Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0567
         (619 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF120979-1|ABO93157.1| 1396|Drosophila melanogaster misfire prot...    30   2.9  
EF120976-1|ABO93154.1| 1437|Drosophila melanogaster misfire prot...    30   2.9  
EF120975-1|ABO93153.1| 1659|Drosophila melanogaster misfire prot...    30   2.9  
AE014296-1535|AAF50355.1| 1782|Drosophila melanogaster CG5747-PA...    30   2.9  

>EF120979-1|ABO93157.1| 1396|Drosophila melanogaster misfire
           protein.
          Length = 1396

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -2

Query: 384 AHRHLQRKCATHFEI*ILRSRYSYNGCPAL 295
           AH HLQ KC   FE+ +     ++NG P+L
Sbjct: 50  AHEHLQWKCVAEFELCL--EEIAFNGTPSL 77


>EF120976-1|ABO93154.1| 1437|Drosophila melanogaster misfire
           protein.
          Length = 1437

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -2

Query: 384 AHRHLQRKCATHFEI*ILRSRYSYNGCPAL 295
           AH HLQ KC   FE+ +     ++NG P+L
Sbjct: 50  AHEHLQWKCVAEFELCL--EEIAFNGTPSL 77


>EF120975-1|ABO93153.1| 1659|Drosophila melanogaster misfire
           protein.
          Length = 1659

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -2

Query: 384 AHRHLQRKCATHFEI*ILRSRYSYNGCPAL 295
           AH HLQ KC   FE+ +     ++NG P+L
Sbjct: 272 AHEHLQWKCVAEFELCL--EEIAFNGTPSL 299


>AE014296-1535|AAF50355.1| 1782|Drosophila melanogaster CG5747-PA
           protein.
          Length = 1782

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -2

Query: 384 AHRHLQRKCATHFEI*ILRSRYSYNGCPAL 295
           AH HLQ KC   FE+ +     ++NG P+L
Sbjct: 234 AHEHLQWKCVAEFELCL--EEIAFNGTPSL 261


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,643,161
Number of Sequences: 53049
Number of extensions: 472511
Number of successful extensions: 955
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 941
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 953
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2538517050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)