Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0569
         (638 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.70 
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    22   3.8  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    22   3.8  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    22   3.8  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    22   5.0  
AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochr...    22   5.0  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   8.7  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 0.70
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +2

Query: 275 YAFIKLECIVYFKYYNLMIT 334
           YAFI L C+ YF Y  ++ T
Sbjct: 105 YAFIILLCVYYFYYAFIIFT 124


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -1

Query: 506 FLYILNHNEYLFLNDNRGPI 447
           F  +L HN    LN NR P+
Sbjct: 393 FARLLRHNFNRHLNSNRAPL 412


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -1

Query: 506 FLYILNHNEYLFLNDNRGPI 447
           F  +L HN    LN NR P+
Sbjct: 400 FARLLRHNFNRHLNSNRAPL 419


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -3

Query: 543 LILNTTVIYNVNISLYTKPQRI 478
           L+L  +V+ NVN S+Y  P+ +
Sbjct: 205 LLLTMSVLPNVNSSVYYDPRAL 226


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = +1

Query: 34  RYLQRHER*LQHIHRWNTKLVEHPRISRLHR 126
           ++   HE  LQH+H+      E  ++  LH+
Sbjct: 102 KFNPHHEIKLQHLHQSKFNPHEEVKLQHLHQ 132


>AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 124

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -1

Query: 515 MSIFLYILNHNEYLF 471
           +S+F+Y ++HNE  F
Sbjct: 85  LSLFIYGMHHNEKYF 99


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +2

Query: 521 ITVVFSIKIDSITTIRLLCSLLIFY 595
           + V FS+  D++  +  L S+LIF+
Sbjct: 222 VFVCFSLVEDTLPCVFFLGSILIFF 246


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,238
Number of Sequences: 336
Number of extensions: 2614
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)