Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0570
         (647 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3; Eukaryo...    57   3e-07
UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1; ...    54   2e-06
UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular organ...    54   2e-06
UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: L...    54   2e-06
UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep: Bet...    54   2e-06
UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: L...    42   0.017
UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:...    38   0.21 
UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1; ...    38   0.28 
UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ...    37   0.37 
UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1; ...    34   3.4  
UniRef50_Q48727 Cluster: Beta-galactosidase; n=3; Lactococcus la...    33   4.5  
UniRef50_P81650 Cluster: Beta-galactosidase; n=26; Gammaproteoba...    33   7.9  

>UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3;
           Eukaryota|Rep: beta-galactosidase - Entamoeba
           histolytica HM-1:IMSS
          Length = 86

 Score = 57.2 bits (132), Expect = 3e-07
 Identities = 24/24 (100%), Positives = 24/24 (100%)
 Frame = +1

Query: 574 HWPSFYNVVTGKTLALPNLIALQH 645
           HWPSFYNVVTGKTLALPNLIALQH
Sbjct: 5   HWPSFYNVVTGKTLALPNLIALQH 28


>UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1;
           Erwinia amylovora|Rep: Putative uncharacterized protein
           - Erwinia amylovora (Fire blight bacteria)
          Length = 123

 Score = 54.4 bits (125), Expect = 2e-06
 Identities = 24/24 (100%), Positives = 24/24 (100%)
 Frame = +3

Query: 576 LAVVLQRRDWENPGVTQLNRLAAH 647
           LAVVLQRRDWENPGVTQLNRLAAH
Sbjct: 68  LAVVLQRRDWENPGVTQLNRLAAH 91


>UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular
           organisms|Rep: LacZ-alpha peptide - Escherichia coli
          Length = 90

 Score = 54.4 bits (125), Expect = 2e-06
 Identities = 24/24 (100%), Positives = 24/24 (100%)
 Frame = +3

Query: 576 LAVVLQRRDWENPGVTQLNRLAAH 647
           LAVVLQRRDWENPGVTQLNRLAAH
Sbjct: 22  LAVVLQRRDWENPGVTQLNRLAAH 45


>UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: LacZ
           protein - Phage M13mp18
          Length = 102

 Score = 54.4 bits (125), Expect = 2e-06
 Identities = 24/24 (100%), Positives = 24/24 (100%)
 Frame = +3

Query: 576 LAVVLQRRDWENPGVTQLNRLAAH 647
           LAVVLQRRDWENPGVTQLNRLAAH
Sbjct: 26  LAVVLQRRDWENPGVTQLNRLAAH 49


>UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep:
           Beta-galactosidase - Escherichia coli (strain K12)
          Length = 1024

 Score = 54.4 bits (125), Expect = 2e-06
 Identities = 24/24 (100%), Positives = 24/24 (100%)
 Frame = +3

Query: 576 LAVVLQRRDWENPGVTQLNRLAAH 647
           LAVVLQRRDWENPGVTQLNRLAAH
Sbjct: 8   LAVVLQRRDWENPGVTQLNRLAAH 31


>UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: Like
           moricin - Manduca sexta (Tobacco hawkmoth) (Tobacco
           hornworm)
          Length = 248

 Score = 41.5 bits (93), Expect = 0.017
 Identities = 17/20 (85%), Positives = 18/20 (90%)
 Frame = +3

Query: 432 MGNGNHSPSGGPYARLPTRA 491
           MG+GNHSPSG PYA LPTRA
Sbjct: 1   MGDGNHSPSGRPYASLPTRA 20


>UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:
           Beta-galactosidase - Yersinia pseudotuberculosis
          Length = 1066

 Score = 37.9 bits (84), Expect = 0.21
 Identities = 15/24 (62%), Positives = 18/24 (75%)
 Frame = +3

Query: 576 LAVVLQRRDWENPGVTQLNRLAAH 647
           L  +L RRDWENP +TQ +RL AH
Sbjct: 15  LPQILSRRDWENPQITQYHRLEAH 38


>UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1;
           Enterobacter sakazakii ATCC BAA-894|Rep: Putative
           uncharacterized protein - Enterobacter sakazakii ATCC
           BAA-894
          Length = 1043

 Score = 37.5 bits (83), Expect = 0.28
 Identities = 13/24 (54%), Positives = 18/24 (75%)
 Frame = +3

Query: 576 LAVVLQRRDWENPGVTQLNRLAAH 647
           LA +L R DW+NP +T +NRL +H
Sbjct: 18  LATILARNDWQNPAITSVNRLPSH 41


>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 275

 Score = 37.1 bits (82), Expect = 0.37
 Identities = 16/16 (100%), Positives = 16/16 (100%)
 Frame = +1

Query: 523 RGGARYPIRPIVSRIT 570
           RGGARYPIRPIVSRIT
Sbjct: 260 RGGARYPIRPIVSRIT 275


>UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1;
           uncultured bacterium|Rep: Non-ribosomal peptide
           synthetase - uncultured bacterium
          Length = 338

 Score = 33.9 bits (74), Expect = 3.4
 Identities = 18/35 (51%), Positives = 18/35 (51%)
 Frame = -2

Query: 625 WVTPGFSQSRRCKTTASEL*YDSL*GELGTGPPLE 521
           W   GF     C        YDSL GELGTGPPLE
Sbjct: 260 WSKTGFRPF--CLEAGRRAYYDSLYGELGTGPPLE 292


>UniRef50_Q48727 Cluster: Beta-galactosidase; n=3; Lactococcus
           lactis|Rep: Beta-galactosidase - Lactococcus lactis
           subsp. lactis (Streptococcus lactis)
          Length = 998

 Score = 33.5 bits (73), Expect = 4.5
 Identities = 13/21 (61%), Positives = 16/21 (76%)
 Frame = +3

Query: 585 VLQRRDWENPGVTQLNRLAAH 647
           VL+R+DWENP V+  NRL  H
Sbjct: 9   VLERKDWENPVVSNWNRLPMH 29


>UniRef50_P81650 Cluster: Beta-galactosidase; n=26;
           Gammaproteobacteria|Rep: Beta-galactosidase -
           Pseudoalteromonas haloplanktis (Alteromonas
           haloplanktis)
          Length = 1039

 Score = 32.7 bits (71), Expect = 7.9
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +3

Query: 585 VLQRRDWENPGVTQLNRLAAH 647
           ++ RRDWENP   Q+N++ AH
Sbjct: 7   IINRRDWENPITVQVNQVKAH 27


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 657,464,394
Number of Sequences: 1657284
Number of extensions: 12589822
Number of successful extensions: 27845
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 26993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27840
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48955894634
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)