = +2
Query: 74 YDGPEARFCPAGVYEFVPLEEGDGQRLQINAQNCIHCKTCDIKDPSQNINWVVPEGGGGP 253
Y P RFCPAGVYE L +G G L+INA NC+HCKTC+ DP I W PEGGGGP
Sbjct: 499 YGNPCTRFCPAGVYE---LTDGGGA-LRINASNCLHCKTCEAADPYGIITWTPPEGGGGP 554
>UniRef50_A0LDX9 Cluster: Electron-transferring-flavoprotein
dehydrogenase; n=1; Magnetococcus sp. MC-1|Rep:
Electron-transferring-flavoprotein dehydrogenase -
Magnetococcus sp. (strain MC-1)
Length = 542
Score = 77.8 bits (183), Expect = 2e-13
Identities = 36/82 (43%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Frame = +2
Query: 11 DQPPHLTLKDDTVPVKTNLGVYDGPEARFCPAGVYEFVPLEEGDGQRLQI-NAQNCIHCK 187
DQP HL L+D T+P + + PE R+CP V+E + G + + + NC+ CK
Sbjct: 459 DQPIHLQLRDATLPARQGAR-FGFPELRYCPGRVFEVK--RDASGAIIYLRHGGNCLQCK 515
Query: 188 TCDIKDPSQNINWVVPEGGGGP 253
+CDIKDP NI+W PEGG GP
Sbjct: 516 SCDIKDPFNNIHWTPPEGGNGP 537
>UniRef50_Q1NK22 Cluster: Electron-transferring-flavoprotein
dehydrogenase; n=2; delta proteobacterium MLMS-1|Rep:
Electron-transferring-flavoprotein dehydrogenase - delta
proteobacterium MLMS-1
Length = 553
Score = 74.1 bits (174), Expect = 2e-12
Identities = 37/84 (44%), Positives = 45/84 (53%)
Frame = +2
Query: 11 DQPPHLTLKDDTVPVKTNLGVYDGPEARFCPAGVYEFVPLEEGDGQRLQINAQNCIHCKT 190
++P HL + D + + Y P FCPAGVYE + G+ R N NC+HCKT
Sbjct: 473 EEPCHLLIADPAICREQCRAKYGAPCITFCPAGVYEQI----GEQPR-PANPSNCLHCKT 527
Query: 191 CDIKDPSQNINWVVPEGGGGPATT 262
C K P NI W VPEGG GP T
Sbjct: 528 CQRKCPYDNIRWTVPEGGEGPRYT 551
>UniRef50_A0TVN8 Cluster: Putative uncharacterized protein; n=8;
Burkholderia|Rep: Putative uncharacterized protein -
Burkholderia cenocepacia MC0-3
Length = 1602
Score = 55.2 bits (127), Expect = 1e-06
Identities = 35/84 (41%), Positives = 49/84 (58%)
Frame = -3
Query: 262 RCSRSAAALGHNPVDVLRRVFNVARFTVDAVLSIDLQPLTITLLQRYELVYTCRTKPGFG 83
R R AAA G +P DVLRRV +VA V AVL +D + L ++ +ELV+ R +
Sbjct: 373 RVIRPAAAFGRDPHDVLRRVLDVAGLAVHAVLRVDHEALAAVVV-LHELVHRRRAEARLR 431
Query: 82 SIVYS*IGLNRHRIVF*RQMRRLV 11
V + + ++RH V RQ+RRLV
Sbjct: 432 PRVRAQVHVHRHARVLQRQVRRLV 455
>UniRef50_Q9X1L9 Cluster: Ferredoxin; n=7; Bacteria|Rep: Ferredoxin
- Thermotoga maritima
Length = 92
Score = 50.0 bits (114), Expect = 5e-05
Identities = 28/82 (34%), Positives = 41/82 (50%)
Frame = +2
Query: 5 TRDQPPHLTLKDDTVPVKTNLGVYDGPEARFCPAGVYEFVPLEEGDGQRLQINAQNCIHC 184
T ++ PHL +KD+++ + D P CPA VYE+ E G +++ + C+ C
Sbjct: 14 TDEENPHLKIKDESICAEK---CSDRPCVSCCPADVYEWT--ESG----MEVKFEGCLEC 64
Query: 185 KTCDIKDPSQNINWVVPEGGGG 250
TC I P NI W P G G
Sbjct: 65 GTCRIVCPFGNIEWNYPRGNYG 86
>UniRef50_Q4JBU6 Cluster: Ferredoxin-like protein; n=6; Archaea|Rep:
Ferredoxin-like protein - Sulfolobus acidocaldarius
Length = 96
Score = 50.0 bits (114), Expect = 5e-05
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = +2
Query: 8 RDQPPHLTLKDDTVPVK-TNLGVYDGPEARFCPAGVYEFVPLEEGDGQRLQINAQNCIHC 184
RD+ PHL++ + K + P CPA VY +V D R+ ++ +NC+ C
Sbjct: 14 RDEKPHLSIIEPNKCQKCAEINGVPEPCIVVCPANVYSWV-----DNNRIVVSYENCVEC 68
Query: 185 KTCDIKDPSQNINWVVPEGGGGPA 256
C I P NI+W P G G A
Sbjct: 69 GACRIACPFDNISWKYPRYGLGVA 92
>UniRef50_A0HJJ5 Cluster: Putative uncharacterized protein; n=2;
Comamonadaceae|Rep: Putative uncharacterized protein -
Comamonas testosteroni KF-1
Length = 578
Score = 48.4 bits (110), Expect = 1e-04
Identities = 33/83 (39%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Frame = -3
Query: 250 SAAALGHNPVDVLRRVFNVARFTVDAVLSIDLQPLTITL-LQRYELVYTCRTKPGFGSIV 74
+A+A G +P DVLRR+ +VA V AVL IDLQ L + L +EL++ C G+
Sbjct: 13 AASAFGCDPDDVLRRILDVAGLAVHAVLRIDLQTLLAGIGLVLHELIHACGAVALLGAGE 72
Query: 73 YS*IGLNRHRIVF*RQMRRLVPR 5
+ +R+ V RQ+ RLV R
Sbjct: 73 LGQVHGDRNAGVLERQVGRLVLR 95
>UniRef50_A4J4R6 Cluster: 4Fe-4S ferredoxin, iron-sulfur binding
domain protein; n=4; Clostridiales|Rep: 4Fe-4S
ferredoxin, iron-sulfur binding domain protein -
Desulfotomaculum reducens MI-1
Length = 106
Score = 46.8 bits (106), Expect = 4e-04
Identities = 28/80 (35%), Positives = 35/80 (43%)
Frame = +2
Query: 11 DQPPHLTLKDDTVPVKTNLGVYDGPEARFCPAGVYEFVPLEEGDGQRLQINAQNCIHCKT 190
D HL +KD TV + G FCPA VYE+ R+ + + C+ C
Sbjct: 30 DHQSHLVIKDPTVCAEKCAGK---DCTFFCPARVYEW------RDDRISVGHEGCLECGA 80
Query: 191 CDIKDPSQNINWVVPEGGGG 250
C I P NI W P GG G
Sbjct: 81 CRIACPHGNIGWRYPRGGYG 100
>UniRef50_Q4WXN2 Cluster: Electron transfer flavoprotein-ubiquinone
oxidoreductase; n=23; Fungi/Metazoa group|Rep: Electron
transfer flavoprotein-ubiquinone oxidoreductase -
Aspergillus fumigatus (Sartorya fumigata)
Length = 733
Score = 45.2 bits (102), Expect = 0.001
Identities = 26/54 (48%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +2
Query: 11 DQPPHLTLKDDTVPVKTNLGVYDGPEARFCPAGVYEFV-PLEEGDGQRLQINAQ 169
DQP HL + D Y G E RFCPAGVYE+V + G R QINAQ
Sbjct: 553 DQPVHLQVADWDKHTDVAWPKYRGIENRFCPAGVYEYVEDPSKQHGVRFQINAQ 606
>UniRef50_A5URW5 Cluster: 4Fe-4S ferredoxin, iron-sulfur binding
domain protein; n=2; Roseiflexus|Rep: 4Fe-4S ferredoxin,
iron-sulfur binding domain protein - Roseiflexus sp.
RS-1
Length = 110
Score = 44.8 bits (101), Expect = 0.002
Identities = 24/82 (29%), Positives = 42/82 (51%)
Frame = +2
Query: 11 DQPPHLTLKDDTVPVKTNLGVYDGPEARFCPAGVYEFVPLEEGDGQRLQINAQNCIHCKT 190
++ H+ +KD + + P FCPA V+E + G R+ ++ Q C+ C +
Sbjct: 34 EEVAHIRVKDQAICATCD----PKPCLAFCPAHVFE----TDRQG-RVMVSYQACVECGS 84
Query: 191 CDIKDPSQNINWVVPEGGGGPA 256
C + P +N++W +P GG G A
Sbjct: 85 CRVACPFRNVDWRLPRGGYGVA 106
>UniRef50_A1HJ36 Cluster: Putative uncharacterized protein; n=1;
Ralstonia pickettii 12J|Rep: Putative uncharacterized
protein - Ralstonia pickettii 12J
Length = 620
Score = 43.2 bits (97), Expect = 0.005
Identities = 30/81 (37%), Positives = 43/81 (53%)
Frame = -3
Query: 253 RSAAALGHNPVDVLRRVFNVARFTVDAVLSIDLQPLTITLLQRYELVYTCRTKPGFGSIV 74
R A A +P +VLRRV +VA V AVL +DLQ L+ L+ EL++ R G+
Sbjct: 47 RPATAFRGDPHNVLRRVLDVAGLAVHAVLRVDLQALS-ALIVLDELIHASRAVALLGAGK 105
Query: 73 YS*IGLNRHRIVF*RQMRRLV 11
+ R+ + RQ+ RLV
Sbjct: 106 LRQVDARRNGRILQRQVSRLV 126
>UniRef50_A6KXX1 Cluster: Putative ferredoxin-type protein; n=3;
Bacteroidales|Rep: Putative ferredoxin-type protein -
Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC
11154)
Length = 508
Score = 41.9 bits (94), Expect = 0.012
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Frame = +2
Query: 68 GVYDGPEARFCPAGVYEFVPLEEGDGQRLQI---NAQNCIHCKTCDIKDPSQNINWVVPE 238
GV G AR CP G VP + DG+ L+I N + CI C C+ PS+ + + E
Sbjct: 441 GVSCGNCARHCPTGAILMVPKDADDGKSLKIPVVNTERCIGCGACENLCPSRPFSAIYVE 500
Query: 239 G 241
G
Sbjct: 501 G 501
>UniRef50_A0NVF1 Cluster: Putative uncharacterized protein; n=1;
Stappia aggregata IAM 12614|Rep: Putative
uncharacterized protein - Stappia aggregata IAM 12614
Length = 591
Score = 38.3 bits (85), Expect = 0.15
Identities = 20/41 (48%), Positives = 25/41 (60%)
Frame = -3
Query: 262 RCSRSAAALGHNPVDVLRRVFNVARFTVDAVLSIDLQPLTI 140
R R+A A + P DV R+ +VA VDAVL IDL+P I
Sbjct: 10 RIVRAAGAFRNRPGDVAVRILDVAGLAVDAVLRIDLEPRRI 50
>UniRef50_Q978W3 Cluster: Ferredoxin; n=2; Thermoplasma|Rep:
Ferredoxin - Thermoplasma volcanium
Length = 90
Score = 37.1 bits (82), Expect = 0.35
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +2
Query: 98 CPAGVYEFVPLEEGDGQRLQINAQNCIHCKTCDIKDPSQNINWVVPEGGGG 250
CPA Y + +L ++C+ C TCDI ++ W +P+G G
Sbjct: 40 CPANCYTLI------NGKLNFKYEDCVECGTCDIACSHGSVKWTLPKGDNG 84
>UniRef50_Q18T48 Cluster: 4Fe-4S ferredoxin, iron-sulfur binding;
n=2; Desulfitobacterium hafniense|Rep: 4Fe-4S
ferredoxin, iron-sulfur binding - Desulfitobacterium
hafniense (strain DCB-2)
Length = 93
Score = 36.3 bits (80), Expect = 0.61
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +2
Query: 98 CPAGVYEFVPLEEGDGQRLQINAQNCIHCKTCDIKDPSQNINWVVPEGGGG 250
CPAG+Y E+ D ++ + C+ C TC I + I+W P+GG G
Sbjct: 43 CPAGLYS----EQND--QITVEWAGCLECGTCRIICGKKAISWEYPQGGFG 87
>UniRef50_Q24QW8 Cluster: Putative uncharacterized protein; n=1;
Desulfitobacterium hafniense Y51|Rep: Putative
uncharacterized protein - Desulfitobacterium hafniense
(strain Y51)
Length = 90
Score = 35.9 bits (79), Expect = 0.81
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +2
Query: 95 FCPAGVYEFVPLEEGDGQRLQINAQNCIHCKTCDIKDPSQNINWVVPEGGGG 250
FCPAG + V E ++ + C+ C TC + + W P+GG G
Sbjct: 39 FCPAGCFSLVDRE------VKFQYEGCLECGTCRVMCAHNALKWDYPQGGYG 84
>UniRef50_Q97V60 Cluster: Ferredoxin like protein; n=6; Archaea|Rep:
Ferredoxin like protein - Sulfolobus solfataricus
Length = 89
Score = 35.9 bits (79), Expect = 0.81
Identities = 20/56 (35%), Positives = 28/56 (50%)
Frame = +2
Query: 77 DGPEARFCPAGVYEFVPLEEGDGQRLQINAQNCIHCKTCDIKDPSQNINWVVPEGG 244
D P + CPAG YE P DG R+ ++ + C+ C + P I + PEGG
Sbjct: 33 DKPCTKVCPAGTYEPSP----DG-RIVVHYERCLECGAALVACPYGAIKFHFPEGG 83
>UniRef50_A4E724 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 153
Score = 35.5 bits (78), Expect = 1.1
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +2
Query: 77 DGPEARFCPAGVYEFVPLEEGDGQRLQINAQNCIHCKTCDIKDP 208
D P A+ CP G F P R+ +N NCI CK+C + P
Sbjct: 38 DAPCAKACPTGALFFDP----KNHRIGVNEDNCIGCKSCVMACP 77
>UniRef50_Q8QV02 Cluster: 'B' spike structural protein; n=1; Fiji
disease virus|Rep: 'B' spike structural protein - Fiji
disease virus
Length = 1167
Score = 35.1 bits (77), Expect = 1.4
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = -1
Query: 609 NIKYNSYTISHTNRSDILTYICQCQ--LDSDSC 517
N+ Y+S H+NRSDIL C C ++SDSC
Sbjct: 591 NLNYHSQFNEHSNRSDILYSACNCYHFVESDSC 623
>UniRef50_Q8Z4S6 Cluster: Putative oxidoreductase; n=1; Salmonella
typhi|Rep: Putative oxidoreductase - Salmonella typhi
Length = 619
Score = 35.1 bits (77), Expect = 1.4
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = +2
Query: 77 DGPEARFCPAGVYEFVPLEEGDGQRLQINAQNCIHCKTCDIKDPSQNINWVV 232
D P AR CP G + +Q+NAQ CI CK+C + P + V+
Sbjct: 61 DAPCARSCPNGAIAHI------NDSVQVNAQKCIGCKSCVVACPFGTMQMVL 106
>UniRef50_Q0AV39 Cluster: Putative uncharacterized protein; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
Putative uncharacterized protein - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 94
Score = 35.1 bits (77), Expect = 1.4
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +2
Query: 98 CPAGVYEFVPLEEGDGQRLQINAQNCIHCKTCDIKDPSQNINWVVPEGGGG 250
CPAG+Y E +G ++ C+ C TC + ++ + W P GG G
Sbjct: 43 CPAGLYS----ENAEGV-VEFTIDGCLECGTCRLACGTEVLEWNYPGGGSG 88
>UniRef50_Q8ZYL3 Cluster: Ferredoxin like protein; n=5;
Thermoproteaceae|Rep: Ferredoxin like protein -
Pyrobaculum aerophilum
Length = 96
Score = 35.1 bits (77), Expect = 1.4
Identities = 23/77 (29%), Positives = 35/77 (45%)
Frame = +2
Query: 20 PHLTLKDDTVPVKTNLGVYDGPEARFCPAGVYEFVPLEEGDGQRLQINAQNCIHCKTCDI 199
PH+ +KD P K P CPA Y +++GD + ++ + C+ C TC +
Sbjct: 24 PHIRIKD---PEKCRK-CEKKPCTYMCPAKCY----VQQGD--YVVLSTEACVECGTCRV 73
Query: 200 KDPSQNINWVVPEGGGG 250
P +I W P G G
Sbjct: 74 VCPHGSIEWNYPRSGMG 90
>UniRef50_Q72EY9 Cluster: Ech hydrogenase, subunit EchF, putative;
n=2; Desulfovibrio vulgaris subsp. vulgaris|Rep: Ech
hydrogenase, subunit EchF, putative - Desulfovibrio
vulgaris (strain Hildenborough / ATCC 29579 / NCIMB8303)
Length = 133
Score = 34.7 bits (76), Expect = 1.9
Identities = 19/40 (47%), Positives = 23/40 (57%)
Frame = +2
Query: 125 PLEEGDGQRLQINAQNCIHCKTCDIKDPSQNINWVVPEGG 244
P EG RL ++CI CK+C IK PSQ I V P+ G
Sbjct: 26 PAFEGFRGRLVNKIEDCIFCKSCQIKCPSQCIT-VDPKAG 64
>UniRef50_A3UJE3 Cluster: Putative uncharacterized protein; n=1;
Oceanicaulis alexandrii HTCC2633|Rep: Putative
uncharacterized protein - Oceanicaulis alexandrii
HTCC2633
Length = 611
Score = 33.9 bits (74), Expect = 3.3
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = -3
Query: 250 SAAALGHNPVDVLRRVFNVARFTVDAVLSID 158
+AAA PVDVL R+ +VA F + AVL +D
Sbjct: 40 TAAAFRRGPVDVLVRILDVAGFAMHAVLRVD 70
>UniRef50_Q46905 Cluster: Ferredoxin-like protein ygcO; n=17;
Enterobacteriaceae|Rep: Ferredoxin-like protein ygcO -
Escherichia coli (strain K12)
Length = 98
Score = 33.9 bits (74), Expect = 3.3
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +2
Query: 98 CPAGVYEFVPLEEGDGQRLQINAQNCIHCKTCDIK-DPSQNINWVVPEGGGG 250
CPAG++ P EG+ L+I+ ++C+ C TC + D S W P G G
Sbjct: 46 CPAGLFSLTP--EGN---LRIDYRSCLECGTCRLLCDESTLQQWRYPPSGFG 92
>UniRef50_P37127 Cluster: Protein aegA; n=42;
Enterobacteriaceae|Rep: Protein aegA - Escherichia coli
(strain K12)
Length = 659
Score = 33.5 bits (73), Expect = 4.3
Identities = 17/44 (38%), Positives = 21/44 (47%)
Frame = +2
Query: 77 DGPEARFCPAGVYEFVPLEEGDGQRLQINAQNCIHCKTCDIKDP 208
D P AR CP G V +Q+N Q CI CK+C + P
Sbjct: 61 DAPCARSCPNGAISHVD------DSIQVNQQKCIGCKSCVVACP 98
>UniRef50_A2EEG8 Cluster: Metallothionein family protein; n=4;
Trichomonas vaginalis G3|Rep: Metallothionein family
protein - Trichomonas vaginalis G3
Length = 308
Score = 32.7 bits (71), Expect = 7.5
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 516 NNCHCQVDTDKCTSKCHCG 572
+NCHC D +KC+ CHCG
Sbjct: 32 SNCHCTKD-NKCSPDCHCG 49
Score = 32.7 bits (71), Expect = 7.5
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 516 NNCHCQVDTDKCTSKCHCG 572
+NCHC D +KC+ CHCG
Sbjct: 68 SNCHCTKD-NKCSPDCHCG 85
Score = 32.7 bits (71), Expect = 7.5
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 516 NNCHCQVDTDKCTSKCHCG 572
+NCHC D +KC+ CHCG
Sbjct: 98 SNCHCTKD-NKCSPDCHCG 115
Score = 32.7 bits (71), Expect = 7.5
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 516 NNCHCQVDTDKCTSKCHCG 572
+NCHC D +KC+ CHCG
Sbjct: 134 SNCHCTKD-NKCSPDCHCG 151
Score = 32.7 bits (71), Expect = 7.5
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 516 NNCHCQVDTDKCTSKCHCG 572
+NCHC D +KC+ CHCG
Sbjct: 170 SNCHCTKD-NKCSPDCHCG 187
Score = 32.7 bits (71), Expect = 7.5
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 516 NNCHCQVDTDKCTSKCHCG 572
+NCHC D +KC+ CHCG
Sbjct: 200 SNCHCTKD-NKCSPDCHCG 217
Score = 32.7 bits (71), Expect = 7.5
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 516 NNCHCQVDTDKCTSKCHCG 572
+NCHC D +KC+ CHCG
Sbjct: 236 SNCHCTKD-NKCSPDCHCG 253
Score = 32.7 bits (71), Expect = 7.5
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 516 NNCHCQVDTDKCTSKCHCG 572
+NCHC D+ KC+ CHCG
Sbjct: 272 SNCHCTKDS-KCSPDCHCG 289
>UniRef50_A4VCI2 Cluster: KIAA1751 protein; n=18; Eutheria|Rep:
KIAA1751 protein - Homo sapiens (Human)
Length = 851
Score = 32.7 bits (71), Expect = 7.5
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -2
Query: 140 HPPPTVRTRIHLQDKTWLRVHRILLDWS*PAPYRLLTSDAEAGP 9
HPP + R R+ L+DKTW + + P L +A AGP
Sbjct: 380 HPPTSARHRLTLRDKTWNYISDFCKKTTVPTNTYTLDYEAAAGP 423
>UniRef50_Q8PXX1 Cluster: Iron-sulfur-binding protein; n=4;
Methanosarcinaceae|Rep: Iron-sulfur-binding protein -
Methanosarcina mazei (Methanosarcina frisia)
Length = 177
Score = 32.7 bits (71), Expect = 7.5
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +2
Query: 44 TVPVKTNLGVYDGPEA--RFCPAGVYEFVPLEEGDGQRLQINAQNCIHCKTCDIKDPSQ 214
T + LG + P A FCP G + L G+ +L++ C++CK C+ P Q
Sbjct: 92 TTSIAVLLGTFLSPRAWCSFCPMGTAQ--RLIGGNKYQLKLEKDKCVNCKKCEKVCPMQ 148
>UniRef50_Q8A954 Cluster: Putative ferredoxin-type protein; n=4;
Bacteroidales|Rep: Putative ferredoxin-type protein -
Bacteroides thetaiotaomicron
Length = 502
Score = 32.3 bits (70), Expect = 10.0
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Frame = +2
Query: 32 LKDDTVPVKTNLGVYDGPEARFCPAGVYEFVPL--EEGDGQRLQ-INAQNCIHCKTCDIK 202
+K++ VP+ G+ G AR CPA + V E D ++ IN + CI C C+
Sbjct: 425 IKENCVPLTD--GMECGNCARHCPAAAIQMVASDPEIADSPKIPAINVERCIGCGACENL 482
Query: 203 DPSQNINWVVPEG 241
PS+ + + G
Sbjct: 483 CPSRPFSAIYVTG 495
>UniRef50_A1WTY4 Cluster: 4Fe-4S ferredoxin, iron-sulfur binding
domain protein; n=1; Halorhodospira halophila SL1|Rep:
4Fe-4S ferredoxin, iron-sulfur binding domain protein -
Halorhodospira halophila (strain DSM 244 / SL1)
(Ectothiorhodospirahalophila (strain DSM 244 / SL1))
Length = 392
Score = 32.3 bits (70), Expect = 10.0
Identities = 20/56 (35%), Positives = 23/56 (41%)
Frame = +2
Query: 89 ARFCPAGVYEFVPLEEGDGQRLQINAQNCIHCKTCDIKDPSQNINWVVPEGGGGPA 256
A CP G EE DG L + CI C+ C P Q + V GG PA
Sbjct: 277 AALCPTGALHRG--EEADGSGLDFDPAACIACQLCQQACPEQAL--TVTATGGAPA 328
>UniRef50_Q9LR83 Cluster: F21B7.2; n=2; Arabidopsis thaliana|Rep:
F21B7.2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 461
Score = 32.3 bits (70), Expect = 10.0
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = -2
Query: 554 RTFVSVNLTVTVVRLKLK*GFFNQIVCMVSEPQSCSSLLKIFDEFSRST 408
R SVN+ + LKL+ GF+ +VC+ S SL+ D S++T
Sbjct: 303 RLTFSVNVRTRLETLKLRKGFYGNVVCLACAMSSVESLIN--DSLSKTT 349
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 576,738,333
Number of Sequences: 1657284
Number of extensions: 11341918
Number of successful extensions: 30172
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 28823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30135
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46881492319
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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