Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0569
(638 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF460788-1|ABQ10624.1| 1840|Drosophila melanogaster neurexin pro... 31 1.3
BT023898-1|ABA81832.1| 1840|Drosophila melanogaster LP14275p pro... 31 1.3
AE014297-3164|AAF56006.1| 1837|Drosophila melanogaster CG7050-PA... 31 1.3
AF239610-1|AAF63502.1| 1361|Drosophila melanogaster SP2353 protein. 29 5.3
AE013599-2167|AAF58071.2| 1361|Drosophila melanogaster CG8403-PA... 29 5.3
AY089465-1|AAL90203.1| 586|Drosophila melanogaster AT27789p pro... 29 7.0
AE014297-1388|AAN13533.1| 179|Drosophila melanogaster CG6946-PC... 29 7.0
AE014297-1387|AAF54705.1| 586|Drosophila melanogaster CG6946-PB... 29 7.0
AE014297-1386|AAF54704.1| 586|Drosophila melanogaster CG6946-PA... 29 7.0
AY118666-1|AAM50035.1| 791|Drosophila melanogaster SD26855p pro... 28 9.3
AY094641-1|AAM10994.1| 605|Drosophila melanogaster AT09114p pro... 28 9.3
AY060955-1|AAL28503.1| 809|Drosophila melanogaster GM08777p pro... 28 9.3
AE014297-1049|AAF54458.1| 605|Drosophila melanogaster CG8526-PA... 28 9.3
AE014296-3270|AAZ66056.1| 4705|Drosophila melanogaster CG7749-PB... 28 9.3
AE014296-3269|AAF49078.2| 4705|Drosophila melanogaster CG7749-PA... 28 9.3
>EF460788-1|ABQ10624.1| 1840|Drosophila melanogaster neurexin
protein.
Length = 1840
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = +2
Query: 50 MNADSNIYIGGIPS---WLNIHGYPGFIGCIENVETTDSHRGLNLRDTAVAG 196
M + S +Y+GG + L + F+GC+ VE + LNL D A +G
Sbjct: 482 MLSSSRVYVGGAVNPRALLGARVHTNFVGCLRKVEFSADTLNLNLIDLAKSG 533
>BT023898-1|ABA81832.1| 1840|Drosophila melanogaster LP14275p
protein.
Length = 1840
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = +2
Query: 50 MNADSNIYIGGIPS---WLNIHGYPGFIGCIENVETTDSHRGLNLRDTAVAG 196
M + S +Y+GG + L + F+GC+ VE + LNL D A +G
Sbjct: 482 MLSSSRVYVGGAVNPRALLGARVHTNFVGCLRKVEFSADTLNLNLIDLAKSG 533
>AE014297-3164|AAF56006.1| 1837|Drosophila melanogaster CG7050-PA
protein.
Length = 1837
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = +2
Query: 50 MNADSNIYIGGIPS---WLNIHGYPGFIGCIENVETTDSHRGLNLRDTAVAG 196
M + S +Y+GG + L + F+GC+ VE + LNL D A +G
Sbjct: 482 MLSSSRVYVGGAVNPRALLGARVHTNFVGCLRKVEFSADTLNLNLIDLAKSG 533
>AF239610-1|AAF63502.1| 1361|Drosophila melanogaster SP2353 protein.
Length = 1361
Score = 29.1 bits (62), Expect = 5.3
Identities = 12/41 (29%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Frame = +2
Query: 29 ATGISNVMNADSNIYIGGIPS---WLNIHGYPGFIGCIENV 142
A G +N D+ +Y+GG+P + + + G +GCI +
Sbjct: 1295 APGKLRQLNTDTGLYVGGMPDVGYFTHQRYFSGIVGCISEI 1335
>AE013599-2167|AAF58071.2| 1361|Drosophila melanogaster CG8403-PA
protein.
Length = 1361
Score = 29.1 bits (62), Expect = 5.3
Identities = 12/41 (29%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Frame = +2
Query: 29 ATGISNVMNADSNIYIGGIPS---WLNIHGYPGFIGCIENV 142
A G +N D+ +Y+GG+P + + + G +GCI +
Sbjct: 1295 APGKLRQLNTDTGLYVGGMPDVGYFTHQRYFSGIVGCISEI 1335
>AY089465-1|AAL90203.1| 586|Drosophila melanogaster AT27789p
protein.
Length = 586
Score = 28.7 bits (61), Expect = 7.0
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +2
Query: 38 ISNVMNADSNIYIGGIPSWLNIHGYPGFIGCIENVETTDSHRGLNLRDTAVAGRNT 205
I NV + + + G+P W H + +ENV T+ G++L + V G+NT
Sbjct: 41 IENVGESPKFVRLRGLP-WSATH--KEILDFLENVNVTNGSAGIHLVTSRVDGKNT 93
>AE014297-1388|AAN13533.1| 179|Drosophila melanogaster CG6946-PC,
isoform C protein.
Length = 179
Score = 28.7 bits (61), Expect = 7.0
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +2
Query: 38 ISNVMNADSNIYIGGIPSWLNIHGYPGFIGCIENVETTDSHRGLNLRDTAVAGRNT 205
I NV + + + G+P W H + +ENV T+ G++L + V G+NT
Sbjct: 41 IENVGESPKFVRLRGLP-WSATH--KEILDFLENVNVTNGSAGIHLVTSRVDGKNT 93
>AE014297-1387|AAF54705.1| 586|Drosophila melanogaster CG6946-PB,
isoform B protein.
Length = 586
Score = 28.7 bits (61), Expect = 7.0
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +2
Query: 38 ISNVMNADSNIYIGGIPSWLNIHGYPGFIGCIENVETTDSHRGLNLRDTAVAGRNT 205
I NV + + + G+P W H + +ENV T+ G++L + V G+NT
Sbjct: 41 IENVGESPKFVRLRGLP-WSATH--KEILDFLENVNVTNGSAGIHLVTSRVDGKNT 93
>AE014297-1386|AAF54704.1| 586|Drosophila melanogaster CG6946-PA,
isoform A protein.
Length = 586
Score = 28.7 bits (61), Expect = 7.0
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +2
Query: 38 ISNVMNADSNIYIGGIPSWLNIHGYPGFIGCIENVETTDSHRGLNLRDTAVAGRNT 205
I NV + + + G+P W H + +ENV T+ G++L + V G+NT
Sbjct: 41 IENVGESPKFVRLRGLP-WSATH--KEILDFLENVNVTNGSAGIHLVTSRVDGKNT 93
>AY118666-1|AAM50035.1| 791|Drosophila melanogaster SD26855p
protein.
Length = 791
Score = 28.3 bits (60), Expect = 9.3
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 6/45 (13%)
Frame = +2
Query: 29 ATGISNVMNADSN-IYIGG-IPSWLNIHGYP----GFIGCIENVE 145
A G++ ++N SN I++G + +I GY GFIGC+ N++
Sbjct: 401 APGVNGILNIQSNDIFVGAEVRPHPSIIGYEDIQRGFIGCMANIK 445
>AY094641-1|AAM10994.1| 605|Drosophila melanogaster AT09114p
protein.
Length = 605
Score = 28.3 bits (60), Expect = 9.3
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -1
Query: 224 RSLCIAACFDQPQRCLANSILGGCPLSQHSQCNR 123
RS ACF C+ I GCP++ H + NR
Sbjct: 438 RSAMHLACFLGKLNCVCFLISAGCPVNVHDRFNR 471
>AY060955-1|AAL28503.1| 809|Drosophila melanogaster GM08777p
protein.
Length = 809
Score = 28.3 bits (60), Expect = 9.3
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 6/45 (13%)
Frame = +2
Query: 29 ATGISNVMNADSN-IYIGG-IPSWLNIHGYP----GFIGCIENVE 145
A G++ ++N SN I++G + +I GY GFIGC+ N++
Sbjct: 152 APGVNGILNIQSNDIFVGAEVRPHPSIIGYEDIQRGFIGCMANIK 196
>AE014297-1049|AAF54458.1| 605|Drosophila melanogaster CG8526-PA
protein.
Length = 605
Score = 28.3 bits (60), Expect = 9.3
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -1
Query: 224 RSLCIAACFDQPQRCLANSILGGCPLSQHSQCNR 123
RS ACF C+ I GCP++ H + NR
Sbjct: 438 RSAMHLACFLGKLNCVCFLISAGCPVNVHDRFNR 471
>AE014296-3270|AAZ66056.1| 4705|Drosophila melanogaster CG7749-PB,
isoform B protein.
Length = 4705
Score = 28.3 bits (60), Expect = 9.3
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 6/45 (13%)
Frame = +2
Query: 29 ATGISNVMNADSN-IYIGG-IPSWLNIHGYP----GFIGCIENVE 145
A G++ ++N SN I++G + +I GY GFIGC+ N++
Sbjct: 4048 APGVNGILNIQSNDIFVGAEVRPHPSIIGYEDIQRGFIGCMANIK 4092
>AE014296-3269|AAF49078.2| 4705|Drosophila melanogaster CG7749-PA,
isoform A protein.
Length = 4705
Score = 28.3 bits (60), Expect = 9.3
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 6/45 (13%)
Frame = +2
Query: 29 ATGISNVMNADSN-IYIGG-IPSWLNIHGYP----GFIGCIENVE 145
A G++ ++N SN I++G + +I GY GFIGC+ N++
Sbjct: 4048 APGVNGILNIQSNDIFVGAEVRPHPSIIGYEDIQRGFIGCMANIK 4092
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,428,103
Number of Sequences: 53049
Number of extensions: 467976
Number of successful extensions: 862
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 830
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 862
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2682985500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -